<?xml version="1.0"?>
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    <name>Data Store:SenseLab</name>
    <location>senselab.med.yale.edu</location>
    <date>5/18/2013 1:30:11 AM</date>
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    <query_parameter>ds=2</query_parameter>
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      <datatype id="V" name="Object/Value" xml_datatype="xs:long" />
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    <metadata_ontology>
      <sem_type_atts>
        <sta id="s97" umls_tui="T097" name="Professional or Occupational Group" />
        <sta id="s28" umls_tui="T028" name="Gene or Genome" />
        <sta id="s72" umls_tui="T072" name="Physical Object" />
        <sta id="s169" umls_tui="T169" name="Functional Concept" />
        <sta id="s192" umls_tui="T192" name="Receptor" />
        <sta id="s25" umls_tui="T025" name="Cell" />
        <sta id="s77" umls_tui="T077" name="Conceptual Entity" />
        <sta id="s103" umls_tui="T103" name="Chemical" />
        <sta id="s45" umls_tui="T045" name="Genetic Function" />
        <sta id="s39" umls_tui="T039" name="Physiologic Function" />
        <sta id="s71" umls_tui="T071" name="Entity" />
        <sta id="s17" umls_tui="T017" name="Anatomical Structure" />
        <sta id="s26" umls_tui="T026" name="Cell Component" />
        <sta id="s185" umls_tui="T185" name="Classification" />
        <sta id="s8" umls_tui="T008" name="Animal" />
        <sta id="s170" umls_tui="T170" name="Intellectual Product" />
        <sta id="s120" umls_tui="T120" name="Chemical Viewed Functionally" />
        <sta id="s123" umls_tui="T123" name="Biologically Active Substance" />
        <sta id="s1" umls_tui="T001" name="Organism" />
      </sem_type_atts>
      <sem_rel_types>
        <srt id="s3" umls_tui="RO" name="Attribute has relationship other than synonomous" />
        <srt id="s4" umls_tui="RB" name="Attribute is broader than Class" />
        <srt id="s5" umls_tui="RN" name="Attribute is narrower than Class" />
        <srt id="s6" umls_tui="AQ" name="Attribute qualifies Class" />
        <srt id="s1" umls_tui="QB" name="Class qualifies Attribute" />
        <srt id="s9" umls_tui="RL" name="Similar or alike concepts" />
      </sem_rel_types>
      <sem_rel_att>
        <sra id="s1" umls_tui="T186" name="is a" />
        <sra id="s22" umls_tui="" name="models" />
        <sra id="s35" umls_tui="" name="classifies" />
        <sra id="s34" umls_tui="" name="simulates" />
        <sra id="s13" umls_tui="" name="research is described in" />
        <sra id="s18" umls_tui="" name="is found in" />
        <sra id="s30" umls_tui="" name="neuronal computational models" />
        <sra id="s5" umls_tui="" name="described in Genbank as" />
        <sra id="s28" umls_tui="" name="Info description" />
      </sem_rel_att>
    </metadata_ontology>
    <database id="d1" name="neurondb" caption="NeuronDB" caption_long="Neuron Database" description="NeuronDB provides a dynamically searchable database of three types of neuronal properties: voltage gated conductances, neurotransmitter receptors, and neurotransmitter substances. It contains tools that provide for integration of these properties in a given type of neuron and comparison of properties across different types of neurons." main_class="18" version="7" version_date="3/3/2009 11:41:40 AM">
      <class id="c18" name="neuron" caption="Neuron" description="Neuronal cells" object_description_hide="true" type="E" is_concept="true" host_concepts="true" umls_cui="C0027882" version="5" version_date="4/7/2008 10:47:32 AM">
        <att id="a22" dt_id="Y" sn="1" name="Picture" caption="Picture" description="" is_concept="true" host_concepts="false" umls_cui="C0441469" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a48" dt_id="C" sn="2" name="Can_Form_type" caption="Canonical Form Type" description="      " ref_class="c21" ref_class_name="canonical_forms" mi="false" required="Yes" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="3/31/2008 1:47:01 PM" />
        <att id="a81" dt_id="S" sn="3" name="Picture_from" caption="Picture from" description="" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="2/3/2006 11:01:45 PM" />
        <att id="a111" dt_id="C" sn="4" name="organism" caption="Organism" description="Present in organims" ref_class="c37" ref_class_name="organism_group" mi="false" is_concept="false" host_concepts="true" umls_cui="C0029235" srt_id="s" sra_id="s18" sta_ids="s1" version="2" version_date="4/11/2007 3:56:22 PM" />
        <att id="a142" dt_id="C" sn="5" name="neuron_category" caption="Neuron category" description="Role of a neuron in microcircuitry or network" ref_class="c43" ref_class_name="Neuron_category" mi="false" required="Yes" is_concept="false" host_concepts="true" srt_id="s" sra_id="s" version="2" version_date="4/2/2002 12:00:02 AM" />
        <att id="a408" dt_id="M" sn="8" name="description" caption="Description" description="Extended description" is_concept="false" host_concepts="false" srt_id="s1" sra_id="s1" version="3" version_date="4/7/2008 10:51:18 AM" />
      </class>
      <class id="c43" name="Neuron_category" caption="Neuron category" description="role of a neuron in neuronal network or microcircuitry" object_description_hide="false" type="E" is_concept="true" host_concepts="true" umls_cui="" version="4" version_date="4/26/2013 12:37:55 PM" />
    </database>
    <database id="d2" name="modeldb" caption="ModelDB" caption_long="Model Database" description="ModelDB provides an accessible location for storing and efficiently retrieving compartmental neuron models. ModelDB is tightly coupled with NeuronDB. Models can be coded in any language for any environment, though ModelDB has been initially constructed for use with NEURON and GENESIS. Model code can be viewed before downloading and browsers can be set to auto-launch the models" main_class="19" version="3" version_date="4/12/2002 11:28:19 AM">
