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Models that contain the Modeling Application : Neuron (Home Page)

(NEURON is a simulation environment for developing and exercising models of neurons and networks of neurons. It is particularly well-suited to problems where cable properties of cells play an important role, possibly including extracellular potential close to the membrane), and where cell membrane properties are complex, involving many ion-specific channels, ion accumulation, and second messengers. It evolved from a long collaboration between Michael Hines and John W. Moore at the Department of Neurobiology, Duke University. Their express goal was to create a tool designed specifically for solving the equations that describe nerve cells.)

   Models
A Fast Rhythmic Bursting Cell: in vivo cell modeling (Lee 2007)
A detailed and fast model of extracellular recordings (Camunas-Mesa & Qurioga 2013)
A fast model of voltage-dependent NMDA Receptors (Moradi et al. 2012)
A model for interaural time difference sensitivity in the medial superior olive (Zhou et al 2005)
A model of unitary responses from A/C and PP synapses in CA3 pyramidal cells (Baker et al. 2010)
A multi-compartment model for interneurons in the dLGN (Halnes et al. 2011)
A network model of the vertebrate retina (Publio et al. 2009)
A set of reduced models of layer 5 pyramidal neurons (Bahl et al. 2012)
A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2010)
A single column thalamocortical network model (Traub et al 2005)
A two-layer biophysical olfactory bulb model of cholinergic neuromodulation (Li and Cleland 2013)
AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008)
AP initiation and propagation in type II cochlear ganglion cell (Hossain et al 2005)
AP shape and parameter constraints in optimization of compartment models (Weaver and Wearne 2006)
Accurate and fast simulation of channel noise in conductance-based model neurons (Linaro et al 2011)
Action Potential initiation and backpropagation in Neocortical L5 Pyramidal Neuron (Hu et al. 2009)
Action potential reconstitution from measured current waveforms (Alle et al. 2009)
Action potential-evoked Na+ influx are similar in axon and soma (Fleidervish et al. 2010)
Active dendrites and spike propagation in a hippocampal interneuron (Saraga et al 2003)
Active dendritic action potential propagation (Casale & McCormick 2011)
Activity dependent conductances in a neuron model (Liu et al. 1998)
Activity dependent regulation of pacemaker channels by cAMP (Wang et al 2002)
Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005)
Alcohol excites Cerebellar Golgi Cells by inhibiting the Na+/K+ ATPase (Botta et al.2010)
Altered complexity in layer 2/3 pyramidal neurons (Luuk van der Velden et al. 2012)
Amyloid beta (IA block) effects on a model CA1 pyramidal cell (Morse et al. 2010)
Amyloid-beta effects on release probability and integration at CA3-CA1 synapses (Romani et al. 2013)
Application of a common kinetic formalism for synaptic models (Destexhe et al 1994)
Arteriolar networks: Spread of potential (Crane et al 2001)
Artificial neuron model (Izhikevich 2003)
Availability of low-threshold Ca2+ current in retinal ganglion cells (Lee SC et al. 2003)
Axonal NaV1.6 Sodium Channels in AP Initiation of CA1 Pyramidal Neurons (Royeck et al. 2008)
BCM-like synaptic plasticity with conductance-based models (Narayanan Johnston, 2010)
Balance of excitation and inhibition (Carvalho and Buonomano 2009)
Basal ganglia network model of subthalamic deep brain stimulation (Hahn and McIntyre 2010)
Biophysical and phenomenological models of spike-timing dependent plasticity (Badoual et al. 2006)
Biophysically realistic neural modeling of the MEG mu rhythm (Jones et al. 2009)
Boolean network-based analysis of the apoptosis network (Mai and Liu 2009)
Broadening of activity with flow across neural structures (Lytton et al. 2008)
Bursting and resonance in cerebellar granule cells (D'Angelo et al 2001)
