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Computational model list

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  Name     
1 A Model of Multiple Spike Initiation Zones in the Leech C-interneuron (Crisp 2009)
2 A Model of Selection between Stimulus and Place Strategy in a Hawkmoth (Balkenius et al. 2004)
3 A cardiac cell simulator (Puglisi and Bers 2001), applied to the QT interval (Busjahn et al 2004)
4 A comparative computer simulation of dendritic morphology (Donohue and Ascoli 2008)
5 A contracting model of the basal ganglia (Girard et al. 2008)
6 A dual-Ca2+-sensor model for neurotransmitter release in a central synapse (Sun et al. 2007)
7 A dynamic model of the canine ventricular myocyte (Hund, Rudy 2004)
8 A dynamical model of the basal ganglia (Leblois et al 2006)
9 A finite volume method for stochastic integrate-and-fire models (Marpeau et al. 2009)
10 A kinetic model unifying presynaptic short-term facilitation and depression (Lee et al. 2009)
11 A method of counting motor units in mice (Major et al 2007)
12 A microcircuit model of the frontal eye fields (Heinzle et al. 2007)
13 A model for interaural time difference sensitivity in the medial superior olive (Zhou et al 2005)
14 A model for pituitary GH(3) lactotroph (Wu and Chang 2005)
15 A model of beta-adrenergic modulation of IKs in the guinea-pig ventricle (Severi et al. 2009)
16 A model of the femur-tibia control system in stick insects (Stein et al. 2008)
17 A network model of tail withdrawal in Aplysia (White et al 1993)
18 A network model of the vertebrate retina (Publio et al. 2009)
19 A neural model of Parkinson`s disease (Cutsuridis and Perantonis 2006, Cutsuridis 2006, 2007)
20 A nicotinic acetylcholine receptor kinetic model (Edelstein et al. 1996)
21 A reinforcement learning example (Sutton and Barto 1998)
22 A simplified model of NMDA oscillations in lamprey locomotor neurons (Huss et al. 2008)
23 A simulation method for the firing sequences of motor units (Jiang et al 2006)
24 A single column thalamocortical network model (Traub et al 2005)
25 A spiking model of cortical broadcast and competition (Shanahan 2008)
26 A theory of ongoing activity in V1 (Goldberg et al 2004)
27 AP initiation and propagation in type II cochlear ganglion cell (Hossain et al 2005)
28 AP shape and parameter constraints in optimization of compartment models (Weaver and Wearne 2006)
29 Action Potential initiation and backpropagation in Neocortical L5 Pyramidal Neuron (Hu et al. 2009)
30 Action potential of adult rat ventricle (Wang et al. 2008)
31 Action potential of striated muscel fiber (Adrian et al 1970)
32 Active dendrites and spike propagation in a hippocampal interneuron (Saraga et al 2003)
33 Activity constraints on stable neuronal or network parameters (Olypher and Calabrese 2007)
34 Activity dependent changes in dendritic spine density and spine structure (Crook et al. 2007)
35 Activity dependent changes in motoneurones (Dai Y et al 2002, Gardiner et al 2002)
36 Activity dependent conductances in a neuron model (Liu et al. 1998)
37 Activity dependent regulation of pacemaker channels by cAMP (Wang et al 2002)
38 Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005)
39 Allosteric gating of K channels (Horrigan et al 1999)
40 Alternative time representation in dopamine models (Rivest et al. 2009)
41 Ambiguous Encoding and Distorted Perception (Carlson and Kawasaki 2006)
42 An allosteric kinetics of NMDARs in STDP (Urakubo et al. 2008)
43 An integrative model of the cardiac ventricular myocytes (Greenstein and Winslow 2002)
44 An oscillatory neural model of multiple object tracking (Kazanovich and Borisyuk 2006)
45 Application of a common kinetic formalism for synaptic models (Destexhe et al 1994)
46 Arteriolar networks: Spread of potential (Crane et al 2001)
47 Artificial neuron model (Izhikevich 2003)
48 Auditory nerve model for predicting performance limits (Heinz et al 2001)
49 Auditory nerve model with linear tuning (Heinz et al 2001)
50 Auditory nerve response model (Tan, Carney 2003)
51 Auditory nerve response model (Zhang et al 2001)
52 Axonal NaV1.6 Sodium Channels in AP Initiation of CA1 Pyramidal Neurons (Royeck et al. 2008)
53 Axonal Projection and Interneuron Types (Helmstaedter et al. 2008)
54 Axonal gap junctions produce fast oscillations in cerebellar Purkinje cells (Traub et al. 2008)
55 Basal ganglia-thalamocortical loop model of action selection (Humphries and Gurney 2002)
56 Biologically-plausible models for spatial navigation (Cannon et al 2003)
57 Biophysical and phenomenological models of spike-timing dependent plasticity (Badoual et al. 2006)
58 Boundary effects influence velocity in transverse propagation of cardiac APs (Sperelakis et al 2005)
59 Breakdown of accmmodation in nerve: a possible role for INAp (Hennings et al 2005)
60 Brette-Gerstner model (Touboul and Brette 2008)
61 Broadening of activity with flow across neural structures (Lytton et al. 2008)
