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Citations for Striatal GABAergic microcircuit, spatial scales of dynamics (Humphries et al, 2010)



Humphries MD, Wood R, Gurney K (2010) Reconstructing the three-dimensional GABAergic microcircuit of the striatum. PLoS Comput Biol 6:e1001011 [PubMed]

References and models cited by this paper

References and models that cite this paper

Alexander GE, DeLong MR (1985) Microstimulation of the primate neostriatum. I. Physiological properties of striatal microexcitable zones. J Neurophysiol 53:1401-16 [PubMed]

Alexander ME, Wickens JR (1993) Analysis of striatal dynamics: the existence of two modes of behaviour. J Theor Biol 163:413-38 [PubMed]

Bar-Gad I, Morris G, Bergman H (2003) Information processing, dimensionality reduction and reinforcement learning in the basal ganglia. Prog Neurobiol 71:439-73 [PubMed]

Bennett BD, Bolam JP (1994) Synaptic input and output of parvalbumin-immunoreactive neurons in the neostriatum of the rat. Neuroscience 62:707-19 [PubMed]

Bennett BD, Wilson CJ (2000) Synaptology and physiology of neostriatal neurones Brain dynamics and the striatal complex, Miller R:Wickens J, ed.

Berke JD (2008) Uncoordinated firing rate changes of striatal fast-spiking interneurons during behavioral task performance. J Neurosci 28:10075-80 [PubMed]

Berke JD, Okatan M, Skurski J, Eichenbaum HB (2004) Oscillatory entrainment of striatal neurons in freely moving rats. Neuron 43:883-96 [PubMed]

Bishop GA, Chang HT, Kitai ST (1982) Morphological and physiological properties of neostriatal neurons: an intracellular horseradish peroxidase study in the rat. Neuroscience 7:179-91 [PubMed]

Bolam JP, Bergman H, Graybiel AM, Kimura M, Plenz D, Seung HS, Surmeier DJ, Wickens JR (2006) Microcircuits in the striatum The Interface Between Neurons and Global Brain Function, Grillner S:Graybiel AM, ed. pp.165

Bullmore E, Sporns O (2009) Complex brain networks: graph theoretical analysis of structural and functional systems. Nat Rev Neurosci 10:186-98 [PubMed]

Burke RE, Marks WB, Ulfhake B (1992) A parsimonious description of motoneuron dendritic morphology using computer simulation. J Neurosci 12:2403-16 [PubMed]

Carrillo-Reid L, Tecuapetla F, Tapia D, Hernandez-Cruz A, Galarraga E, Drucker-Colin R, Barga (2008) Encoding network states by striatal cell assemblies. J Neurophysiol 99:1435-50 [PubMed]

Cowan RL, Wilson CJ, Emson PC, Heizmann CW (1990) Parvalbumin-containing GABAergic interneurons in the rat neostriatum. J Comp Neurol 302:197-205 [PubMed]

Djurfeldt M, Ekeberg O, Lansner A (2008) Large-scale modeling- a tool for conquering the complexity of the brain. Front Neuroinformatics 2:1 [PubMed]

Flaherty AW, Graybiel AM (1993) Output architecture of the primate putamen. J Neurosci 13:3222-37 [PubMed]

Fukuda T (2009) Network architecture of gap junction-coupled neuronal linkage in the striatum. J Neurosci 29:1235-43 [PubMed]

Gerfen CR, Wilson CJ (1996) The basal ganglia. Handbook of Chemical Neuroanatomy, Swanson LW:Et Al, ed. pp.371

Gimenez-Amaya JM, Graybiel AM (1991) Modular organization of projection neurons in the matrix compartment of the primate striatum. J Neurosci 11:779-91 [PubMed]

Gittis AH, Nelson AB, Thwin MT, Palop JJ, Kreitzer AC (2010) Distinct roles of GABAergic interneurons in the regulation of striatal output pathways. J Neurosci 30:2223-34 [PubMed]

Hellwig B (2000) A quantitative analysis of the local connectivity between pyramidal neurons in layers 2-3 of the rat visual cortex. Biol Cybern 82:111-21 [PubMed]