Bursting respiratory net: clustered architecture gives large phase diff`s (Fietkiewicz et al 2011)
CA1 Pyramidal Neuron: slow Na+ inactivation (Migliore 1996)
CA1 interneuron: K currents (Lien et al 2002)
CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007)
CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
CA1 pyramidal neuron (Migliore et al 1999)
CA1 pyramidal neuron synaptic integration (Li and Ascoli 2006, 2008)
CA1 pyramidal neuron to study INaP properties and repetitive firing (Uebachs et al. 2010)
CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003)
CA1 pyramidal neuron: Ih current (Migliore et al. 2012)
CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000)
CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008)
CA1 pyramidal neuron: conditional boosting of dendritic APs (Watanabe et al 2002)
CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004)
CA1 pyramidal neuron: depolarization block (Bianchi et al. 2012)
CA1 pyramidal neuron: effects of Ih on distal inputs (Migliore et al 2004)
CA1 pyramidal neuron: effects of Lamotrigine on dendritic excitability (Poolos et al 2002)
CA1 pyramidal neuron: effects of R213Q and R312W Kv7.2 mutations (Miceli et al. 2013)
CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008)
CA1 pyramidal neuron: h channel-dependent deficit of theta oscill. resonance (Marcelin et al. 2008)
CA1 pyramidal neuron: integration of subthreshold inputs from PP and SC (Migliore 2003)
CA1 pyramidal neuron: rebound spiking (Ascoli et al.2010)
CA1 pyramidal neuron: schizophrenic behavior (Migliore et al. 2011)
CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005)
CA1 pyramidal neuron: synaptically-induced bAP predicts synapse location (Sterratt et al. 2012)
CA1 pyramidal neurons: binding properties and the magical number 7 (Migliore et al. 2008)
CA1 pyramidal neurons: effects of Alzheimer (Culmone and Migliore 2012)
CA1 pyramidal neurons: effects of Kv7 (M-) channels on synaptic integration (Shah et al. 2011)
CA1 pyramidal neurons: effects of a Kv7.2 mutation (Miceli et al. 2009)
CA1 stratum radiatum interneuron multicompartmental model (Katona et al. 2011)
CA3 Pyramidal Neuron (Migliore et al 1995)
CA3 pyramidal cell: rhythmogenesis in a reduced Traub model (Pinsky, Rinzel 1994)
CA3 pyramidal neuron (Lazarewicz et al 2002)
CA3 pyramidal neuron (Safiulina et al. 2010)
CA3 pyramidal neuron: firing properties (Hemond et al. 2008)
CN Octopus Cell: Ih current (Bal, Oertel 2000)
CN bushy, stellate neurons (Rothman, Manis 2003)
CN pyramidal fusiform cell (Kanold, Manis 2001)
Ca-dependent K Channel: kinetics from rat muscle (Moczydlowski, Latorre 1983) NEURON
Ca1 pyramidal neuron: reduction model (Marasco et al. 2012)
Ca3 pyramidal neuron: membrane response near rest (Hemond et al. 2009)
Calcium and potassium currents of olfactory bulb juxtaglomerular cells (Masurkar and Chen 2011)
Calcium spikes in basal dendrites (Kampa and Stuart 2006)
Calcium waves in neuroblastoma cells (Fink et al. 2000)
Carbon nanotubes as electrical interfaces to neurons (Giugliano et al. 2008)
Cardiac Atrial Cell (Courtemanche et al 1998)
Cardiac action potentials and pacemaker activity of sinoatrial node (DiFrancesco & Noble 1985)
Cardiac sarcomere dynamics (Negroni and Lascano 1996)
Cell splitting in neural networks extends strong scaling (Hines et al. 2008)
Cerebellar Golgi cell (Solinas et al. 2007a, 2007b)
Cerebellar Purkinje Cell: resurgent Na current and high frequency firing (Khaliq et al 2003)
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellar purkinje cell: K and Ca channels regulate APs (Miyasho et al 2001)
Cerebellar purkinje cell: interacting Kv3 and Na currents influence firing (Akemann, Knopfel 2006)
Chirp stimulus responses in a morphologically realistic model (Narayanan and Johnston, 2007)
Classic model of the Tritonia Swim CPG (Getting, 1989)
Coincidence detection in avian brainstem (Simon et al 1999)