62 Burst induced synaptic plasticity in Apysia sensorimotor neurons (Phares et al 2003)
63 Bursting activity of neuron R15 in Aplysia (Canavier et al 1991, Butera et al 1995)
64 Bursting and resonance in cerebellar granule cells (D'Angelo et al 2001)
65 C elegans pharynx simulation (Avery and Shtonda 2003)
66 CA1 Pyramidal Neuron: Synaptic Scaling (London, Segev 2001)
67 CA1 Pyramidal Neuron: slow Na+ inactivation (Migliore 1996)
68 CA1 interneuron: K currents (Lien et al 2002)
69 CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007)
70 CA1 pyramidal cell: I_NaP and I_M contributions to somatic bursting (Golomb et al 2006)
71 CA1 pyramidal neuron (Migliore et al 1999)
72 CA1 pyramidal neuron synaptic integration (Jarsky et al. 2005)
73 CA1 pyramidal neuron synaptic integration (Li and Ascoli 2006, 2008)
74 CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003)
75 CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000)
76 CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008)
77 CA1 pyramidal neuron: conditional boosting of dendritic APs (Watanabe et al 2002)
78 CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004)
79 CA1 pyramidal neuron: effects of Ih on distal inputs (Migliore et al 2004)
80 CA1 pyramidal neuron: effects of Lamotrigine on dendritic excitability (Poolos et al 2002)
81 CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008)
82 CA1 pyramidal neuron: h channel-dependent deficit of theta oscill. resonance (Marcelin et al. 2008)
83 CA1 pyramidal neuron: integration of subthreshold inputs from PP and SC (Migliore 2003)
84 CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005)
85 CA1 pyramidal neurons: binding properties and the magical number 7 (Migliore et al. 2008)
86 CA1 pyramidal neurons: effects of a Kv7.2 mutation (Miceli et al. 2009)
87 CA3 Pyramidal Neuron (Migliore et al 1995)
88 CA3 pyramidal cell: rhythmogenesis in a reduced Traub model (Pinsky, Rinzel 1994)
89 CA3 pyramidal neuron (Lazarewicz et al 2002)
90 CA3 pyramidal neuron: firing properties (Hemond et al. 2008)
91 CN Octopus Cell: Ih current (Bal, Oertel 2000)
92 CN bushy, stellate neurons (Rothman, Manis 2003)
93 CN pyramidal fusiform cell (Kanold, Manis 2001)
94 CONFIGR: a vision-based model for long-range figure completion (Carpenter et al. 2007)
95 Ca(2+) oscillations based on Ca-induced Ca-release (Dupont et al 1991)
96 Ca-dependent K Channel: kinetics from rat muscle (Moczydlowski, Latorre 1983) NEURON
97 Ca-dependent K Channel: kinetics from rat muscle (Moczydlowski, Latorre 1983) XPP
98 Ca3 pyramidal neuron: membrane response near rest (Hemond et al. 2009)
99 CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007)
100 Caffeine-induced electrical oscillations in Aplysia neurons (Komendantov, Kononenko 2000)
101 Calcium spikes in basal dendrites (Kampa and Stuart 2006)
102 Calyx of Held, short term plasticity (Yang Z et al. 2009)
103 Carbon nanotubes as electrical interfaces to neurons (Giugliano et al. 2008)
104 Cardiac Atrial Cell (Courtemanche et al 1998)
105 Cardiac Atrial Cell (Courtemanche et al 1998) (C++)
106 Cardiac action potential based on Luo-Rudy phase 1 model (Luo and Rudy 1991), (Wu 2004)
107 Cat auditory nerve model (Zilany and Bruce 2006, 2007)
108 Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
109 CellExcite: an efficient simulation environment for excitable cells (Bartocci et al. 2008)
110 Cerebellar Golgi cell (Solinas et al. 2007a, 2007b)
111 Cerebellar Purkinje Cell: resurgent Na current and high frequency firing (Khaliq et al 2003)
112 Cerebellar purkinje cell (De Schutter and Bower 1994)
113 Cerebellar purkinje cell: K and Ca channels regulate APs (Miyasho et al 2001)
114 Cerebellar purkinje cell: interacting Kv3 and Na currents influence firing (Akemann, Knopfel 2006)
115 Channel parameter estimation from current clamp and neuronal properties (Toth, Crunelli 2001)
116 Classic model of the Tritonia Swim CPG (Getting, 1989)
117 Cochlear implant models (Bruce et al. 1999a, b, c, 2000)
118 Code to calc. spike-trig. ave (STA) conduct. from Vm (Pospischil et al. 2007, Rudolph et al. 2007)
119 Coding of stimulus frequency by latency in thalamic networks (Golomb et al 2005)
120 Coincidence detection in avian brainstem (Simon et al 1999)
121 Combination sensitivity and active conductances (Carlson and Kawasaki 2006)
122 Compartmental model of a mitral cell (Popovic et al. 2005)
123 Compartmental models of growing neurites (Graham and van Ooyen 2004)
124 Competition for AP initiation sites in a circuit controlling simple learning (Cruz et al. 2007)
125 Computational Model of a Central Pattern Generator (Cataldo et al 2006)
126 Computational aspects of feedback in neural circuits (Maass et al 2006)
127 Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008)
128 Computer model of clonazepam`s effect in thalamic slice (Lytton 1997)
129 Computer simulations of neuron-glia interactions mediated by ion flux (Somjen et al. 2008)