      <class id="c19" name="models" caption="Computational model" description="Neuronal and Network Models.  Mathematical code which describes the time evolution of electrical or chemical states of a portion of a cell, a cell, or a group of cells in detailed or simplified equations." object_description_hide="true" type="E" is_concept="true" host_concepts="false" umls_cui="C0026336" version="6" version_date="12/19/2007 12:00:00 AM">
        <att id="a23" dt_id="Y" sn="1" name="Current_File" caption="Model File" description="This zip file collection is presented initially in showmodel.asp.  Alternate versions or modelView versions can be displayed later if available." is_concept="true" host_concepts="false" umls_cui="C0009609" srt_id="s" sra_id="s" version="4" version_date="10/17/2011 10:36:09 AM" />
        <att id="a24" dt_id="M" sn="2" name="notes" caption="Notes" description="This is a short description of the model usually with info about the associated paper(s)." is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="10/27/2002 1:39:11 PM" />
        <att id="a25" dt_id="C" sn="3" name="neurons" caption="Model Neurons" description="Neuron(s) contained in model" ref_class="c18" ref_class_name="neuron" mi="true" is_concept="false" host_concepts="true" umls_cui="C0027882" srt_id="s6" sra_id="s34" sta_ids="s25" version="3" version_date="10/24/2002 10:46:53 AM" />
        <att id="a414" dt_id="C" sn="4" name="more_cells" caption="More Cells" description="These cells are in models in ModelDB and are not yet present in NeuronDB. When one of these cells is created in NeuronDB it is removed from the modeldb cells class and all the references to the old cell need to be switched to the new." ref_class="c97" ref_class_name="cell" mi="true" is_concept="false" host_concepts="true" srt_id="s9" sra_id="s1" sta_ids="s25" version="3" version_date="12/18/2009 11:19:38 AM" />
        <att id="a27" dt_id="C" sn="5" name="currents" caption="Model Currents" description="Ionic Currents(s) contained in model" ref_class="c17" ref_class_name="current" mi="true" is_concept="true" host_concepts="true" umls_cui="C0162585" srt_id="s6" sra_id="s34" version="4" version_date="12/18/2009 11:19:46 AM" />
        <att id="a26" dt_id="C" sn="7" name="receptors" caption="Model Receptors" description="Receptors(s) contained in model" ref_class="c9" ref_class_name="receptor" mi="true" is_concept="true" host_concepts="true" umls_cui="C0597357" srt_id="s6" sra_id="s34" sta_ids="s192" version="6" version_date="12/18/2009 11:19:29 AM" />
        <att id="a112" dt_id="C" sn="8" name="model_type" caption="Model Type" description="Physical range of model" ref_class="c38" ref_class_name="model_type" mi="true" is_concept="false" host_concepts="true" srt_id="s6" sra_id="s35" version="4" version_date="12/18/2009 11:10:19 AM" />
        <att id="a113" dt_id="C" sn="9" name="model_concept" caption="Model Concept" description="Neurobiological modeling concept" ref_class="c39" ref_class_name="model_topic" mi="true" is_concept="false" host_concepts="true" srt_id="s6" sra_id="s35" version="4" version_date="12/18/2009 11:11:07 AM" />
        <att id="a114" dt_id="C" sn="10" name="modeling_application" caption="Simulator software" description="Programming language in which the model runs" ref_class="c36" ref_class_name="modeling_application" mi="true" is_concept="false" host_concepts="true" umls_cui="C0026339" srt_id="s" sra_id="s" version="3" version_date="12/18/2009 11:11:32 AM" />
        <att id="a155" dt_id="C" sn="10" name="model_paper" caption="Model papers" description="Papers referring this model" ref_class="c42" ref_class_name="model_paper" mi="true" is_concept="true" host_concepts="false" umls_cui="C0034036" srt_id="s6" sra_id="s13" version="4" version_date="10/17/2011 10:36:47 AM" />
        <att id="a476" dt_id="C" sn="11" name="gene" caption="Gene" description="Genes represented with functional electrical, chemical, or Markov models." ref_class="c126" ref_class_name="gene" mi="true" is_concept="false" host_concepts="false" srt_id="s4" sra_id="s5" sta_ids="s28,s45,s192" version="2" version_date="12/18/2009 11:15:15 AM" />
        <att id="a249" dt_id="S" sn="11" name="hg" caption="hg folder name (applicable when in ModelDB hg)" description="Mercurial Version System.  This string holds the top-level folder name of the repository, if an hg repository exists for this model. A link is formed by the accession number and this folder name or for alternative models hgreposinfo repo_list.txt" width="100" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="6" version_date="10/25/2011 11:32:43 AM" />
        <att id="a471" dt_id="C" sn="12" name="region" caption="Region Organism" description="Usually brain region that a model contains (or is contained within).  For simpler organisms the region might be initially the name of the animal.  This attr. is used to classify network models in microcircuitdb." ref_class="c144" ref_class_name="Region" mi="true" is_concept="false" host_concepts="false" srt_id="s3" sra_id="s35" sta_ids="s8,s17" version="3" version_date="12/18/2009 11:14:40 AM" />
        <att id="a469" dt_id="C" sn="13" name="gap_junctions" caption="Gap Junctions" description="Gap Junctions" ref_class="c142" ref_class_name="gap_junctions" mi="false" is_concept="false" host_concepts="false" srt_id="s5" sra_id="s18" sta_ids="s71" version="4" version_date="12/18/2009 11:14:13 AM" />