Compartmental model of a mitral cell (Popovic et al. 2005)
Compartmentalization of GABAergic inhibition by dendritic spines (Chiu et al. 2013)
Competition for AP initiation sites in a circuit controlling simple learning (Cruz et al. 2007)
Complex CA1-neuron to study AP initiation (Wimmer et al. 2010)
Computational Surgery (Lytton et al. 2011)
Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008)
Computer model of clonazepam`s effect in thalamic slice (Lytton 1997)
Computer simulations of neuron-glia interactions mediated by ion flux (Somjen et al. 2008)
Conditions of dominant effectiveness of distal dendrites (Korogod, Kulagina 1998)
Conduction in uniform myelinated axons (Moore et al 1978)
Contrast invariance by LGN synaptic depression (Banitt et al. 2007)
Controlling KCa channels with different Ca2+ buffering models in Purkinje cell (Anwar et al. 2010)
Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007)
Cortical network model of posttraumatic epileptogenesis (Bush et al 1999)
Current flow during PAP in squid axon at diameter change (Joyner et al 1980)
D2 dopamine receptor modulation of interneuronal activity (Maurice et al. 2004)
DG granule cell: I-A model (Beck et al 1992)
Demyelinated and remyelinating axon conductances (Hines, Shrager 1991)
Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010)
Dendritic L-type Ca currents in motoneurons (Carlin et al 2000)
Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007)
Dendritic signals command firing dynamics in a Cerebellar Purkinje Cell model (Genet et al. 2010)
Dendritic tip geometry effects electrical properties (Tsutsui, Oka 2001)
Dendro-dendritic synaptic circuit (Shepherd Brayton 1979)
Dentate Basket Cell: spatial summation of inhibitory synaptic inputs (Bartos et al 2001)
Dentate Gyrus Feed-forward inhibition (Ferrante et al. 2009)
Dentate gyrus (Morgan et al. 2007, 2008, Santhakumar et al. 2005, Dyhrfjeld-Johnsen et al. 2007)
Dentate gyrus granule cell: calcium and calcium-dependent conductances (Aradi and Holmes 1999)
Dentate gyrus granule cell: subthreshold signal processing (Schmidt-Hieber et al. 2007)
Dentate gyrus network model (Santhakumar et al 2005)
Detailed passive cable model of Dentate Gyrus Basket Cells (Norenberg et al. 2010)
Differential modulation of pattern and rate in a dopamine neuron model (Canavier and Landry 2006)
Direct recruitment of S1 interneurons via ICMS (Overstreet and Helms Tillery, submitted)
Direct recruitment of S1 pyramidal neurons via ICMS (Overstreet et al., submitted)
Discrete event simulation in the NEURON environment (Hines and Carnevale 2004)
Dorsal root ganglion (DRG) neuronal model (Amir, Devor 2003)
Dorsal root ganglion (DRG) neuronal model (Kovalsky et al. 2009)
Drosophila projection neuron electrotonic structure (Gouwens and Wilson 2009)
Duration-tuned neurons from the inferior colliculus of vertebrates (Aubie et al. 2012)
Dynamical model of olfactory bulb mitral cell (Rubin, Cleland 2006)
Effect of voltage sensitive fluorescent proteins on neuronal excitability (Akemann et al. 2009)
Effects of Chloride accumulation and diffusion on GABAergic transmission (Jedlicka et al 2011)
Effects of KIR current inactivation in NAc Medium Spiny Neurons (Steephen and Manchanda 2009)
Effects of synaptic location and timing on synaptic integration (Rall 1964)
Effects of the membrane AHP on the Lateral Superior Olive (LSO) (Zhou & Colburn 2010)
Efficient Method for Computing Synaptic Conductance (Destexhe et al 1994)
Electrically-coupled Retzius neurons (Vazquez et al. 2009)
Emergence of physiological oscillation frequencies in neocortex simulations (Neymotin et al. 2011)
Encoding and retrieval in a model of the hippocampal CA1 microcircuit (Cutsuridis et al. 2009)
Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010)
Ephaptic interactions in olfactory nerve (Bokil et al 2001)
Estimation and Production of Time Intervals (Migliore et al 2001)