130 Conditions of dominant effectiveness of distal dendrites (Korogod, Kulagina 1998)
131 Conduction in uniform myelinated axons (Moore et al 1978)
132 Consequences of HERG mutations in the long QT syndrome (Clancy, Rudy 2001)
133 Contibutions of input and history to motoneuron output (Powers et al 2005)
134 Continuum model of tubulin-driven neurite elongation (Graham et al 2006)
135 Contrast invariance by LGN synaptic depression (Banitt et al. 2007)
136 Contribution of ATP-sensitive potassium channels in the neuronal network (Huang et al. 2009)
137 Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007)
138 Cortex learning models (Weber at al. 2006, Weber and Triesch, 2006, Weber and Wermter 2006/7)
139 Cortical network model of posttraumatic epileptogenesis (Bush et al 1999)
140 Current flow during PAP in squid axon at diameter change (Joyner et al 1980)
141 Currents contributing to decision making in neurons B31-B32 of Aplysia (Hurwitz et al. 2008)
142 D2 dopamine receptor modulation of interneuronal activity (Maurice et al. 2004)
143 DG granule cell: I-A model (Beck et al 1992)
144 Data-driven, HH-type model of the lateral pyloric (LP) cell in the STG (Nowotny et al. 2008)
145 Demyelinated and remyelinating axon conductances (Hines, Shrager 1991)
146 Dendritic L-type Ca currents in motoneurons (Carlin et al 2000)
147 Dendritic Na inactivation drives a decrease in ISI (Fernandez et al 2005)
148 Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007)
149 Dendritic processing of excitatory synaptic input in GnRH neurons (Roberts et al. 2006)
150 Dendritic tip geometry effects electrical properties (Tsutsui, Oka 2001)
151 Dendritica (Vetter et al 2001)
152 Dentate Basket Cell: spatial summation of inhibitory synaptic inputs (Bartos et al 2001)
153 Dentate Gyrus Feed-forward inhibition (Ferrante et al. 2009)
154 Dentate gyrus (Morgan et al. 2007, 2008, Santhakumar et al. 2005, Dyhrfjeld-Johnsen et al. 2007)
155 Dentate gyrus granule cell: calcium and calcium-dependent conductances (Aradi and Holmes 1999)
156 Dentate gyrus granule cell: subthreshold signal processing (Schmidt-Hieber et al. 2007)
157 Dentate gyrus network model (Santhakumar et al 2005)
158 Determinants of fast calcium dynamics in dendritic spines and dendrites (Cornelisse et al. 2007)
159 Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites (Golding et al 2001)
160 Differences between type A and B photoreceptors (Blackwell 2006)
161 Differential modulation of pattern and rate in a dopamine neuron model (Canavier and Landry 2006)
162 Discrete event simulation in the NEURON environment (Hines and Carnevale 2004)
163 Distributed computing tool for NEURON, NEURONPM (screensaver) (Calin-Jageman and Katz 2006)
164 Distributed representation of perceptual categories in the auditory cortex (Kim and Bao 2008)
165 Dopaminergic cell bursting model (Kuznetsov et al 2006)
166 Dorsal root ganglion (DRG) neuronal model (Amir, Devor 2003)
167 Drosophila projection neuron electrotonic structure (Gouwens and Wilson 2009)
168 Dynamic dopamine modulation in the basal ganglia: Learning in Parkinson (Frank et al 2004,2005)
169 Dynamical model of olfactory bulb mitral cell (Rubin, Cleland 2006)
170 Dynamics of Spike Initiation (Prescott et al. 2008)
171 ERG current in repolarizing plateau potentials in dopamine neurons (Canavier et al 2007)
172 Effect of riluzole on action potential in cultured human skeletal muscle cells (Wang YJ et al. 2008)
173 Effect of slowly inactivating IKdr to delayed firing of action potentials (Wu et al. 2008)
174 Effect of voltage sensitive fluorescent proteins on neuronal excitability (Akemann et al. 2009)
175 Effects of Acetyl-L-carnitine on neural transmission (Lombardo et al 2004)
176 Effects of KIR current inactivation in NAc Medium Spiny Neurons (Steephen and Manchanda 2009)
177 Effects of synaptic location and timing on synaptic integration (Rall 1964)
178 Efffect of propofol on potassium current in cardiac H9c2 cells (Liu et al. 2008)
179 Efficient Method for Computing Synaptic Conductance (Destexhe et al 1994)
180 Efficient estimation of detailed single-neuron models (Huys et al. 2006)
181 Electrically-coupled Retzius neurons (Vazquez et al. 2009)
182 Elementary mechanisms producing facilitation of Cav2.1 (P/Q-type) channels
183 Emergent properties of networks of biological signaling pathways (Bhalla, Iyengar 1999)
184 Encoding and retrieval in a model of the hippocampal CA1 microcircuit (Cutsuridis et al. 2009)
185 Endothelin action on pituitary latotrophs (Bertram et al. 2006)
186 Enhanced Excitability in Hermissenda: modulation by 5-HT (Cai et al 2003)
187 Ephaptic interactions in olfactory nerve (Bokil et al 2001)
188 Epilepsy may be caused by very small functional changes in ion channels (Thomas et al. 2009)
189 Estimation and Production of Time Intervals (Migliore et al 2001)
190 Evaluation of stochastic diff. eq. approximation of ion channel gating models (Bruce 2009)