Hjorth J, Blackwell KT, Kotaleski JH (2009) Gap junctions between striatal fast-spiking interneurons regulate spiking activity and synchronization as a function of cortical activity. J Neurosci 29:5276-86 [PubMed]

Humphries MD, Gurney K (2008) Network 'small-world-ness': a quantitative method for determining canonical network equivalence. PLoS One 3:e0002051-5 [PubMed]

Humphries MD, Gurney K, Prescott TJ (2006) The brainstem reticular formation is a small-world, not scale-free, network. Proc Biol Sci 273:503-11 [Journal] [PubMed]
   Medial reticular formation of the brainstem: anatomy and dynamics (Humphries et al. 2006, 2007) [Model]

Humphries MD, Lepora N, Wood R, Gurney K (2009) Capturing dopaminergic modulation and bimodal membrane behaviour of striatal medium spiny neurons in accurate, reduced models. Front Comput Neurosci 3:26 [Journal] [PubMed]
   Dopamine-modulated medium spiny neuron, reduced model (Humphries et al. 2009) [Model]

Humphries MD, Wood R, Gurney K (2009) Dopamine-modulated dynamic cell assemblies generated by the GABAergic striatal microcircuit. Neural Netw 22:1174-88 [Journal] [PubMed]
   Striatal GABAergic microcircuit, dopamine-modulated cell assemblies (Humphries et al. 2009) [Model]

Ingham CA, Hood SH, Taggart P, Arbuthnott GW (1998) Plasticity of synapses in the rat neostriatum after unilateral lesion of the nigrostriatal dopaminergic pathway. J Neurosci 18:4732-43 [PubMed]

Izhikevich EM (2007) Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting

Izhikevich EM, Edelman GM (2008) Large-scale model of mammalian thalamocortical systems. Proc Natl Acad Sci U S A 105:3593-8 [PubMed]

Jain M, Armstrong RJ, Barker RA, Rosser AE (2001) Cellular and molecular aspects of striatal development. Brain Res Bull 55:533-40 [PubMed]

Kalisman N, Silberberg G, Markram H (2003) Deriving physical connectivity from neuronal morphology. Biol Cybern 88:210-8 [PubMed]

Kawaguchi Y (1993) Physiological, morphological, and histochemical characterization of three classes of interneurons in rat neostriatum. J Neurosci 13:4908-23 [PubMed]

Kawaguchi Y, Karube F, Kubota Y (2006) Dendritic branch typing and spine expression patterns in cortical nonpyramidal cells. Cereb Cortex 16:696-711 [PubMed]

Kawaguchi Y, Wilson CJ, Augood SJ, Emson PC (1995) Striatal interneurones: chemical, physiological and morphological characterization. Trends Neurosci 18:527-35 [PubMed]

Kincaid AE, Zheng T, Wilson CJ (1998) Connectivity and convergence of single corticostriatal axons. J Neurosci 18:4722-31 [PubMed]

Kita H, Kosaka T, Heizmann CW (1990) Parvalbumin-immunoreactive neurons in the rat neostriatum: a light and electron microscopic study. Brain Res 536:1-15 [PubMed]

Koos T, Tepper JM (1999) Inhibitory control of neostriatal projection neurons by GABAergic interneurons. Nat Neurosci 2:467-72 [PubMed]

Koos T, Tepper JM, Wilson CJ (2004) Comparison of IPSCs evoked by spiny and fast-spiking neurons in the neostriatum. J Neurosci 24:7916-22 [PubMed]

Kotaleski JH, Plenz D, Blackwell KT (2006) Using potassium currents to solve signal-to-noise problems in inhibitory feedforward networks of the striatum. J Neurophysiol 95:331-41 [Journal] [PubMed]
   FS Striatal interneuron: K currents solve signal-to-noise problems (Kotaleski et al 2006) [Model]

Kubota Y, Kawaguchi Y (2000) Dependence of GABAergic synaptic areas on the interneuron type and target size. J Neurosci 20:375-86 [PubMed]

Lau T, Gage GJ, Berke JD, Zochowski M (2010) Local dynamics of gap-junction-coupled interneuron networks. Phys Biol 7:16015-86 [PubMed]