        <att id="a298" dt_id="S" sn="13" name="model_id" caption="Model ID Number" description="This id number makes it possible to recreate ModelDB with the same model id numbers on an oracle system that has object ids assigned differently by seperating the object ids from the model ids." width="20" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="10/17/2011 10:37:21 AM" />
        <att id="a299" dt_id="C" sn="14" name="implemented_by" caption="Implemented by" description="People who wrote the model code.  These are selected from implementers objects." ref_class="c91" ref_class_name="implementers" mi="true" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" sta_ids="s97" version="1" version_date="11/19/2003 3:14:17 PM" />
        <att id="a309" dt_id="S" sn="15" name="public_submitter_email" caption="Public Submitter Email Address" description="Holds the email address entered at the time of public submission of a model." width="50" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="10/17/2011 10:34:14 AM" />
        <att id="a300" dt_id="S" sn="15" name="rw_access_code" caption="Read write access code" description="This code serves as a password allowing read write access to a model accessed from the ShowModel.asp page.  This attribute definition is merely a placeholder for att id 300." width="20" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="10/17/2011 10:37:45 AM" />
        <att id="a301" dt_id="S" sn="16" name="other_neurons" caption="Other Neuron" description="Gives the model enterer an opportunity to enter a neuron name or names that are not on the current list." width="50" is_concept="true" host_concepts="false" srt_id="s6" sra_id="s30" sta_ids="s25,s185" version="9" version_date="10/17/2011 10:38:22 AM" />
        <att id="a28" dt_id="C" sn="16" name="neurotransmitters" caption="Model Neurotransmitters" description="Neurotransmitter(s) contained in model" ref_class="c7" ref_class_name="neurotransmitter" mi="true" is_concept="true" host_concepts="true" umls_cui="C0027908" srt_id="s6" sra_id="s34" sta_ids="s103,s123" version="3" version_date="12/18/2009 11:08:11 AM" />
        <att id="a302" dt_id="S" sn="17" name="other_receptors" caption="Other Receptor" description="Gives the model enterer an opportunity to enter a Receptor name or names that are not on the current list." width="25" is_concept="true" host_concepts="false" srt_id="s6" sra_id="s30" sta_ids="s192" version="7" version_date="10/17/2011 10:38:42 AM" />
        <att id="a303" dt_id="S" sn="18" name="other_currents" caption="Other Current" description="Gives the model enterer an opportunity to enter an ion channel current name or names that are not on the current list." width="50" is_concept="true" host_concepts="false" srt_id="s6" sra_id="s22" sta_ids="s26,s39,s72" version="6" version_date="10/17/2011 10:38:59 AM" />
        <att id="a304" dt_id="S" sn="19" name="other_neurotransmitter" caption="Other Neurotransmitter" description="Gives the model enterer an opportunity to enter a neurotransmitter name or names that are not on the current list." width="25" is_concept="true" host_concepts="false" srt_id="s6" sra_id="s30" sta_ids="s26,s39,s103,s120" version="5" version_date="10/17/2011 10:39:10 AM" />
        <att id="a305" dt_id="S" sn="20" name="other_type" caption="Other Model Type" description="Gives the model enterer an opportunity to enter a model type (the physical extent of a model) name or names that are not on the current list." width="25" is_concept="true" host_concepts="false" srt_id="s6" sra_id="s28" sta_ids="s17,s185" version="5" version_date="10/17/2011 10:39:20 AM" />
        <att id="a306" dt_id="S" sn="21" name="other_concept" caption="Other Concept" description="Gives the model enterer an opportunity to enter a concept (big picture ideas the model addresses) name or names that are not on the current list." width="25" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" sta_ids="s77,s169" version="6" version_date="10/17/2011 10:39:32 AM" />
        <att id="a307" dt_id="S" sn="22" name="other_simulator" caption="Other Simulator" description="Gives the model enterer an opportunity to enter a simulator name or names that are not on the current list." width="25" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="10/17/2011 10:39:43 AM" />
        <att id="a308" dt_id="M" sn="23" name="other_implementer" caption="Other Implementer" description="Gives the model enterer an opportunity to enter a implementer name or names that are not on the current list." is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="5" version_date="10/17/2011 10:40:00 AM" />
        <att id="a314" dt_id="C" sn="25" name="alternative_version" caption="Alternative Version" description="This attribute attaches alternate_version objects to model objects." ref_class="c92" ref_class_name="alternate_version" mi="true" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="10/17/2011 10:40:25 AM" />
        <att id="a391" dt_id="M" sn="26" name="citation" caption="Citation" description="Either PubMed ID's or citations in any bibliographic style.  It is OK to submit an entry that reflects a preliminary online before print version." is_concept="true" host_concepts="false" srt_id="s" sra_id="s" sta_ids="s170" version="2" version_date="10/17/2011 10:40:52 AM" />
        <att id="a392" dt_id="M" sn="27" name="default_file_notes" caption="Default File Notes" description="When more than one version of the model code is available this attribute describes the default model code file in the pop-up selector in which the alternative model's are also selectable." is_concept="true" host_concepts="false" srt_id="s" sra_id="s" sta_ids="s77" version="2" version_date="10/17/2011 10:41:35 AM" />
        <att id="a477" dt_id="S" sn="33" name="other_gene" caption="Other Gene" description="Gives the model enterer an opportunity to enter a gene name or names that are not on the current list." width="20" is_concept="true" host_concepts="false" srt_id="s6" sra_id="s30" sta_ids="s28" version="2" version_date="10/17/2011 10:41:51 AM" />