Excitability of PFC Basal Dendrites (Acker and Antic 2008)
Excitability of the soma in central nervous system neurons (Safronov et al 2000)
Excitatory and inhibitory interactions in populations of model neurons (Wilson and Cowan 1972)
Extracellular Action Potential Simulations (Gold et al 2007)
Facilitation by residual calcium (Stockbridge, Hines 1982)
Fast AMPA receptor signaling (Geiger et al 1997)
Fast sodium channel gating in mossy fiber axons (Schmidt-Heiber et al. 2010)
Fast-spiking cortical interneuron (Golomb et al. 2007)
Febrile seizure-induced modifications to Ih (Chen et al 2001)
Feedforward heteroassociative network with HH dynamics (Lytton 1998)
Fluctuating synaptic conductances recreate in-vivo-like activity (Destexhe et al 2001)
Fly lobular plate VS cell (Borst and Haag 1996, et al. 1997, et al. 1999)
Four cortical interneuron subtypes (Kubota et al. 2011)
Frog second-order vestibular neuron models (Rössert et al. 2011)
Fronto-parietal visuospatial WM model with HH cells (Edin et al 2007)
Fully Implicit Parallel Simulation of Single Neurons (Hines et al. 2008)
Functional impact of dendritic branch point morphology (Ferrante et al., 2013)
Functional structure of mitral cell dendritic tuft (Djurisic et al. 2008)
GPi/GPe neuron models (Johnson and McIntyre 2008)
Gamma oscillations in hippocampal interneuron networks (Bartos et al 2002)
Gamma oscillations in hippocampal interneuron networks (Wang, Buzsaki 1996)
Generalized Carnevale-Hines algorithm (van Elburg and van Ooyen 2009)
Geometry-induced features of current transfer in neuronal dendrites (Korogod, Kulagina 1998)
Glutamate diffusion and AMPA receptor activation in the cerebellar glomerulus (Saftenku 2005)
HMM of Nav1.7 WT and F1449V (Gurkiewicz et al. 2011)
High frequency oscillations in a hippocampal computational model (Stacey et al. 2009)
High frequency oscillations induced in three gap-junction coupled neurons (Tseng et al. 2008)
Hippocampal basket cell gap junction network dynamics (Saraga et al. 2006)
Hippocampus temporo-septal engram shift model (Lytton 1999)
Hodgkin-Huxley model of persistent activity in PFC neurons (Winograd et al. 2008) (NEURON python)
Hodgkin-Huxley model of persistent activity in prefrontal cortex neurons (Winograd et al. 2008)
Hodgkin-Huxley models of different classes of cortical neurons (Pospischil et al. 2008)
Homeostatic synaptic plasticity (Rabinowitch and Segev 2006a,b)
Hopfield and Brody model (Hopfield, Brody 2000)
Hopfield and Brody model (Hopfield, Brody 2000) (NEURON+python)
Ih levels roles in bursting and regular-spiking subiculum pyramidal neurons (van Welie et al 2006)
Impact of dendritic atrophy on intrinsic and synaptic excitability (Narayanan & Chattarji, 2010)
Impact of dendritic size and topology on pyramidal cell burst firing (van Elburg and van Ooyen 2010)
Increased computational accuracy in multi-compartmental cable models (Lindsay et al. 2005)
Inferior Olive, subthreshold oscillations (Torben-Nielsen, Segev, Yarom 2012)
Inferring connection proximity in electrically coupled networks (Cali et al. 2007)
Input Fluctuations effects on f-I curves (Arsiero et al. 2007)
Interacting synaptic conductances during, distorting, voltage clamp (Poleg-Polsky and Diamond 2011)
Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
Ion channel modeling with whole cell and a genetic algorithm (Gurkiewicz and Korngreen 2007)
Irregular oscillations produced by cyclic recurrent inhibition (Friesen, Friesen 1994)
Irregular spiking in NMDA-driven prefrontal cortex neurons (Durstewitz and Gabriel 2006)
JitCon: Just in time connectivity for large spiking networks (Lytton et al. 2008)
KV1 channel governs cerebellar output to thalamus (Ovsepian et al. 2013)
Ketamine disrupts theta modulation of gamma in a computer model of hippocampus (Neymotin et al 2011)
Kinetic NMDA receptor model (Kampa et al 2004)
Kinetic synaptic models applicable to building networks (Destexhe et al 1998)
