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Multiple mechanisms of short term plasticity at the calyx of Held (Hennig et al. 2008)
Accession: 113649
This is a new model of the short-term dynamics of glutamatergic synaptic transmission, which incorporates multiple mechanisms acting at differing sites and across a range of different time scales (ms to tens of seconds). In the paper, we show that this model can accurately reproduce the experimentally measured time-course of short term depression across different stimulus frequencies at the calyx of Held. The model demonstrates how multiple forms of activity-dependent modulation of release probability and vesicle pool depletion interact, and shows how stimulus-history-dependent recovery from synaptic depression can arise from dynamics on multiple time scales.
Reference: Hennig MH, Postlethwaite M, Forsythe ID, Graham BP (2008) Interactions between multiple sources of short term plasticity during evoked and spontaneous activity at the rat calyx of Held J Physiol 586(13):3129-3146 [PubMed]
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Model Information (Click on a link to find other models with that property)
Model Type:  Synapse;
Brain Region(s)/Organism:  
Cell Type(s):   Medial Nucleus of the Trapezoid Body (MNTB) neuron;
Channel(s):  I Calcium;  
Gap Junctions:  
Receptor(s):  AMPA; mGluR;
Gene(s):  
Transmitter(s):  Glutamate;
Simulation Environment:  MATLAB;
Model Concept(s):  Short-term Synaptic Plasticity;
Implementer(s):  Hennig, Matthias H [mhhennig at gmail.com];
Search NeuronDB for information about:  AMPA; mGluR; I Calcium; Glutamate;
Model files   Download zip file             Help downloading and running models
\
CalyxSTPModel
index.html
screenshot.jpg
mean_epscs.mat
releasef.m
fig2.m
synOde.m
                            
Calyx of Held - a model of short term plasticity

Matlab scripts for simulation of synaptic depression at the Calyx of Held

These scripts were used for the simulations in the paper: Hennig MH, Postlethwaite M, Forsythe ID and Graham BP (2008). Interactions between multiple sources of short term plasticity during evoked and spontaneous activity at the rat calyx of Held, J Physiol.

The following files are included in this archive:

fig2.m: Main simulation script, reproduces figure 2 in the paper (type "run fig2" after cd'ing to CalyxSTPModel folder):

screenshot

mean_epscs.mat: Experimental data.

releasef.m: Function to simulate the EPSC amplitude during stimulation with a predefined spike train.

synOde.m: The ODEs of the model, called by releasef.m.


Mattias Hennig
Last modified: Sat May 3 22:01:48 BST 2008

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