191 Excitability of PFC Basal Dendrites (Acker and Antic 2008)
192 Excitability of the soma in central nervous system neurons (Safronov et al 2000)
193 Excitation-contraction coupling/mitochondrial energetics (ECME) model (Cortassa et al. 2006)
194 Excitatory and inhibitory interactions in populations of model neurons (Wilson and Cowan 1972)
195 Experimental and modeling studies of desensitization of P2X3 receptors (Sokolova et al. 2006)
196 Extracellular Action Potential Simulations (Gold et al 2007)
197 FS Striatal interneuron: K currents solve signal-to-noise problems (Kotaleski et al 2006)
198 Facilitation by residual calcium (Stockbridge, Hines 1982)
199 Facilitation model based on bound Ca2+ (Matveev et al. 2006)
200 Facilitation through buffer saturation (Matveev et al. 2004)
201 Fast AMPA receptor signaling (Geiger et al 1997)
202 Fast oscillations in inhibitory networks (Maex, De Schutter 2003)
203 Fast population coding (Huys et al. 2007)
204 Fast-spiking cortical interneuron (Golomb et al. 2007)
205 Febrile seizure-induced modifications to Ih (Chen et al 2001)
206 Feedforward heteroassociative network with HH dynamics (Lytton 1998)
207 Fixed point attractor (Hasselmo et al 1995)
208 Fluctuating synaptic conductances recreate in-vivo-like activity (Destexhe et al 2001)
209 Fly lobular plate VS cell (Borst and Haag 1996, et al. 1997, et al. 1999)
210 Fronto-parietal visuospatial WM model with HH cells (Edin et al 2007)
211 Fully Implicit Parallel Simulation of Single Neurons (Hines et al. 2008)
212 GPi/GPe neuron models (Johnson and McIntyre 2008)
213 Gamma oscillations in hippocampal interneuron networks (Bartos et al 2002)
214 Gamma oscillations in hippocampal interneuron networks (Wang, Buzsaki 1996)
215 Gap junction coupled network of striatal fast spiking interneurons (Hjorth et al. 2009)
216 Gap-junction coupled network activity depends on coupled dendrites diameter (Gansert et al. 2007)
217 Generalized Carnevale-Hines algorithm (van Elburg and van Ooyen 2009)
218 Generating oscillatory bursts from a network of regular spiking neurons (Shao et al. 2009)
219 Geometry-induced features of current transfer in neuronal dendrites (Korogod, Kulagina 1998)
220 Globus pallidus multi-compartmental model neuron with realistic morphology (Gunay et al. 2008)
221 Glutamate diffusion and AMPA receptor activation in the cerebellar glomerulus (Saftenku 2005)
222 HERG K+ channels spike-frequency adaptation (Chiesa et al 1997)
223 High dimensional dynamics and low dimensional readouts in neural microcircuits (Haeusler et al 2006)
224 High frequency oscillations induced in three gap-junction coupled neurons (Tseng et al. 2008)
225 High frequency stimulation of the Subthalamic Nucleus (Rubin and Terman 2004)
226 High-Res. Recordings Using a Real-Time Computational Model of the Electrode (Brette et al. 2008)
227 Hippocampal basket cell gap junction network dynamics (Saraga et al. 2006)
228 Hippocampal context-dependent retrieval (Hasselmo and Eichenbaum 2005)
229 Hippocampus temporo-septal engram shift model (Lytton 1999)
230 Hodgkin-Huxley model of persistent activity in prefrontal cortex neurons (Winograd et al. 2008)
231 Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008)
232 Hodgkin-Huxley simplifed 2D and 3D models (Lundstrom et al. 2009)
233 Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b)
234 Homosynaptic plasticity in the tail withdrawal circuit (TWC) of Aplysia (Baxter and Byrne 2006)
235 Hopfield and Brody model (Hopfield, Brody 2000)
236 Human Attentional Networks: A Connectionist Model (Wang and Fan 2007)
237 Hysteresis in voltage gating of HCN channels (Elinder et al 2006, Mannikko et al 2005)
238 I A in Kenyon cells resemble Shaker currents (Pelz et al 1999)
239 IA and IT interact to set first spike latency (Molineux et al 2005)
240 INa and IKv4.3 heterogeneity in canine LV myocytes (Flaim et al 2006)
241 Ih levels roles in bursting and regular-spiking subiculum pyramidal neurons (van Welie et al 2006)
242 Implementation issues in approximate methods for stochastic Hodgkin-Huxley models (Bruce 2007)
243 Inferring connection proximity in electrically coupled networks (Cali et al. 2007)
244 Information-processing in lamina-specific cortical microcircuits (Haeusler and Maass 2006)
245 Inhibitory control by an integral feedback signal in prefrontal cortex (Miller and Wang 2006)
246 Inner hair cell auditory nerve synapse model (Deligeorges, Mountain 1997)
247 Input Fluctuations effects on f-I curves (Arsiero et al. 2007)
248 Investigation of different targets in deep brain stimulation for Parkinson`s (Pirini et al. 2009)
249 Ion channel modeling with whole cell and a genetic algorithm (Gurkiewicz and Korngreen 2007)
250 Ionic basis of alternans and Timothy Syndrome (Fox et al. 2002), (Zhu and Clancy 2007)
251 Ionic mechanisms of bursting in CA3 pyramidal neurons (Xu and Clancy 2008)
252 Irregular oscillations produced by cyclic recurrent inhibition (Friesen, Friesen 1994)
