SenseLab

Computational model (s) having I Calcium as Model Currents


 
Name
1 A 1000 cell network model for Lateral Amygdala (Kim et al. 2013)
2 A detailed Purkinje cell model (Masoli et al 2015)
3 A dynamic model of the canine ventricular myocyte (Hund, Rudy 2004)
4 A Fast Rhythmic Bursting Cell: in vivo cell modeling (Lee 2007)
5 A kinetic model unifying presynaptic short-term facilitation and depression (Lee et al. 2009)
6 A mathematical model of a neurovascular unit (Dormanns et al 2015, 2016) (Farrs & David 2011)
7 A mathematical model of evoked calcium dynamics in astrocytes (Handy et al 2017)
8 A Model of Multiple Spike Initiation Zones in the Leech C-interneuron (Crisp 2009)
9 A model of slow motor unit (Kim, 2017)
10 A model of the T-junction of a C-fiber sensory neuron (Sundt et al. 2015)
11 A multilayer cortical model to study seizure propagation across microdomains (Basu et al. 2015)
12 A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (CellML)
13 A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (SBML)
14 A network model of tail withdrawal in Aplysia (White et al 1993)
15 A network of AOB mitral cells that produces infra-slow bursting (Zylbertal et al. 2017)
16 A phantom bursting mechanism for episodic bursting (Bertram et al 2008)
17 A set of reduced models of layer 5 pyramidal neurons (Bahl et al. 2012)
18 A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2011)
19 A single column thalamocortical network model (Traub et al 2005)
20 A two-layer biophysical olfactory bulb model of cholinergic neuromodulation (Li and Cleland 2013)
21 Action Potential initiation and backpropagation in Neocortical L5 Pyramidal Neuron (Hu et al. 2009)
22 Action potential of mouse urinary bladder smooth muscle (Mahapatra et al 2018)
23 Action potential reconstitution from measured current waveforms (Alle et al. 2009)
24 Actions of Rotenone on ionic currents and MEPPs in Mouse Hippocampal Neurons (Huang et al 2018)
25 Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018)
26 Activity constraints on stable neuronal or network parameters (Olypher and Calabrese 2007)
27 Activity patterns in a subthalamopallidal network of the basal ganglia model (Terman et al 2002)
28 Alcohol action in a detailed Purkinje neuron model and an efficient simplified model (Forrest 2015)
29 Amyloid-beta effects on release probability and integration at CA3-CA1 synapses (Romani et al. 2013)
30 An allosteric kinetics of NMDARs in STDP (Urakubo et al. 2008)
31 AOB mitral cell: persistent activity without feedback (Zylbertal et al., 2015)
32 Axon-somatic back-propagation in a detailed model of cat spinal motoneuron (Balbi et al, 2015)
33 Axonal NaV1.6 Sodium Channels in AP Initiation of CA1 Pyramidal Neurons (Royeck et al. 2008)
34 Basal ganglia-thalamic network model for deep brain stimulation (So et al. 2011)
35 Biophysical and phenomenological models of spike-timing dependent plasticity (Badoual et al. 2006)
36 Biophysically detailed model of the mouse sino-atrial node cell (Kharche et al. 2011)
37 Boundary effects influence velocity in transverse propagation of cardiac APs (Sperelakis et al 2005)
38 Burst induced synaptic plasticity in Apysia sensorimotor neurons (Phares et al 2003)
39 Bursting activity of neuron R15 in Aplysia (Canavier et al 1991, Butera et al 1995)
40 Bursting and resonance in cerebellar granule cells (D'Angelo et al. 2001)
41 Ca(2+) oscillations based on Ca-induced Ca-release (Dupont et al 1991)
42 Ca+/HCN channel-dependent persistent activity in multiscale model of neocortex (Neymotin et al 2016)
43 CA1 network model for place cell dynamics (Turi et al 2019)
44 CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
45 CA1 pyramidal neuron (Combe et al 2018)
46 CA1 pyramidal neuron to study INaP properties and repetitive firing (Uebachs et al. 2010)
47 CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003)
48 CA1 pyramidal neuron: dendritic Ca2+ inhibition (Muellner et al. 2015)
49 CA1 pyramidal neuron: effects of R213Q and R312W Kv7.2 mutations (Miceli et al. 2013)
50 CA1 pyramidal neuron: functional significance of axonal Kv7 channels (Shah et al. 2008)
51 Ca2+ Oscillations in Sympathetic neurons (Friel 1995)
52 CA3 pyramidal neuron (Lazarewicz et al 2002)
53 CA3 Pyramidal Neuron (Migliore et al 1995)
54 CA3 pyramidal neuron (Safiulina et al. 2010)
55 CA3 pyramidal neuron: firing properties (Hemond et al. 2008)
56 Calcium and potassium currents of olfactory bulb juxtaglomerular cells (Masurkar and Chen 2011)