        <att id="a488" dt_id="I" sn="34" name="simPFid" caption="Simulation Platform ID" description="Simulation platform id is a unique identifier that maps to/from a modeldb accession number.  It can be used at sim.neuroinf.jp to run simulations remotely." width="0" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="8/2/2011 4:15:17 PM" />
        <att id="a502" dt_id="B" sn="35" name="has_modelview" caption="Has Model View" description="If a model has Model View data available then this attribute being true will cause a button to display that will be a link to a web page of that data" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/5/2013 3:29:56 PM" />
      </class>
      <class id="c36" name="modeling_application" caption="Modeling Application" description="Modeling software in which the model was made" object_description_hide="false" type="E" is_concept="true" host_concepts="true" umls_cui="" version="4" version_date="6/20/2006 10:12:13 AM">
        <att id="a86" dt_id="Y" sn="1" name="logo" caption="logo" description="     Logo" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a87" dt_id="S" sn="1" name="homepage" caption="Homepage" description="Homepage of the modeling software" width="100" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/2/2002 12:00:02 AM" />
        <att id="a105" dt_id="S" sn="1" name="classification" caption="type" description="Application types can be simulator, compiler, protocol, etc.  New types can be added if they do not fit previously used types." width="20" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="12/1/2003 10:52:03 AM" />
        <att id="a103" dt_id="M" sn="1" name="description" caption="Description" description="   Describes the applications uses." is_concept="true" host_concepts="false" umls_cui="C0678257" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a102" dt_id="D" sn="1" name="start_year" caption="Start Year" description=" " is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
      </class>
      <class id="c38" name="model_type" caption="Model Type" description="Physical extent of the model" object_description_hide="false" type="E" is_concept="false" host_concepts="true" umls_cui="" version="3" version_date="6/20/2006 10:13:51 AM" />
      <class id="c39" name="model_topic" caption="Model Topic" description="Big-picture realm, or subject that the model addresses." object_description_hide="false" type="E" is_concept="true" host_concepts="true" umls_cui="" version="2" version_date="9/14/2004 3:33:49 PM">
        <att id="a138" dt_id="M" sn="1" name="description" caption="Description" description="Elaborates on the model concept" is_concept="false" host_concepts="false" umls_cui="C0678257" srt_id="s" sra_id="s" version="3" version_date="4/2/2002 12:00:02 AM" />
        <att id="a141" dt_id="H" sn="2" name="hierarchy" caption="Hierarchy" description="Relationships between concepts, i.e. one concept may be a generalisation of another. The Hierarchy(p) datatype lets you select another model_concept (parent) that this model_concept is a child of." is_concept="false" host_concepts="true" umls_cui="C0699032" srt_id="s4" sra_id="s1" version="3" version_date="4/20/2007 12:59:19 PM" />
      </class>
      <class id="c42" name="model_paper" caption="Paper" description="Stores paper and book citations." object_description_hide="false" type="E" is_concept="true" host_concepts="false" umls_cui="" version="4" version_date="12/13/2005 11:42:19 AM">
        <att id="a139" dt_id="M" sn="1" name="title" caption="Title" description="" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="4" version_date="4/2/2002 12:00:02 AM" />
        <att id="a140" dt_id="H" sn="2" name="references" caption="References" description="Publications referenced" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="4" version_date="2/24/2006 1:56:36 PM" />
        <att id="a148" dt_id="C" sn="3" name="authors" caption="Authors" description="" ref_class="c44" ref_class_name="paper_author" mi="true" is_concept="true" host_concepts="false" umls_cui="C0221192" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a149" dt_id="S" sn="4" name="volume" caption="Volume" description="" width="10" is_concept="true" host_concepts="false" umls_cui="C0449468" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a150" dt_id="S" sn="5" name="first_page" caption="First page" description="" width="10" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a151" dt_id="S" sn="6" name="last_page" caption="Last page" description="" width="10" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a152" dt_id="S" sn="7" name="publisher" caption="Publisher" description="Publisher, can include city or address" width="60" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="7/19/2002 2:21:51 PM" />
        <att id="a153" dt_id="S" sn="8" name="pubmed_id" caption="Pubmed ID" description="" width="20" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/2/2002 12:00:02 AM" />
        <att id="a154" dt_id="S" sn="9" name="year" caption="Year published" description="" width="10" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="4/2/2002 12:00:02 AM" />
        <att id="a156" dt_id="S" sn="10" name="month" caption="Month published" description="" width="10" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a157" dt_id="S" sn="11" name="day" caption="Day published" description="" width="10" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a158" dt_id="S" sn="12" name="journal" caption="Journal or book name" description="This is the journal name or the book name.  Ideally this field will conform to medline's&#xD;&#xA;format when the item has an entry in medline." width="200" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="7/19/2002 2:20:10 PM" />