253 Irregular spiking in NMDA-driven prefrontal cortex neurons (Durstewitz and Gabriel 2006)
254 JitCon: Just in time connectivity for large spiking networks (Lytton et al. 2008)
255 KInNeSS : a modular framework for computational neuroscience (Versace et al. 2008)
256 Kenyon cells in the honeybee (Wustenberg et al 2004)
257 Kinetic NMDA receptor model (Kampa et al 2004)
258 Kinetic properties of voltage gated Na channel (Nayak and Sikdar 2007)
259 Kinetic synaptic models applicable to building networks (Destexhe et al 1998)
260 Kinetics of the P2X7 receptor as expressed in Xenopus oocytes (Riedel et al. 2007a,b)
261 Kv4.3, Kv1.4 encoded K channel in heart cells & tachy. (Winslow et al 1999, Greenstein et al 2000)
262 Kv4.3, Kv1.4 encoded K(+) channel in heart cells (Greenstein et al 2000) (XPP)
263 LTP in cerebellar mossy fiber-granule cell synapses (Saftenku 2002)
264 Laminar connectivity matrix simulation (Weiler et al 2008)
265 Lamprey spinal CPG neuron (Huss et al. 2007)
266 Large cortex model with map-based neurons (Rulkov et al 2004)
267 Lateral dendrodenditic inhibition in the Olfactory Bulb (David et al. 2008)
268 Learning spatial transformations through STDP (Davison, Frégnac 2006)
269 Leech Mechanosensory Neurons: Synaptic Facilitation by Reflected APs (Baccus 1998)
270 Leech S Cell: Modulation of Excitability by Serotonin (Burrell and Crisp 2007)
271 Leech heart interneuron network model (Hill et al 2001, 2002)
272 Linking STDP and Dopamine action to solve the distal reward problem (Izhikevich 2007)
273 Local variable time step method (Lytton, Hines 2005)
274 Loss of phase-locking in non-weakly coupled inhib. networks of type-I neurons (Oh and Matveev 2009)
275 Low Threshold Calcium Currents in TC cells (Destexhe et al 1998)
276 Low dose of dopamine may stimulate prolactin secretion by increasing K currents (Tabak et al. 2006)
277 MEG of Somatosensory Neocortex (Jones et al. 2007)
278 MNTB Neuron: Kv3.1 currents (Wang et al 1998)
279 Mammalian Ventricular Cell (Beeler and Reuter 1977)
280 Mapping function onto neuronal morphology (Stiefel and Sejnowski 2007)
281 Markov models of SCN1A (NaV1.1) applied to abnormal gating and epilepsy (Clancy and Kass 2004)
282 Markovian model for cardiac sodium channel (Clancy, Rudy 2002)
283 Markovian model for single-channel recordings of Ik_1 in ventricular cells (Matsuoka et al 2003)
284 Mechanisms of fast rhythmic bursting in a layer 2/3 cortical neuron (Traub et al 2003)
285 Medial vestibular neuron models (Quadroni and Knopfel 1994)
286 Method of probabilistic principle surfaces (PPS) (Chang and Ghosh 2001)
287 Midbrain dopamine neuron: firing patterns (Canavier 1999)
288 Minimal cell model (Av-Ron et al 1991)
289 Model of DARPP-32 phosphorylation in striatal medium spiny neurons (Lindskog et al. 2006)
290 Model of SK current`s influence on precision in Globus Pallidus Neurons (Deister et al. 2009)
291 Model of calcium oscillations in olfactory cilia (Reidl et al. 2006)
292 Model of cochlear membrane adapted (Peterson, Bogert 1950)
293 Modeling interactions in Aplysia neuron R15 (Yu et al 2004)
294 Modeling temperature changes in AMPAR kinetics (Postlethwaite et al 2007)
295 Modelling reduced excitability in aged CA1 neurons as a Ca-dependent process (Markaki et al. 2005)
296 Models of Na channels from a paper on the PKC control of I Na,P (Baker 2005)
297 Modulation of neuronal synchronization by D4 dopamine receptor-mediated phospholipid methylation
298 Modulation of septo-hippocampal theta activity by GABAA receptors (Hajos et al. 2004)
299 Modulation of temporal integration window (Migliore, Shepherd 2002)
300 Moose/PyMOOSE: interoperable scripting in Python for MOOSE (Ray and Bhalla 2008)
301 Morris-Lecar model of the barnacle giant muscle fiber (Morris, Lecar 1981)
302 Motoneuron simulations for counting motor units (Major and Jones 2005)
303 Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
304 Multimodal stimuli learning in hawkmoths (Balkenius et al. 2008)
305 Multiple mechanisms of short term plasticity at the calyx of Held (Hennig et al. 2008)
306 Multiple modes of a conditional neural oscillator (Epstein, Marder 1990)
307 Multiple modes of inner hair cell stimulation (Mountain, Cody 1999)
308 Multisensory integration in the superior colliculus: a neural network model (Ursino et al. 2009)
309 Multistability of clustered states in a globally inhibitory network (Chandrasekaran et al. 2009)
310 MyFirstNEURON (Houweling, Sejnowski 1997)
311 Myelinated axon conduction velocity (Brill et al 1977)
312 NEUROFIT: fitting HH models to voltage clamp data (Willms 2002)
313 NEURON + Python (Hines et al. 2009)
314 NEURON interfaces to MySQL and the SPUD feature extraction algorithm (Neymotin et al. 2007)
315 NMDA receptor saturation (Chen et al 2001)
316 Na channel mutations in the dentate gyrus (Thomas et al. 2009)
317 Na+ channel dependence of AP initiation in cortical pyramidal neuron (Kole et al. 2008)