Lee T, Kaneko T, Shigemoto R, Nomura S, Mizuno N (1997) Collateral projections from striatonigral neurons to substance P receptor-expressing intrinsic neurons in the striatum of the rat. J Comp Neurol 388:250-64 [PubMed]

Liley DTJ, Wright JJ (1994) Intracortical connectivity of pyramidal and stellate cells: estimates of synaptic densities and coupling symmetry Network 5:175-189

Luk KC, Sadikot AF (2001) GABA promotes survival but not proliferation of parvalbumin-immunoreactive interneurons in rodent neostriatum: an in vivo study with stereology. Neuroscience 104:93-103 [PubMed]

Mallet N, Le Moine C, Charpier S, Gonon F (2005) Feedforward inhibition of projection neurons by fast-spiking GABA interneurons in the rat striatum in vivo. J Neurosci 25:3857-69 [PubMed]

Markram H (2006) The blue brain project. Nat Rev Neurosci 7:153-60 [Journal] [PubMed]

McGeorge AJ, Faull RL (1989) The organization of the projection from the cerebral cortex to the striatum in the rat. Neuroscience 29:503-37 [PubMed]

Meredith GE, Agolia R, Arts MP, Groenewegen HJ, Zahm DS (1992) Morphological differences between projection neurons of the core and shell in the nucleus accumbens of the rat. Neuroscience 50:149-62 [PubMed]

Meredith GE, Ypma P, Zahm DS (1995) Effects of dopamine depletion on the morphology of medium spiny neurons in the shell and core of the rat nucleus accumbens. J Neurosci 15:3808-20 [PubMed]

Moyer JT, Wolf JA, Finkel LH (2007) Effects of dopaminergic modulation on the integrative properties of the ventral striatal medium spiny neuron. J Neurophysiol 98:3731-48 [PubMed]

O'Donnell P, Grace AA (1997) Cortical afferents modulate striatal gap junction permeability via nitric oxide. Neuroscience 76:1-5 [PubMed]

Oorschot DE (1996) Total number of neurons in the neostriatal, pallidal, subthalamic, and substantia nigral nuclei of the rat basal ganglia: a stereological study using the cavalieri and optical disector methods. J Comp Neurol 366:580-99 [PubMed]

Planert H, Szydlowski SN, Hjorth JJ, Grillner S, Silberberg G (2010) Dynamics of synaptic transmission between fast-spiking interneurons and striatal projection neurons of the direct and indirect pathways. J Neurosci 30:3499-507 [PubMed]

Plenz D (2003) When inhibition goes incognito: feedback interaction between spiny projection neurons in striatal function. Trends Neurosci 26:436-43 [PubMed]

Ponzi A, Wickens J (2010) Sequentially switching cell assemblies in random inhibitory networks of spiking neurons in the striatum. J Neurosci 30:5894-911 [PubMed]

Preston RJ, Bishop GA, Kitai ST (1980) Medium spiny neuron projection from the rat striatum: an intracellular horseradish peroxidase study. Brain Res 183:253-63 [PubMed]

Redgrave P, Prescott TJ, Gurney K (1999) The basal ganglia: a vertebrate solution to the selection problem? Neuroscience 89:1009-23 [PubMed]

Sharma K, Leonard AE, Lettieri K, Pfaff SL (2000) Genetic and epigenetic mechanisms contribute to motor neuron pathfinding. Nature 406:515-9 [PubMed]

Song S, Sjostrom PJ, Reigl M, Nelson S, Chklovskii DB (2005) Highly nonrandom features of synaptic connectivity in local cortical circuits. PLoS Biol 3:e68-88 [PubMed]

Stepanyants A, Chklovskii DB (2005) Neurogeometry and potential synaptic connectivity. Trends Neurosci 28:387-94 [PubMed]

Sullivan MA, Chen H, Morikawa H (2008) Recurrent inhibitory network among striatal cholinergic interneurons. J Neurosci 28:8682-90 [PubMed]