57 Calcium dynamics depend on dendritic diameters (Anwar et al. 2014)
58 Calcium response prediction in the striatal spines depending on input timing (Nakano et al. 2013)
59 Cardiac action potentials and pacemaker activity of sinoatrial node (DiFrancesco & Noble 1985)
60 Cardiac Atrial Cell (Courtemanche et al 1998)
61 Cardiac Atrial Cell (Courtemanche et al 1998) (C++)
62 Cerebellar Golgi cell (Solinas et al. 2007a, 2007b)
63 Cerebellar purkinje cell (De Schutter and Bower 1994)
64 Cerebellar purkinje cell: interacting Kv3 and Na currents influence firing (Akemann, Knopfel 2006)
65 Cerebellar purkinje cell: K and Ca channels regulate APs (Miyasho et al 2001)
66 Cerebellar Purkinje Cell: resurgent Na current and high frequency firing (Khaliq et al 2003)
67 Cerebellum granule cell FHF (Dover et al. 2016)
68 Cerebellum Purkinje cell: dendritic ion channels activated by climbing fibre (Ait Ouares et al 2019)
69 Channel density variability among CA1 neurons (Migliore et al. 2018)
70 Coincident signals in Olfactory Bulb Granule Cell spines (Aghvami et al 2019)
71 Collection of simulated data from a thalamocortical network model (Glabska, Chintaluri, Wojcik 2017)
72 Comparison of full and reduced globus pallidus models (Hendrickson 2010)
73 Competing oscillator 5-cell circuit and Parameterscape plotting (Gutierrez et al. 2013)
74 Complex CA1-neuron to study AP initiation (Wimmer et al. 2010)
75 Contrast invariance by LGN synaptic depression (Banitt et al. 2007)
76 Control of oscillations and spontaneous firing in dopamine neurons (Rumbell & Kozloski 2019)
77 Controlling KCa channels with different Ca2+ buffering models in Purkinje cell (Anwar et al. 2012)
78 Cortex-Basal Ganglia-Thalamus network model (Kumaravelu et al. 2016)
79 Current Dipole in Laminar Neocortex (Lee et al. 2013)
80 D2 dopamine receptor modulation of interneuronal activity (Maurice et al. 2004)
81 Data-driven, HH-type model of the lateral pyloric (LP) cell in the STG (Nowotny et al. 2008)
82 DBS of a multi-compartment model of subthalamic nucleus projection neurons (Miocinovic et al. 2006)
83 Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
84 Dendritic L-type Ca currents in motoneurons (Carlin et al 2000)
85 Dendritic properties control energy efficiency of APs in cortical pyramidal cells (Yi et al 2017)
86 Dendritic spine geometry, spine apparatus organization: spatiotemporal Ca dynamics (Bell et al 2019)
87 Dentate granule cell: mAHP & sAHP; SK & Kv7/M channels (Mateos-Aparicio et al., 2014)
88 Dentate gyrus granule cell: calcium and calcium-dependent conductances (Aradi and Holmes 1999)
89 Dentate gyrus network model (Santhakumar et al 2005)
90 Dentate gyrus network model (Tejada et al 2014)
91 Determinants of the intracellular and extracellular waveforms in DA neurons (Lopez-Jury et al 2018)
92 Deterministic chaos in a mathematical model of a snail neuron (Komendantov and Kononenko 1996)
93 Differences between type A and B photoreceptors (Blackwell 2006)
94 Differential modulation of pattern and rate in a dopamine neuron model (Canavier and Landry 2006)
95 Discharge hysteresis in motoneurons (Powers & Heckman 2015)
96 Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018)
97 Dopamine neuron of the vent. periaqu. gray and dors. raphe nucleus (vlPAG/DRN) (Dougalis et al 2017)
98 Dopaminergic cell bursting model (Kuznetsov et al 2006)
99 Dopaminergic subtantia nigra neuron (Moubarak et al 2019)
100 DRt neuron model (Sousa et al., 2014)
101 Dynamic cortical interlaminar interactions (Carracedo et al. 2013)
102 Dynamical model of olfactory bulb mitral cell (Rubin, Cleland 2006)
103 Effect of voltage sensitive fluorescent proteins on neuronal excitability (Akemann et al. 2009)
104 Effects of increasing CREB on storage and recall processes in a CA1 network (Bianchi et al. 2014)
105 Electrically-coupled Retzius neurons (Vazquez et al. 2009)
106 Emergent properties of networks of biological signaling pathways (Bhalla, Iyengar 1999)
107 Endocannabinoid dynamics gate spike-timing dependent depression and potentiation (Cui et al 2016)
108 Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010)
109 Enhanced Excitability in Hermissenda: modulation by 5-HT (Cai et al 2003)
110 Epilepsy may be caused by very small functional changes in ion channels (Thomas et al. 2009)
111 ERG current in repolarizing plateau potentials in dopamine neurons (Canavier et al 2007)
112 Excitability of DA neurons and their regulation by synaptic input (Morozova et al. 2016a, 2016b)