L5b PC model constrained for BAC firing and perisomatic current step firing (Hay et al., 2011)
LGMD Variability and logarithmic compression in dendrites (Jones and Gabbiani, 2012, 2012B)
LTP in cerebellar mossy fiber-granule cell synapses (Saftenku 2002)
Large scale model of the olfactory bulb (Yu et al., 2013)
Lateral dendrodenditic inhibition in the Olfactory Bulb (David et al. 2008)
Layer V PFC pyramidal neuron used to study persistent activity (Sidiropoulou & Poirazi 2012)
Learning spatial transformations through STDP (Davison, Frégnac 2006)
Leech Mechanosensory Neurons: Synaptic Facilitation by Reflected APs (Baccus 1998)
Linear vs non-linear integration in CA1 oblique dendrites (Gómez González et al. 2011)
Local variable time step method (Lytton, Hines 2005)
Low Threshold Calcium Currents in TC cells (Destexhe et al 1998)
MEG of Somatosensory Neocortex (Jones et al. 2007)
MNTB Neuron: Kv3.1 currents (Wang et al 1998)
Mammalian Ventricular Cell (Beeler and Reuter 1977)
Mapping function onto neuronal morphology (Stiefel and Sejnowski 2007)
Mathematical model for windup (Aguiar et al. 2010)
Mechanisms of fast rhythmic bursting in a layer 2/3 cortical neuron (Traub et al 2003)
Mechanisms of magnetic stimulation of central nervous system neurons (Pashut et al. 2011)
Medial vestibular neuron models (Quadroni and Knopfel 1994)
Membrane potential changes in dendritic spines during APs and synaptic input (Palmer & Stuart 2009)
Midbrain dopamine neuron: firing patterns (Canavier 1999)
Model of SK current`s influence on precision in Globus Pallidus Neurons (Deister et al. 2009)
Modeling local field potentials (Bedard et al. 2004)
Modelling reduced excitability in aged CA1 neurons as a Ca-dependent process (Markaki et al. 2005)
Models of Na channels from a paper on the PKC control of I Na,P (Baker 2005)
Modulation of temporal integration window (Migliore, Shepherd 2002)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
MyFirstNEURON (Houweling, Sejnowski 1997)
Myelinated axon conduction velocity (Brill et al 1977)
NAcc medium spiny neuron: effects of cannabinoid withdrawal (Spiga et al. 2010)
NEURON + Python (Hines et al. 2009)
NEURON interfaces to MySQL and the SPUD feature extraction algorithm (Neymotin et al. 2007)
NMDA receptor saturation (Chen et al 2001)
Na+ channel dependence of AP initiation in cortical pyramidal neuron (Kole et al. 2008)
Nav1.6 sodium channel model in globus pallidus neurons (Mercer et al. 2007)
Neocort. pyramidal cells subthreshold somatic voltage controls spike propagation (Munro Kopell 2012)
Neocortical Layer I: I-A and I-K (Zhou, Hablitz 1996)
Neocortical pyramidal neuron: deep; effects of dopamine (Durstewitz et al 2000)
Nerve terminal currents at lizard neuromuscular junction (Lindgren, Moore 1989)
Network recruitment to coherent oscillations in a hippocampal model (Stacey et al. 2011)
Networks of spiking neurons: a review of tools and strategies (Brette et al. 2007)
Neural Query System NQS Data-Mining From Within the NEURON Simulator (Lytton 2006)
Neuronal morphology goes digital ... (Parekh & Ascoli 2013)
Neurophysiological impact of inactivation pathways in A-type K+ channels (Fineberg et al 2012)
Nigral dopaminergic neurons: effects of ethanol on Ih (Migliore et al. 2008)
Nonlinear dendritic processing in barrel cortex spiny stellate neurons (Lavzin et al. 2012)
Novel Na current with slow de-inactivation (Tsutsui, Oka 2002)
O-LM interneuron model (Lawrence et al. 2006)
Olfactory Bulb Network (Davison et al 2003)
Olfactory Mitral Cell (Bhalla, Bower 1993)
Olfactory Mitral Cell (Davison et al 2000)
Olfactory Mitral Cell (Shen et al 1999)
Olfactory Mitral Cell: I-A and I-K currents (Wang et al 1996)
Olfactory Mitral cell: AP initiation modes (Chen et al 2002)
Olfactory Periglomerular Cells: I-h kinetics (Cadetti, Belluzzi 2001)
Olfactory bulb cluster formation (Migliore et al. 2010)
Olfactory bulb granule cell: effects of odor deprivation (Saghatelyan et al 2005)