Taverna S, Ilijic E, Surmeier DJ (2008) Recurrent collateral connections of striatal medium spiny neurons are disrupted in models of Parkinson's disease. J Neurosci 28:5504-12 [PubMed]

Taverna S, van Dongen YC, Groenewegen HJ, Pennartz CM (2004) Direct physiological evidence for synaptic connectivity between medium-sized spiny neurons in rat nucleus accumbens in situ. J Neurophysiol 91:1111-21 [PubMed]

Tecuapetla F, Carrillo-Reid L, Bargas J, Galarraga E (2007) Dopaminergic modulation of short-term synaptic plasticity at striatal inhibitory synapses. Proc Natl Acad Sci U S A 104:10258-63 [PubMed]

Tepper JM, Koos T, Wilson CJ (2004) GABAergic microcircuits in the neostriatum. Trends Neurosci 27:662-9 [PubMed]

Traub RD, Kopell N, Bibbig A, Buhl EH, LeBeau FE, Whittington MA (2001) Gap junctions between interneuron dendrites can enhance synchrony of gamma oscillations in distributed networks. J Neurosci 21:9478-86 [PubMed]

Tunstall MJ, Oorschot DE, Kean A, Wickens JR (2002) Inhibitory interactions between spiny projection neurons in the rat striatum. J Neurophysiol 88:1263-9 [Journal] [PubMed]

Venance L, Glowinski J, Giaume C (2004) Electrical and chemical transmission between striatal GABAergic output neurones in rat brain slices. J Physiol 559:215-30 [PubMed]

Verhage M, Maia AS, Plomp JJ, Brussaard AB, Heeroma JH, Vermeer H, Toonen RF, Hammer RE, van (2000) Synaptic assembly of the brain in the absence of neurotransmitter secretion. Science 287:864-9 [PubMed]

Walker RH, Arbuthnott GW, Baughman RW, Graybiel AM (1993) Dendritic domains of medium spiny neurons in the primate striatum: relationships to striosomal borders. J Comp Neurol 337:614-28 [PubMed]

Wickens J (1997) Basal ganglia: Structure and computations Network: Computation in Neural Systems 8:R77-109

Wickens JR, Alexander ME, Miller R (1991) Two dynamic modes of striatal function under dopaminergic-cholinergic control: simulation and analysis of a model. Synapse 8:1-12 [PubMed]

Wilson CJ (1992) Dendritic morphology, inward rectification and the functional properties of neostriatal neurons. Single Neuron Computation., McKenna T:Et Al, ed. pp.141

Wilson CJ (2000) Striatal circuitry: Categorically selective, or selectively categorical? Brain Dynamics and the Striatal Complex, Miller R:Wickens J, ed. pp.289

Wilson CJ, Groves PM (1980) Fine structure and synaptic connections of the common spiny neuron of the rat neostriatum: a study employing intracellular inject of horseradish peroxidase. J Comp Neurol 194:599-615 [PubMed]

Wilson CJ, Groves PM, Kitai ST, Linder JC (1983) Three-dimensional structure of dendritic spines in the rat neostriatum. J Neurosci 3:383-8 [PubMed]

Wolf JA, Moyer JT, Lazarewicz MT, Contreras D, Benoit-Marand M, O'Donnell P, Finkel LH (2005) NMDA-AMPA ratio impacts state transitions and entrainment to oscillations in a computational model of the nucleus accumbens medium spiny projection neuron. J Neurosci 25:9080-95 [Journal] [PubMed]
   Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005) [Model]

Yamamoto N, Tamada A, Murakami F (2002) Wiring of the brain by a range of guidance cues. Prog Neurobiol 68:393-407 [PubMed]

Yin HH, Knowlton BJ (2006) The role of the basal ganglia in habit formation. Nat Rev Neurosci 7:464-76 [PubMed]

Zheng T, Wilson CJ (2002) Corticostriatal combinatorics: the implications of corticostriatal axonal arborizations. J Neurophysiol 87:1007-17 [PubMed]

Zhou FM, Wilson CJ, Dani JA (2002) Cholinergic interneuron characteristics and nicotinic properties in the striatum. J Neurobiol 53:590-605 [PubMed]

(80 refs)


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