        <att id="a212" dt_id="S" sn="13" name="book_editor" caption="Book Editor(s)" description="Editor or if  multiple editors, a list of editors." width="50" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="8" version_date="7/24/2003 9:58:35 AM" />
        <att id="a211" dt_id="M" sn="14" name="missing_references" caption="Missing References" description="Cited references that have not been entered into the DB" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="5" version_date="7/24/2003 9:58:47 AM" />
        <att id="a337" dt_id="S" sn="15" name="type" caption="Type" description="Classifies paper as a modeling paper, M, or not a modeling paper, N." width="1" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="12/12/2005 11:14:07 PM" />
        <att id="a339" dt_id="S" sn="16" name="doi" caption="Digital Object Identifier" description="A unique Digital Object Identifier (DOI) supplied by Journals such as the Journal of Computational Neuroscience (JCNS) which uniquely identify papers." width="70" is_concept="true" host_concepts="false" srt_id="s6" sra_id="s1" version="4" version_date="12/22/2010 3:00:38 PM" />
        <att id="a428" dt_id="S" sn="17" name="url" caption="URL" description="Link to article at journal web site from the year of publication, volume, and first page number or some alternative (interoperating robot) method." width="256" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="8" version_date="6/18/2008 10:57:35 AM" />
        <att id="a452" dt_id="C" sn="18" name="stated_usage" caption="Stated Usage" description="If a paper states that they used material from or submitted materials to ModelDB then this attribute can record that use." ref_class="c135" ref_class_name="paper_usage" mi="true" is_concept="false" host_concepts="false" srt_id="s5" sra_id="s13" version="1" version_date="3/11/2008 11:08:27 AM" />
      </class>
      <class id="c44" name="paper_author" caption="Paper Author" description="Model Paper Author" object_description_hide="false" type="E" is_concept="true" host_concepts="false" umls_cui="" version="1" version_date="3/12/2002 12:40:54 PM">
        <att id="a143" dt_id="S" sn="1" name="last_name" caption="Last Name" description="" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a144" dt_id="S" sn="2" name="fore_name" caption="Fore Name" description="Conforms to pubmed's ForeName as appears in pubmed's XML." width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/2/2002 12:00:02 AM" />
        <att id="a145" dt_id="S" sn="3" name="initials" caption="Initials" description="The initials of an author with no spaces.  The sequence of first letters of their names from their first name through their last name excluding their last name (in the format provided from pubmed)" width="8" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/2/2002 12:00:02 AM" />
        <att id="a146" dt_id="S" sn="4" name="alt_first_name" caption="Alternate First Name" description="" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a147" dt_id="S" sn="5" name="midde_name" caption="Middle Name" description="" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
      </class>
      <class id="c73" name="sql_programs" caption="SQL programs" description="These SQL programs are intended to display tables that are useful for administration and development of scripts." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="3" version_date="4/27/2003 9:43:11 AM">
        <att id="a229" dt_id="M" sn="1" name="sql_program" caption="SQL Program" description="This stores an SQL program" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/27/2003 9:45:32 AM" />
        <att id="a230" dt_id="I" sn="2" name="max_rows" caption="Maximum Rows" description="This variable determines the maximum number of rows that are desired to be displayed. If set to &quot;-1&quot; then all rows are displayed." width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/27/2003 9:52:03 AM" />
        <att id="a231" dt_id="I" sn="3" name="max_cols" caption="Maximum Columns" description="This variable determines the maximum number of columns that are desired to be displayed. If set to &quot;-1&quot; then all columns are displayed." width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/27/2003 10:36:43 AM" />
      </class>
      <class id="c87" name="collaboration" caption="Collaboration" description="Current or potential collaborations between local and remote researchers for the purpose of entering models into ModelDB" object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="C0282116" version="1" version_date="9/10/2003 1:38:58 PM">
        <att id="a272" dt_id="S" sn="1" name="paper" caption="Paper or Book" description="Paper whose associated model will be shared, discuissed, or created." width="45" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="6" version_date="9/11/2003 3:11:10 PM" />
        <att id="a267" dt_id="M" sn="2" name="history" caption="History" description="A description of correspondance and activities regarding new models for ModelDB including email addresses and dates." is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="4" version_date="9/10/2003 1:47:40 PM" />
        <att id="a271" dt_id="C" sn="3" name="contact" caption="Local Contact" description="This is the ModelDB administrater-modeler who is collaborating on a model for ModelDB." ref_class="c88" ref_class_name="localcontact" mi="true" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="9/10/2003 2:01:22 PM" />
