Modeling Application List

Name/ 1 BioPAX (web link to model)  2 Brian  3 Brian (web link to method)  4 C or C++ program  5 C or C++ program (web link to model)  6 CalC Calcium Calculator  7 CalC Calcium Calculator (web link to model)  8 Catacomb (web link to model)  9 CellExcite (web link to model)  10 CellML  11 CellML (web link to model)  12 Chemesis  13 CNrun  14 COMSOL (web link to model)  15 CONTENT  16 CSIM  17 CSIM (web link to model)  18 Cython  19 Dynamics Solver  20 EDLUT  21 Emergent/PDP++  22 ERNST (Event Related Neuronal Simulation Tool) (web link to model)  23 FEMLAB - COMSOL (web link to a model/method)  24 FORTRAN  25 FORTRAN (web link to a model)  26 GENESIS  27 GENESIS (web link to model)  28 GNUstep NeXTStep/OpenStep  29 IChMASCOT  30 IDL  31 IGOR Pro  32 IonChannelLab  33 Java  34 Java (web link to model)  35 KInNeSS  36 KInNeSS (web link to model)  37 L-Neuron  38 LFPy  39 Lua  40 MadSim  41 Mathematica  42 MATLAB  43 MATLAB (web link to model)  44 MCell  45 MOOSE/PyMOOSE (web link to method)  46 MVASpike  47 MySQL (web link to model)  48 NCS  49 Nengo  50 Neosim  51 NEST (formerly BLISS/SYNOD)  52 Network  53 NeuGen  54 neuroConstruct  55 neuroConstruct (web link to model)  56 Neuron  57 Neuron (web link to model)  58 NeuronC  59 NeuronetExperimenter (web link to model)  60 NEURONPM (web link to tool)  61 Neuronvisio (web link to model)  62 NeuroRD  63 NSL  64 Octave  65 parplex  66 Pascal (web link to model)  67 Pascal/Delphi  68 PCSIM  69 PGENESIS  70 PSICS  71 PSpice  72 PyNN  73 Python  74 Python (web link to model)  75 QBasic/QuickBasic/Turbo Basic  76 QuB  77 R  78 R (web link to model)  79 SABER  80 SBML (web link to model)  81 SciLab  82 Scilab (web link to model)  83 Simulink  84 SNNAP  85 Snnet  86 SPLIT  87 Sspice Symbolic SPICE  88 STEPS  89 Surf-Hippo  90 Synthesis  91 Topographica  92 Topographica (web link to model)  93 Virtual Cell (web link to model)  94 XML (web link to model)  95 XNBC  96 XPP  97 XPP (web link to model)  98 Yale HMM