ModelDB: Models that contain the Model Topic : Detailed Neuronal Models

Models that contain the Model Topic : Detailed Neuronal Models

(Detailed neuronal models typically contain reconstrcuted cell morphologies and intrinsic or synaptic currents that were experimentally measured.)

Models
A detailed and fast model of extracellular recordings (Camunas-Mesa & Qurioga 2013)
A model of the femur-tibia control system in stick insects (Stein et al. 2008)
A multi-compartment model for interneurons in the dLGN (Halnes et al. 2011)
A set of reduced models of layer 5 pyramidal neurons (Bahl et al. 2012)
A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2010)
AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008)
Active dendrites and spike propagation in a hippocampal interneuron (Saraga et al 2003)
Alcohol excites Cerebellar Golgi Cells by inhibiting the Na+/K+ ATPase (Botta et al.2010)
Amyloid beta (IA block) effects on a model CA1 pyramidal cell (Morse et al. 2010)
CA1 Pyramidal Neuron: slow Na+ inactivation (Migliore 1996)
CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007)
CA1 pyramidal neuron (Migliore et al 1999)
CA1 pyramidal neuron synaptic integration (Jarsky et al. 2005)
CA1 pyramidal neuron synaptic integration (Li and Ascoli 2006, 2008)
CA1 pyramidal neuron to study INaP properties and repetitive firing (Uebachs et al. 2010)
CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003)
CA1 pyramidal neuron: Ih current (Migliore et al. 2012)
CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008)
CA1 pyramidal neuron: conditional boosting of dendritic APs (Watanabe et al 2002)
CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004)
CA1 pyramidal neuron: effects of Ih on distal inputs (Migliore et al 2004)
CA1 pyramidal neuron: effects of Lamotrigine on dendritic excitability (Poolos et al 2002)
CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008)
CA1 pyramidal neuron: h channel-dependent deficit of theta oscill. resonance (Marcelin et al. 2008)
CA1 pyramidal neuron: integration of subthreshold inputs from PP and SC (Migliore 2003)
CA1 pyramidal neuron: rebound spiking (Ascoli et al.2010)
CA1 pyramidal neuron: schizophrenic behavior (Migliore et al. 2011)
CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005)
CA1 pyramidal neurons: binding properties and the magical number 7 (Migliore et al. 2008)
CA1 pyramidal neurons: effects of Alzheimer (Culmone and Migliore 2012)
CA1 pyramidal neurons: effects of a Kv7.2 mutation (Miceli et al. 2009)
CA1 pyramidal: Stochastic amplification of KCa in Ca2+ microdomains (Stanley et al. 2011)
CA1 stratum radiatum interneuron multicompartmental model (Katona et al. 2011)
CA3 Pyramidal Neuron (Migliore et al 1995)
CA3 pyramidal neuron (Lazarewicz et al 2002)
CA3 pyramidal neuron (Safiulina et al. 2010)
CA3 pyramidal neuron: firing properties (Hemond et al. 2008)
Ca1 pyramidal neuron: reduction model (Marasco et al. 2012)
CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007)
Cerebellar Nucleus Neuron (Steuber, Schultheiss, Silver, De Schutter & Jaeger, 2010)
Cerebellar gain and timing control model (Yamazaki & Tanaka 2007)(Yamazaki & Nagao 2012)
Cerebellar purkinje cell (De Schutter and Bower 1994)
Cerebellar purkinje cell: K and Ca channels regulate APs (Miyasho et al 2001)
Chirp stimulus responses in a morphologically realistic model (Narayanan and Johnston, 2007)
Coincidence detection in avian brainstem (Simon et al 1999)
Complex CA1-neuron to study AP initiation (Wimmer et al. 2010)
Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007)
Cortical network model of posttraumatic epileptogenesis (Bush et al 1999)
Dendritic L-type Ca currents in motoneurons (Carlin et al 2000)
Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007)
Dendritic signals command firing dynamics in a Cerebellar Purkinje Cell model (Genet et al. 2010)
Dendritica (Vetter et al 2001)
Dentate Basket Cell: spatial summation of inhibitory synaptic inputs (Bartos et al 2001)
Detailed passive cable model of Dentate Gyrus Basket Cells (Norenberg et al. 2010)
Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites (Golding et al 2001)
Differential modulation of pattern and rate in a dopamine neuron model (Canavier and Landry 2006)
Dorsal root ganglion (DRG) neuronal model (Amir, Devor 2003)