Olfactory bulb mitral and granule cell column formation (Migliore et al. 2007)
Olfactory bulb mitral and granule cell: dendrodendritic microcircuits (Migliore and Shepherd 2008)
Olfactory bulb mitral cell gap junction NN model: burst firing and synchrony (O`Connor et al. 2012)
Olfactory bulb mitral cell: synchronization by gap junctions (Migliore et al 2005)
Oscillating neurons in the cochlear nucleus (Bahmer Langner 2006a, b, and 2007)
Parallel network simulations with NEURON (Migliore et al 2006)
Parametric computation and persistent gamma in a cortical model (Chambers et al. 2012)
Phase response curve of a globus pallidal neuron (Fujita et al. 2011)
Presynaptic calcium dynamics at neuromuscular junction (Stockbridge, Moore 1984)
Prosthetic electrostimulation for information flow repair in a neocortical simulation (Kerr 2012)
Pyramidal Neuron Deep, Superficial; Aspiny, Stellate (Mainen and Sejnowski 1996)
Pyramidal Neuron Deep: K+ kinetics (Korngreen, Sakmann 2000)
Pyramidal Neuron Deep: attenuation in dendrites (Stuart, Spruston 1998)
Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2006)
Pyramidal neuron conductances state and STDP (Delgado et al. 2010)
Rat subthalamic projection neuron (Gillies and Willshaw 2006)
Reciprocal regulation of rod and cone synapse by NO (Kourennyi et al 2004)
Reconstructing cerebellar granule layer evoked LFP using convolution (ReConv) (Diwakar et al. 2011)
Recording from rod bipolar axon terminals in situ (Oltedal et al 2007)
Regulation of a slow STG rhythm (Nadim et al 1998)
Regulation of firing frequency in a midbrain dopaminergic neuron model (Kuznetsova et al. 2010)
Regulation of the firing pattern in dopamine neurons (Komendantov et al 2004)
Reinforcement learning of targeted movement (Chadderdon et al. 2012)
Rejuvenation model of dopamine neuron (Chan et al. 2007)
Resonance properties through Chirp stimulus responses (Narayanan Johnston 2007, 2008)
Response properties of neocort. neurons to temporally modulated noisy inputs (Koendgen et al. 2008)
Retinal Ganglion Cell: I-A (Benison et al 2001)
Retinal Ganglion Cell: I-CaN and I-CaL (Benison et al. 2001)
Retinal Ganglion Cell: I-K (Skaliora et al 1995)
Retinal Ganglion Cell: I-Na,t (Benison et al 2001)
Retinal Photoreceptor: I Potassium (Beech, Barnes 1989)
Rhesus Monkey Layer 3 Pyramidal Neurons: V1 vs PFC (Amatrudo, Weaver et al. 2012)
Ribbon Synapse (Sikora et al 2005)
Rod photoreceptor (Barnes and Hille 1989, Publio et al. 2006, Kourennyi and Liu et al. 2004)
Role of Ih in firing patterns of cold thermoreceptors (Orio et al., 2012)
STD-dependent and independent encoding of Input irregularity as spike rate (Luthman et al. 2011)
STDP depends on dendritic synapse location (Letzkus et al. 2006)
Salamander retinal ganglian cells: morphology influences firing (Sheasby, Fohlmeister 1999)
Salamander retinal ganglion cell: ion channels (Fohlmeister, Miller 1997)
Selective control of cortical axonal spikes by a slowly inactivating K+ current (Shu et al. 2007)
Shaping of action potentials by different types of BK channels (Jaffe et al., 2011)
Short term plasticity at the cerebellar granule cell (Nieus et al. 2006)
Short term plasticity of synapses onto V1 layer 2/3 pyramidal neuron (Varela et al 1997)
Signal integration in LGN cells (Briska et al 2003)
Signal integration in a CA1 pyramidal cell (Graham 2001)
Simple and accurate Diffusion Approximation algorithm for stochastic ion channels
Simulated light response in rod photoreceptors (Liu and Kourennyi 2004)
Simulations of motor unit discharge patterns (Powers et al. 2011)
Site of impulse initiation in a neuron (Moore et al 1983)
Small world networks of Type I and Type II Excitable Neurons (Bogaard et al. 2009)
Sodium channel mutations causing generalized epilepsy with febrile seizures + (Barela et al. 2006)
Sodium currents activate without a delay (Baranauskas and Martina 2006)
Sodium potassium ATPase pump (Chapman et al. 1983)