        <att id="a273" dt_id="C" sn="4" name="status" caption="Status" description="Current status of collaboration" ref_class="c89" ref_class_name="status" mi="false" is_concept="false" host_concepts="false" umls_cui="C0449438" srt_id="s" sra_id="s" version="1" version_date="9/10/2003 3:11:55 PM" />
      </class>
      <class id="c88" name="localcontact" caption="Local Contact" description="A Senselab ModelDB group member that is participating in collaborations to enter models in ModelDB." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="1" version_date="9/10/2003 1:53:10 PM" />
      <class id="c89" name="status" caption="Status" description="Status of a collaboration of a ModelDB administrator-modeler." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="C0449438" version="1" version_date="9/10/2003 3:02:59 PM" />
      <class id="c91" name="implementers" caption="Implementer" description="An implementers is someone who wrote model code. The email address for the individual or group should be provided at the end of the object name in angle brackets." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="3" version_date="11/20/2003 5:28:13 PM" />
      <class id="c92" name="alternate_version" caption="Alternate Model File" description="This object provides the opportunity to store and present alternative versions of a model.  For example these may be the authors original code or a version of the model that runs on a different simulator than the current version." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="1" version_date="6/3/2004 11:14:18 AM">
        <att id="a310" dt_id="I" sn="1" name="version_list_number" caption="Version List Number" description="This value controls the order in which this version is presented relative to the other versions." width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="6/3/2004 11:16:00 AM" />
        <att id="a311" dt_id="Y" sn="2" name="version_file" caption="File Version" description="This stores the zip archived files associated with this version object." is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="6/3/2004 11:17:14 AM" />
        <att id="a312" dt_id="M" sn="3" name="version_notes" caption="Version Notes" description="These notes identifies the use or origin of this version." is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="6/15/2004 11:02:27 AM" />
        <att id="a313" dt_id="B" sn="4" name="version_xml_flag" caption="Version is in XML" description="If true (checked) then the zip file contains an() XML file(s) that is displayed with an XML browser when requested to be viewed." is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="6/3/2004 11:20:36 AM" />
      </class>
      <class id="c97" name="cell" caption="Cell" description="These are the names of neurons and other electrically excitable cells that are represented in models in ModelDB but are not (yet) in NeuronDB" object_description_hide="false" type="E" is_concept="true" host_concepts="true" umls_cui="" version="3" version_date="6/20/2006 10:11:08 AM">
        <att id="a415" dt_id="M" sn="1" name="description" caption="Description" description="Elaborates on the definition of the cell" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/11/2007 5:36:38 PM" />
        <att id="a416" dt_id="H" sn="2" name="hierarchy" caption="Hierarchy(p)" description="Relationships between concepts, i.e. one concept may be a generalisation of another. The Hierarchy(p) datatype lets you select another current (parent) that this model current is a child of." is_concept="false" host_concepts="true" srt_id="s" sra_id="s" version="1" version_date="4/11/2007 5:38:16 PM" />
        <att id="a503" dt_id="C" sn="3" name="specie" caption="Specie" description="" ref_class="c137" ref_class_name="specie" mi="true" is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/26/2013 12:36:28 PM" />
        <att id="a504" dt_id="C" sn="4" name="neuron_category" caption="Neuron Category" description="Neuron category. If none, this cell is not a neuron" ref_class="c43" ref_class_name="Neuron_category" mi="false" is_concept="true" host_concepts="true" srt_id="s" sra_id="s" version="1" version_date="4/26/2013 12:39:26 PM" />
      </class>
      <class id="c117" name="character" caption="Character" description="Name provides one or more adjacent international characters via comma seperated decimal values, while description supplies their ascii replacement if any also as comma seperated decimal values." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="3" version_date="2/26/2007 4:29:02 PM" />
      <class id="c118" name="journal" caption="Journal" description="This class is used to store journal names and abbreviations.  The names are linked together by the Journals tree whose children are the main names and whose grandchildren are the synonyms.  Scripts assign the doi's with methods of querying the journal." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="3" version_date="5/22/2007 1:55:50 PM" />
      <class id="c119" name="tree" caption="Tree or graph" description="Defines cross class hierarchies.  A particular tree is indicated by a collection of object_relationship objects with the particular tree selected as their tree attribute.  The object_relationship objects assigns the relationships between them." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="4" version_date="4/15/2007 8:15:10 PM" />
      <class id="c122" name="term" caption="Ontology term" description="The object_name is a word or phrase being defined by the definition attribute (and likely categorized by relationship class)" object_description_hide="false" type="E" is_concept="true" host_concepts="true" umls_cui="" version="1" version_date="4/14/2007 2:06:12 PM">