318 Nav1.6 sodium channel model in globus pallidus neurons (Mercer et al. 2007)
319 Neocortical Layer I: I-A and I-K (Zhou, Hablitz 1996)
320 Neocortical pyramidal neuron: deep; effects of dopamine (Durstewitz et al 2000)
321 Nerve terminal currents at lizard neuromuscular junction (Lindgren, Moore 1989)
322 Network model of the granular layer of the cerebellar cortex (Maex, De Schutter 1998)
323 Networks of spiking neurons: a review of tools and strategies (Brette et al. 2007)
324 Neural Query System NQS Data-Mining From Within the NEURON Simulator (Lytton 2006)
325 Neural model of frog ventilatory rhythmogenesis (Horcholle-Bossavit and Quenet 2009)
326 Neural model of two-interval discrimination (Machens et al 2005)
327 Neural modeling of an internal clock (Yamazaki and Tanaka 2008)
328 Neuronal population models of intracerebral EEG (Wendling et al. 2005)
329 New and corrected simulations of synaptic facilitation (Matveev et al. 2002)
330 Nigral dopaminergic neurons: effects of ethanol on Ih (Migliore et al. 2008)
331 Nodose sensory neuron (Schild et al. 1994, Schild and Kunze 1997)
332 Novel Na current with slow de-inactivation (Tsutsui, Oka 2002)
333 Numerical Integration of Izhikevich and HH model neurons (Stewart and Bair 2009)
334 O-LM interneuron model (Lawrence et al. 2006)
335 Odor supported place cell model and goal navigation in rodents (Kulvicius et al. 2008)
336 Olfactory Bulb Network (Davison et al 2003)
337 Olfactory Mitral Cell (Bhalla, Bower 1993)
338 Olfactory Mitral Cell (Davison et al 2000)
339 Olfactory Mitral Cell (Shen et al 1999)
340 Olfactory Mitral Cell: I-A and I-K currents (Wang et al 1996)
341 Olfactory Mitral cell: AP initiation modes (Chen et al 2002)
342 Olfactory Periglomerular Cells: I-h kinetics (Cadetti, Belluzzi 2001)
343 Olfactory bulb granule cell: effects of odor deprivation (Saghatelyan et al 2005)
344 Olfactory bulb mitral and granule cell column formation (Migliore et al. 2007)
345 Olfactory bulb mitral and granule cell: dendrodendritic microcircuits (Migliore and Shepherd 2008)
346 Olfactory bulb mitral cell: synchronization by gap junctions (Migliore et al 2005)
347 Olfactory bulb network model of gamma oscillations (Bathellier et al. 2006; Lagier et al. 2007)
348 Olfactory receptor neuron model (Dougherty et al 2005)
349 Optimal deep brain stimulation of the subthalamic nucleus-a computational study (Feng et al. 2007)
350 Oscillating neurons in the cochlear nucleus (Bahmer Langner 2006a, b, and 2007)
351 Oscillation and coding in a proposed NN model of insect olfaction (Horcholle-Bossavit et al. 2007)
352 Oscillations, phase-of-firing coding and STDP: an efficient learning scheme (Masquelier et al. 2009)
353 Oxytocin and VIP involvement in prolactin secretion (Egli et al. 2004,2006, Bertram et al. 2006)
354 Paired turbulence and light effect on calcium increase in Hermissenda (Blackwell 2004)
355 Parallel network simulations with NEURON (Migliore et al 2006)
356 Periodicity in Na channel properties alters model neuron excitability (Majumdar and Sikdar 2007)
357 Permeation and inactivation of CaV1.2 Ca2+ channels (Babich et al. 2007)
358 Persistent synchronized bursting activity in cortical tissues (Golomb et al 2005)
359 Phase oscillator models for lamprey central pattern generators (Varkonyi et al. 2008)
360 Polychronization: Computation With Spikes (Izhikevich 2005)
361 Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004)
362 Prefrontal cortical mechanisms for goal-directed behavior (Hasselmo 2005)
363 Presynaptic calcium dynamics at neuromuscular junction (Stockbridge, Moore 1984)
364 Properties of aconitine-induced block of KDR current in NG108-15 neurons (Lin et al. 2008)
365 Proximal inhibition of Renshaw cells (Bui et al 2005)
366 Pyramidal Neuron Deep, Superficial; Aspiny, Stellate (Mainen and Sejnowski 1996)
367 Pyramidal Neuron Deep: Constrained by experiment (Dyhrfjeld-Johnsen et al. 2005)
368 Pyramidal Neuron Deep: K+ kinetics (Korngreen, Sakmann 2000)
369 Pyramidal Neuron Deep: attenuation in dendrites (Stuart, Spruston 1998)
370 Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
371 Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2006)
372 Pyramidal neurons switch from integrators to resonators (Prescott et al. 2008)
373 Pyramidal neurons: IKHT offsets activation of IKLT to increase gain (Fernandez et al 2005)
374 Python demo of the VmT method to extract conductances from single Vm traces (Pospischil et al. 2009)
375 Quantal neurotransmitter release kinetics with fixed and mobile Ca2+ buffers (Gilmanov et al. 2008)
376 Rat α7 nAChR desensitization is modulated by W55 (Gay et al. 2008)
377 Rat phrenic motor neuron (Amini et al 2004)
378 Rat subthalamic projection neuron (Gillies and Willshaw 2006)
379 Reciprocal regulation of rod and cone synapse by NO (Kourennyi et al 2004)
380 Recording from rod bipolar axon terminals in situ (Oltedal et al 2007)
381 Reduction of nonlinear ODE systems possessing multiple scales (Clewley et al. 2005)