Emergent properties of networks of biological signaling pathways (Bhalla, Iyengar 1999)
Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010)
Excitability of PFC Basal Dendrites (Acker and Antic 2008)
FS Striatal interneuron: K currents solve signal-to-noise problems (Kotaleski et al 2006)
Fast AMPA receptor signaling (Geiger et al 1997)
Gap junction coupled network of striatal fast spiking interneurons (Hjorth et al. 2009)
Globus pallidus multi-compartmental model neuron with realistic morphology (Gunay et al. 2008)
Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010)
Impact of dendritic atrophy on intrinsic and synaptic excitability (Narayanan & Chattarji, 2010)
Impact of dendritic size and topology on pyramidal cell burst firing (van Elburg and van Ooyen 2010)
Interacting synaptic conductances during, distorting, voltage clamp (Poleg-Polsky and Diamond 2011)
Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
KV1 channel governs cerebellar output to thalamus (Ovsepian et al. 2013)
L5b PC model constrained for BAC firing and perisomatic current step firing (Hay et al., 2011)
Lamprey spinal CPG neuron (Huss et al. 2007)
Large scale model of the olfactory bulb (Yu et al., 2013)
Layer V PFC pyramidal neuron used to study persistent activity (Sidiropoulou & Poirazi 2012)
Leech Mechanosensory Neurons: Synaptic Facilitation by Reflected APs (Baccus 1998)
Linear vs non-linear integration in CA1 oblique dendrites (Gómez González et al. 2011)
Low Threshold Calcium Currents in TC cells (Destexhe et al 1998)
Mechanisms of fast rhythmic bursting in a layer 2/3 cortical neuron (Traub et al 2003)
Mechanisms of very fast oscillations in axon networks coupled by gap junctions (Munro, Borgers 2010)
Modeling interactions in Aplysia neuron R15 (Yu et al 2004)
Modeling temperature changes in AMPAR kinetics (Postlethwaite et al 2007)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
MyFirstNEURON (Houweling, Sejnowski 1997)
NAcc medium spiny neuron: effects of cannabinoid withdrawal (Spiga et al. 2010)
Neocort. pyramidal cells subthreshold somatic voltage controls spike propagation (Munro Kopell 2012)
Nigral dopaminergic neurons: effects of ethanol on Ih (Migliore et al. 2008)
Nonlinear dendritic processing in barrel cortex spiny stellate neurons (Lavzin et al. 2012)
Numerical Integration of Izhikevich and HH model neurons (Stewart and Bair 2009)
O-LM interneuron model (Lawrence et al. 2006)
Olfactory Mitral Cell (Bhalla, Bower 1993)
Olfactory bulb mitral and granule cell column formation (Migliore et al. 2007)
Olfactory bulb mitral and granule cell: dendrodendritic microcircuits (Migliore and Shepherd 2008)
Paradoxical GABA-mediated excitation (Lewin et al. 2012)
Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011)
Proximal inhibition of Renshaw cells (Bui et al 2005)
Pyramidal Neuron Deep, Superficial; Aspiny, Stellate (Mainen and Sejnowski 1996)
Rapid desynchronization of an electrically coupled Golgi cell network (Vervaeke et al. 2010)
Regulation of the firing pattern in dopamine neurons (Komendantov et al 2004)
Rhesus Monkey Layer 3 Pyramidal Neurons: V1 vs PFC (Amatrudo, Weaver et al. 2012)
Salamander retinal ganglian cells: morphology influences firing (Sheasby, Fohlmeister 1999)
Salamander retinal ganglion cell: ion channels (Fohlmeister, Miller 1997)
Space clamp problems in neurons with voltage-gated conductances (Bar-Yehuda and Korngreen 2008)
Spatial summation of excitatory and inhibitory inputs in pyramidal neurons (Hao et al. 2010)
Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995)
Spike propagation and bouton activation in terminal arborizations (Luscher, Shiner 1990)
Spiking GridPlaceMap model (Pilly & Grossberg, PLoS One, 2013)
Spine fusion and branching effects synaptic response (Rusakov et al 1996, 1997)
Stochastic 3D model of neonatal rat spinal motoneuron (Ostroumov 2007)
Stochastic ion channels and neuronal morphology (Cannon et al. 2010)
Synaptic integration in a model of granule cells (Gabbiani et al 1994)
Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009)
Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996)
Theta phase precession in a model CA3 place cell (Baker and Olds 2007)
Transfer properties of Neuronal Dendrites (Korogod et al 1998)
Voltage attenuation in CA1 pyramidal neuron dendrites (Golding et al 2005)

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