        <att id="a418" dt_id="M" sn="1" name="definition" caption="Definition" description="An english language definition for a term.  If there are multiple definitions for the same term create as many objects (with the same name but different def.s as needed.)" is_concept="true" host_concepts="false" srt_id="s5" sra_id="s1" sta_ids="s77" version="2" version_date="4/17/2007 10:43:58 AM" />
      </class>
      <class id="c124" name="relationship_type" caption="Relationship" description="Relationships are also known as relations.  The most frequent examples are &quot;is a&quot; (equivalence), &quot;has more elements but includes&quot;, &quot;is a part of&quot;.  The relationship is given verbatim in the object_name." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="1" version_date="4/14/2007 2:18:55 PM" />
      <class id="c125" name="edge" caption="2 Objects Relationship (edge)" description="Identifies nodes membership in a tree with the edge: &quot;source relationship target&quot; between two objects. The target objects serial no is a presentation sibling listing order.Assign source to 0 to indicate target is root. Obj name/descr unused." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="10" version_date="4/17/2007 11:50:05 AM">
        <att id="a421" dt_id="S" sn="1" name="source" caption="Object One (source or subject)" description="This suppies the first object in a relationship. The EAV_STRING attribute is used to typically store an object_id so that objects external to senselab can be referenced through a doi or URI" width="40" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="4" version_date="4/17/2007 5:39:13 PM" />
        <att id="a422" dt_id="S" sn="2" name="target" caption="Object Two (target)" description="This suppies the second object in a relationship. The EAV_STRING attribute is used to typically store an object_id.  Objects external to senselab can be referenced by a doi or URI stored here also." width="40" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="4" version_date="4/17/2007 5:42:10 PM" />
        <att id="a423" dt_id="C" sn="3" name="relationship" caption="Relationship" description="A reference to a relationship_type object which supplies the relationship in it's object_name (&quot;is a&quot;, &quot;is part of&quot;." ref_class="c124" ref_class_name="relationship_type" mi="true" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/14/2007 2:31:42 PM" />
        <att id="a424" dt_id="C" sn="4" name="tree_object" caption="Membership in a tree" description="Select a tree or a graph (with loops) as the containing class for this edge (a line with two nodes)" ref_class="c119" ref_class_name="tree" mi="false" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/15/2007 7:56:02 PM" />
        <att id="a425" dt_id="I" sn="5" name="serialnumber" caption="Target Serial Number" description="In full generality the target can be a member of multiple trees through multiple edge specifications (object relationships), therefore the serial number needs to be specified for the target in each edge." width="8" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/15/2007 8:06:30 PM" />
      </class>
      <class id="c126" name="gene" caption="Gene Name" description="These (ModelDB applicable) gene's make up the sub-units which, when assembled, form membrane channels and receptors." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="2" version_date="5/9/2007 11:19:19 AM">
        <att id="a453" dt_id="S" sn="1" name="GenebankName" caption="Genebank name" description="" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/1/2008 2:51:41 PM" />
        <att id="a458" dt_id="S" sn="2" name="gene_type" caption="Gene type" description="Gene type encodes channel," width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/1/2008 3:01:10 PM" />
        <att id="a460" dt_id="S" sn="3" name="phenotype" caption="Phenotype" description="Functional description of the gene" width="60" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/1/2008 3:03:12 PM" />
      </class>
      <class id="c127" name="datemodelmadepublic" caption="Provenance-Date made public" description="The name is the object id (accession number) of the model and the description is the yyyymmdd format of the date the model was first made public.  Additional notes." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="6" version_date="8/31/2007 3:26:40 PM">
        <att id="a426" dt_id="C" sn="1" name="additionalnotes" caption="Additional notes" description="Additional notes about the model such as whether or not the model was solicited" ref_class="c128" ref_class_name="beforemodelmadepublic" mi="true" is_concept="false" host_concepts="false" srt_id="s4" sra_id="s35" version="1" version_date="5/11/2007 10:41:33 AM" />
        <att id="a427" dt_id="I" sn="2" name="serialnumber" caption="Serial Number" description="This is the number associated with the listbymodelcreatedate.asp page which orders the models not on the basis of their made public date but on their create date. OK if looses accuracy." width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="5/14/2007 11:01:52 AM" />
        <att id="a506" dt_id="M" sn="3" name="Extra_descriptions" caption="Extra descriptions" description="Further information is provided on the history of this model being made public" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="5/16/2013 4:46:20 PM" />
      </class>
      <class id="c128" name="beforemodelmadepublic" caption="Came to ModelDB because was" description="About model entries, such as whether or not the model code was solicited, or found on the web." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="2" version_date="5/11/2007 3:17:24 PM" />
      <class id="c135" name="paper_usage" caption="Paper Usage" description="This class holds objects that can be attached to papers that describes how the paper referenced ModelDB in its text or citations." object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="2" version_date="3/11/2008 11:05:48 AM" />