382 Regulation of KCNQ2/KCNQ3 current by G protein cycling (Suh et al 2004)
383 Regulation of a slow STG rhythm (Nadim et al 1998)
384 Regulation of the firing pattern in dopamine neurons (Komendantov et al 2004)
385 Rejuvenation model of dopamine neuron (Chan et al. 2007)
386 Response properties of neocort. neurons to temporally modulated noisy inputs (Koendgen et al. 2008)
387 Retinal Ganglion Cell: I-A (Benison et al 2001)
388 Retinal Ganglion Cell: I-CaN and I-CaL (Benison et al. 2001)
389 Retinal Ganglion Cell: I-K (Skaliora et al 1995)
390 Retinal Ganglion Cell: I-Na,t (Benison et al 2001)
391 Retinal Photoreceptor: I Potassium (Beech, Barnes 1989)
392 Reverse-time correlation analysis for idealized orientation tuning dynamics (Kovacic et al. 2008)
393 Reward modulated STDP (Legenstein et al. 2008)
394 Ribbon Synapse (Sikora et al 2005)
395 Robust Reservoir Generation by Correlation-Based Learning (Yamazaki & Tanaka 2008)
396 Rod photoreceptor (Barnes and Hille 1989, Publio et al. 2006, Kourennyi and Liu et al. 2004)
397 Role of KCNQ1 and IKs in cardiac repolarization (Silva, Rudy 2005)
398 Role of KCNQ1 and IKs in cardiac repolarization (Silva, Rudy 2005) (XPP)
399 Role of active dendrites in rhythmically-firing neurons (Goldberg et al 2006)
400 Roles of I(A) and morphology in AP prop. in CA1 pyramidal cell dendrites (Acker and White 2007)
401 Roles of subthalamic nucleus and DBS in reinforcement conflict-based decision making (Frank 2006)
402 S cell network (Moss et al 2005)
403 STDP and NMDAR Subunits (Gerkin et al. 2007)
404 STDP depends on dendritic synapse location (Letzkus et al. 2006)
405 STDP promotes synchrony of inhibitory networks in the presence of heterogeneity (Talathi et al 2008)
406 Salamander retinal ganglian cells: morphology influences firing (Sheasby, Fohlmeister 1999)
407 Salamander retinal ganglion cell: ion channels (Fohlmeister, Miller 1997)
408 Scaling self-organizing maps to model large cortical networks (Bednar et al 2004)
409 Self-influencing synaptic plasticity (Tamosiunaite et al. 2007)
410 Serotonergic modulation of Aplysia sensory neurons (Baxter et al 1999)
411 Short term plasticity of synapses onto V1 layer 2/3 pyramidal neuron (Varela et al 1997)
412 Signal integration in LGN cells (Briska et al 2003)
413 Signal integration in a CA1 pyramidal cell (Graham 2001)
414 Simple model of barrel-specific segregation in cortex (Lu et al 2006)
415 Simulated light response in rod photoreceptors (Liu and Kourennyi 2004)
416 Simulation study of Andersen-Tawil syndrome (Sung et al 2006)
417 Simulation system of spinal cord motor nuclei and assoc. nerves and muscles (Cisi and Kohn 2008)
418 Site of impulse initiation in a neuron (Moore et al 1983)
419 Sleep-wake transitions in corticothalamic system (Bazhenov et al 2002)
420 Slow wave propagation in the guinea-pig gastric antrum (Hirst et al. 2006, Edwards and Hirst 2006)
421 Small world networks of Type I and Type II Excitable Neurons (Bogaard et al. 2009)
422 Sodium channel mutations causing generalized epilepsy with febrile seizures + (Barela et al. 2006)
423 Sodium currents activate without a delay (Baranauskas and Martina 2006)
424 Sodium potassium ATPase pump (Chapman et al. 1983)
425 Software for teaching neurophysiology of neuronal circuits (Grisham et al. 2008)
426 Space clamp problems in neurons with voltage-gated conductances (Bar-Yehuda and Korngreen 2008)
427 Sparsely connected networks of spiking neurons (Brunel 2000)
428 Spatial gridding and temporal accuracy in NEURON (Hines and Carnevale 2001)
429 Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995)
430 Spike Response Model simulator (Jolivet et al. 2004, 2006, 2008)
431 Spike frequency adaptation in spinal sensory neurones (Melnick et al 2004)
432 Spike frequency adaptation in the LGMD (Peron and Gabbiani 2009)
433 Spike propagation and bouton activation in terminal arborizations (Luscher, Shiner 1990)
434 Spike timing detection in different forms of LTD (Doi et al 2005)
435 Spike trains in Hodgkin–Huxley model and ISIs of acupuncture manipulations (Wang et al. 2008)
436 Spikes,synchrony,and attentive learning by laminar thalamocort. circuits (Grossberg & Versace 2007)
437 Spiking neuron model of the basal ganglia (Humphries et al 2006)
438 Spinal Motor Neuron (Dodge, Cooley 1973)
439 Spinal Motor Neuron (McIntyre et al 2002)
440 Spinal Motor Neuron: Na, K_A, and K_DR currents (Safronov, Vogel 1995)
441 Spine fusion and branching effects synaptic response (Rusakov et al 1996, 1997)
442 Spine neck plasticity controls postsynaptic calcium signals (Grunditz et al. 2008)
443 Spiny neuron model with dopamine-induced bistability (Gruber et al 2003)
444 Spontaneous calcium oscillations in astrocytes (Lavrentovich and Hemkin 2008)
445 Spontaneous firing caused by stochastic channel gating (Chow, White 1996)
446 Squid axon (Hodgkin, Huxley 1952) (LabAXON)
447 Squid axon (Hodgkin, Huxley 1952) (NEURON)