Space clamp problems in neurons with voltage-gated conductances (Bar-Yehuda and Korngreen 2008)
Spatial gridding and temporal accuracy in NEURON (Hines and Carnevale 2001)
Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995)
Spike exchange methods for a Blue Gene/P supercomputer (Hines et al., 2011)
Spike frequency adaptation in spinal sensory neurones (Melnick et al 2004)
Spike propagation in dendrites with stochastic ion channels (Diba et al. 2006))
Spike repolarization in axon collaterals (Foust et al. 2011)
Spinal Motor Neuron (Dodge, Cooley 1973)
Spinal Motor Neuron (McIntyre et al 2002)
Spinal Motor Neuron: Na, K_A, and K_DR currents (Safronov, Vogel 1995)
Spine fusion and branching effects synaptic response (Rusakov et al 1996, 1997)
Spine neck plasticity controls postsynaptic calcium signals (Grunditz et al. 2008)
Spiny neuron model with dopamine-induced bistability (Gruber et al 2003)
Spontaneous firing caused by stochastic channel gating (Chow, White 1996)
Squid axon (Hodgkin, Huxley 1952) (NEURON)
State and location dependence of action potential metabolic cost (Hallermann et al., 2012)
State dependent drug binding to sodium channels in the dentate gyrus (Thomas & Petrou 2013)
Steady-state Vm distribution of neurons subject to synaptic noise (Rudolph, Destexhe 2005)
Stochastic 3D model of neonatal rat spinal motoneuron (Ostroumov 2007)
Stochastic Ih and Na-channels in pyramidal neuron dendrites (Kole et al 2006)
Storing serial order in intrinsic excitability: a working memory model (Conde-Sousa & Aguiar 2013)
Submyelin Potassium accumulation in Subthalamic neuron (STN) axons (Bellinger et al. 2008)
Subthreshold inact. of K channels modulates APs in bitufted interneurons (Korngreen et al 2005)
Superior paraolivary nucleus neuron (Kopp-Scheinpflug et al. 2011)
Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
Synaptic integration in a model of granule cells (Gabbiani et al 1994)
Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009)
Synaptic plasticity: pyramid->pyr and pyr->interneuron (Tsodyks et al 1998)
Synaptic scaling balances learning in a spiking model of neocortex (Rowan & Neymotin 2013)
Synaptic transmission at the calyx of Held (Graham et al 2001)
Synchrony by synapse location (McTavish et al. 2012)
Synthesis of spatial tuning functions from theta cell spike trains (Welday et al., 2011)
T channel currents (Vitko et al 2005)
T-type Ca current in thalamic neurons (Wang et al 1991)
T-type Calcium currents (McRory et al 2001)
TTX-R Na+ current effect on cell response (Herzog et al 2001)
Temperature-Sensitive conduction at axon branch points (Westerfield et al 1978)
Thalamic Relay Neuron: I-T current (Williams, Stuart 2000)
Thalamic Relay Neuron: I-h (McCormick, Pape 1990)
Thalamic Reticular Network (Destexhe et al 1994)
Thalamic interneuron multicompartment model (Zhu et al. 1999)
Thalamic quiescence of spike and wave seizures (Lytton et al 1997)
Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996)
Thalamocortical and Thalamic Reticular Network (Destexhe et al 1996)
Thalamocortical augmenting response (Bazhenov et al 1998)
The virtual slice setup (Lytton et al. 2008)
Tight junction model of CNS myelinated axons (Devaux and Gow 2008)
Tonic firing in substantia gelatinosa neurons (Melnick et al 2004)
Tonic neuron in spinal lamina I: prolongation of subthreshold depol. (Prescott and De Koninck 2005)
Tonic-clonic transitions in a seizure simulation (Lytton and Omurtag 2007)
Transfer properties of Neuronal Dendrites (Korogod et al 1998)
Translating network models to parallel hardware in NEURON (Hines and Carnevale 2008)
Updated Tritonia Swim CPG (Calin-Jagemann et al. 2007)
Visual Cortex Neurons: Dendritic computations (Archie, Mel 2000)
Visual Cortex Neurons: Dendritic study (Anderson et al 1999)
Vomeronasal sensory neuron (Shimazaki et al 2006)
Xenopus Myelinated Neuron (Frankenhaeuser, Huxley 1964)


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