      <class id="c136" name="gene_specie" caption="Gene specie" description="Gene information related to particular specie" object_description_hide="true" type="A" is_concept="false" host_concepts="false" umls_cui="" version="2" version_date="4/1/2008 2:55:57 PM">
        <att id="a454" dt_id="C" sn="1" name="gene" caption="Gene" description="" ref_class="c126" ref_class_name="gene" mi="false" required="Yes" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/1/2008 2:53:07 PM" />
        <att id="a455" dt_id="C" sn="2" name="specie" caption="Specie" description="" ref_class="c137" ref_class_name="specie" mi="false" required="Yes" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="2" version_date="4/1/2008 2:56:14 PM" />
        <att id="a456" dt_id="S" sn="3" name="specie_gene_name" caption="Gene name" description="Gene name given to this specie" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/1/2008 2:57:09 PM" />
        <att id="a457" dt_id="S" sn="4" name="chromosome" caption="Chromosome" description="Chromosome encoding this gene" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/1/2008 2:57:37 PM" />
        <att id="a459" dt_id="S" sn="5" name="gene_prefix" caption="Gene prefix" description="Gene prefix used for this specie" width="20" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/1/2008 3:01:56 PM" />
      </class>
      <class id="c137" name="specie" caption="Specie" description="Species used for annotating Genes" object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="1" version_date="4/1/2008 2:55:34 PM" />
      <class id="c142" name="gap_junctions" caption="Gap Junctions" description="Gap Junctions" object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="1" version_date="6/5/2008 3:35:17 PM" />
    </database>
    <database id="d6" name="cellpropdb" caption="CellPropDB" caption_long="Cellular Properties Database" description="Cellular Properties Database (CellPropDB) provides a simple repository for data regarding membrane channels, receptor and neurotransmitters that are expressed in specific types of cells. The database is presently focused on neurons but will eventually include other cell types, such as glia, muscle, and gland cells" main_class="9" version="5" version_date="1/25/2006 3:46:49 PM">
      <class id="c7" name="neurotransmitter" caption="Neurotransmitter" description="Neurotransmitter" object_description_hide="false" type="E" is_concept="true" host_concepts="true" umls_cui="C0027908" version="2" version_date="11/20/2001 1:02:53 PM">
        <att id="a67" dt_id="H" sn="1" name="Parent_Neurotrans" caption="Parent Neurotransmitter" description="      " is_concept="false" host_concepts="true" srt_id="s4" sra_id="s1" version="3" version_date="4/20/2007 12:58:31 PM" />
      </class>
      <class id="c9" name="receptor" caption="Receptor" description="Receptor" object_description_hide="false" type="E" is_concept="true" host_concepts="true" umls_cui="C0597357" version="3" version_date="6/14/2002 12:05:55 PM">
        <att id="a12" dt_id="S" sn="1" name="Receptor_ID" caption="Receptor ID" description="" width="0" is_concept="false" host_concepts="false" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a66" dt_id="H" sn="2" name="parent_receptor" caption="Parent Receptor" description="" is_concept="false" host_concepts="true" srt_id="s4" sra_id="s1" version="2" version_date="4/20/2007 12:58:03 PM" />
      </class>
      <class id="c17" name="current" caption="Current" description="Current" object_description_hide="true" type="E" is_concept="true" host_concepts="true" umls_cui="C0162585" version="4" version_date="4/7/2008 10:15:33 AM">
        <att id="a65" dt_id="C" sn="1" name="Ions" caption="Ions" description="" ref_class="c29" ref_class_name="ion" mi="true" is_concept="true" host_concepts="true" umls_cui="C0022023" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a63" dt_id="S" sn="2" name="Description" caption="Description" description=" " width="100" is_concept="false" host_concepts="false" umls_cui="C0678257" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a64" dt_id="S" sn="3" name="Function" caption="Function" description=" " width="100" is_concept="false" host_concepts="false" umls_cui="C0542341" srt_id="s" sra_id="s" version="1" version_date="4/2/2002 12:00:02 AM" />
        <att id="a100" dt_id="H" sn="4" name="genealogy" caption="Genealogy" description=" " is_concept="false" host_concepts="true" umls_cui="C0023745" srt_id="s4" sra_id="s1" version="3" version_date="4/20/2007 12:57:36 PM" />
        <att id="a497" dt_id="B" sn="5" name="cellpropCurrent" caption="CellpropCurrent" description="If true (-1) this current was originally and is still used by NeuronDB (and CellPropDB), if false (0) this current is used in at least ModelDB." is_concept="true" host_concepts="false" srt_id="s" sra_id="s" version="3" version_date="2/2/2012 5:33:02 PM" />
      </class>
    </database>
    <database id="d16" name="microcircuitdb" caption="MicroCircuitDB" caption_long="Micro-Circuit Database" description="MicroCircuitDB provides an accessible location for storing and efficiently retrieving computational models of brain circuits and networks. MicroCircuitDB is tightly coupled with ModelDB. Models can be coded in any language for any environment. Model code can be viewed before downloading and browsers can be set to auto-launch the models." main_class="0" version="2" version_date="5/13/2008 1:26:45 PM">
      <class id="c144" name="Region" caption="Region" description="" object_description_hide="false" type="E" is_concept="false" host_concepts="false" umls_cui="" version="1" version_date="10/6/2008 5:01:17 PM" />
    </database>
  </metadata>
</edsp>