448 Squid axon (Hodgkin, Huxley 1952) (SNNAP)
449 Squid axon (Hodgkin, Huxley 1952) (XML, XPP)
450 Stability of complex spike timing-dependent plasticity in cerebellar learning (Roberts 2007)
451 Steady-state Vm distribution of neurons subject to synaptic noise (Rudolph, Destexhe 2005)
452 Stochastic Ih and Na-channels in pyramidal neuron dendrites (Kole et al 2006)
453 Stochastic LTP/LTD conditioning of a synapse (Migliore and Lansky 1999)
454 Stochastic automata network Markov model descriptors of coupled Ca2+ channels (Nguyen et al. 2005)
455 Studies of stimulus parameters for seizure disruption using NN simulations (Anderson et al. 2007)
456 Study of augmented Rubin and Terman 2004 deep brain stim. model in Parkinsons (Pascual et al. 2006)
457 Submyelin Potassium accumulation in Subthalamic neuron (STN) axons (Bellinger et al. 2008)
458 Subthreshold inact. of K channels modulates APs in bitufted interneurons (Korngreen et al 2005)
459 Sympathetic neuron (Wheeler et al 2004)
460 Synaptic integration in a model of granule cells (Gabbiani et al 1994)
461 Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009)
462 Synaptic integration of an identified nonspiking interneuron in crayfish (Takashima et al 2006)
463 Synaptic plasticity can produce and enhance direction selectivity (Carver et al, 2008)
464 Synaptic plasticity: pyramid->pyr and pyr->interneuron (Tsodyks et al 1998)
465 Synaptic transmission at the calyx of Held (Graham et al 2001)
466 Synergistic inhibitory action of oxcarbazepine on INa and IK (Huang et al. 2008)
467 Systems-level modeling of neuronal circuits for leech swimming (Zheng et al. 2007)
468 T channel currents (Vitko et al 2005)
469 T-type Ca current in thalamic neurons (Wang et al 1991)
470 T-type Calcium currents (McRory et al 2001)
471 TTX-R Na+ current effect on cell response (Herzog et al 2001)
472 TTX-R Na+ current effect on cell response (Herzog et al 2001) (MATLAB)
473 Tag Trigger Consolidation (Clopath and Ziegler et al. 2008)
474 Temperature-Sensitive conduction at axon branch points (Westerfield et al 1978)
475 Temporal decorrelation by intrinsic cellular dynamics (Wang et al 2003)
476 Temporal integration by stochastic recurrent network (Okamoto et al. 2007)
477 Thalamic Relay Neuron: I-T current (Williams, Stuart 2000)
478 Thalamic Relay Neuron: I-h (McCormick, Pape 1990)
479 Thalamic Reticular Network (Destexhe et al 1994)
480 Thalamic interneuron multicompartment model (Zhu et al. 1999)
481 Thalamic neuron: Modeling rhythmic neuronal activity (Meuth et al. 2005)
482 Thalamic quiescence of spike and wave seizures (Lytton et al 1997)
483 Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996)
484 Thalamic transformation of pallidal input (Hadipour-Niktarash 2006)
485 Thalamocortical and Thalamic Reticular Network (Destexhe et al 1996)
486 Thalamocortical augmenting response (Bazhenov et al 1998)
487 Thalamocortical model of spike and wave seizures (Suffczynski et al. 2004)
488 The activity phase of postsynaptic neurons (Bose et al 2004)
489 The role of ATP-sensitive potassium channels in a hippocampal neuron (Huang et al. 2007)
490 The virtual slice setup (Lytton et al. 2008)
491 Theta phase precession in a model CA3 place cell (Baker and Olds 2007)
492 Tight junction model of CNS myelinated axons (Devaux and Gow 2008)
493 Tonic firing in substantia gelatinosa neurons (Melnick et al 2004)
494 Tonic neuron in spinal lamina I: prolongation of subthreshold depol. (Prescott and De Koninck 2005)
495 Tonic-clonic transitions in a seizure simulation (Lytton and Omurtag 2007)
496 Touch Sensory Cells (T Cells) of the Leech (Cataldo et al. 2004) (Scuri et al. 2007)
497 Transfer properties of Neuronal Dendrites (Korogod et al 1998)
498 Translating network models to parallel hardware in NEURON (Hines and Carnevale 2008)
499 Transmitter release and Ca diffusion models (Yamada and Zucker 1992)
500 Turtle visual cortex model (Nenadic et al. 2003, Wang et al. 2005, Wang et al. 2006)
501 Two-cell inhibitory network bursting dynamics captured in a one-dimensional map (Matveev et al 2007)
502 Updated Tritonia Swim CPG (Calin-Jagemann et al. 2007)
503 Ventricular cell model (Guinea-pig-type) (Luo, Rudy 1991, +10 other papers!)
504 Vesicular pool simulations of synaptic depression (Aristizabal and Glavinovic 2004)
505 Virtual Retina: biological retina simulator, with contrast gain control (Wohrer and Kornprobst 2009)
506 Visual Cortex Neurons: Dendritic computations (Archie, Mel 2000)
507 Visual Cortex Neurons: Dendritic study (Anderson et al 1999)
508 Voltage attenuation in CA1 pyramidal neuron dendrites (Golding et al 2005)
509 Vomeronasal sensory neuron (Shimazaki et al 2006)
510 Working memory circuit with branched dendrites (Morita 2008)
511 Xenopus Myelinated Neuron (Frankenhaeuser, Huxley 1964)
512 Zonisamide-induced inhibition of the firing of APs in hippocampal neurons (Huang et al. 2007)



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