113 Excitation-contraction coupling in an integrative heart cell model (Greenstein et al 2006)
114 Firing neocortical layer V pyramidal neuron (Reetz et al. 2014; Stadler et al. 2014)
115 Gamma genesis in the basolateral amygdala (Feng et al 2019)
116 GC model (Beining et al 2017)
117 Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010)
118 GPi/GPe neuron models (Johnson and McIntyre 2008)
119 Half-center oscillator database of leech heart interneuron model (Doloc-Mihu & Calabrese 2011)
120 HH model neuron of the Suprachiasmatic Nucleus including a persistent Na+ channel (Paul et al 2016)
121 High frequency stimulation of the Subthalamic Nucleus (Rubin and Terman 2004)
122 Hippocampal CA1 NN with spontaneous theta, gamma: full scale & network clamp (Bezaire et al 2016)
123 Hippocampal CA3 network and circadian regulation (Stanley et al. 2013)
124 Hypocretin and Locus Coeruleus model neurons (Carter et al 2012)
125 Impact of dendritic atrophy on intrinsic and synaptic excitability (Narayanan & Chattarji, 2010)
126 Impact of dendritic size and topology on pyramidal cell burst firing (van Elburg and van Ooyen 2010)
127 Impedance spectrum in cortical tissue: implications for LFP signal propagation (Miceli et al. 2017)
128 Influence of dendritic structure on neocortical neuron firing patterns (Mainen and Sejnowski 1996)
129 Infraslow intrinsic rhythmogenesis in a subset of AOB projection neurons (Gorin et al 2016)
130 Inhibition and glial-K+ interaction leads to diverse seizure transition modes (Ho & Truccolo 2016)
131 Investigation of different targets in deep brain stimulation for Parkinson`s (Pirini et al. 2009)
132 Ionic basis of alternans and Timothy Syndrome (Fox et al. 2002), (Zhu and Clancy 2007)
133 Ionic current model of a Hypoglossal Motoneuron (Purvis & Butera 2005)
134 Ionic mechanisms of bursting in CA3 pyramidal neurons (Xu and Clancy 2008)
135 Ionic mechanisms of dendritic spikes (Almog and Korngreen 2014)
136 Kv4.3, Kv1.4 encoded K channel in heart cells & tachy. (Winslow et al 1999, Greenstein et al 2000)
137 L5b PC model constrained for BAC firing and perisomatic current step firing (Hay et al., 2011)
138 Layer V pyramidal cell functions and schizophrenia genetics (Mäki-Marttunen et al 2019)
139 Layer V pyramidal cell model with reduced morphology (Mäki-Marttunen et al 2018)
140 Learning intrinsic excitability in Medium Spiny Neurons (Scheler 2014)
141 Leech Heart (HE) Motor Neuron conductances contributions to NN activity (Lamb & Calabrese 2013)
142 Leech heart interneuron network model (Hill et al 2001, 2002)
143 Leech Mechanosensory Neurons: Synaptic Facilitation by Reflected APs (Baccus 1998)
144 LGMD Variability and logarithmic compression in dendrites (Jones and Gabbiani, 2012, 2012B)
145 Linear vs non-linear integration in CA1 oblique dendrites (Gómez González et al. 2011)
146 Lobster STG pyloric network model with calcium sensor (Gunay & Prinz 2010) (Prinz et al. 2004)
147 Locational influence of dendritic PIC on input-output properties of spinal motoneurons (Kim 2017)
148 Low dose of dopamine may stimulate prolactin secretion by increasing K currents (Tabak et al. 2006)
149 Mammalian Ventricular Cell (Beeler and Reuter 1977)
150 Mature and young adult-born dentate granule cell models (T2N interface) (Beining et al. 2017)
151 Mechanisms of fast rhythmic bursting in a layer 2/3 cortical neuron (Traub et al 2003)
152 MEG of Somatosensory Neocortex (Jones et al. 2007)
153 Mirror Neuron (Antunes et al 2017)
154 Mixed mode oscillations as a mechanism for pseudo-plateau bursting (Vo et al. 2010)
155 Model for K-ATP mediated bursting in mSNc DA neurons (Knowlton et al 2018)
156 Model of arrhythmias in a cardiac cells network (Casaleggio et al. 2014)
157 Model of DARPP-32 phosphorylation in striatal medium spiny neurons (Lindskog et al. 2006)
158 Model of eupnea and sigh generation in respiratory network (Toporikova et al 2015)
159 Model of the cerebellar granular network (Sudhakar et al 2017)
160 Model of the Xenopus tadpole swimming spinal network (Roberts et al. 2014)
161 Modeling interactions in Aplysia neuron R15 (Yu et al 2004)
162 Modulation of septo-hippocampal theta activity by GABAA receptors (Hajos et al. 2004)
163 Morris-Lecar model of the barnacle giant muscle fiber (Morris, Lecar 1981)
164 Multi-comp. CA1 O-LM interneuron model with varying dendritic Ih distributions (Sekulic et al 2015)
165 Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
166 Multiple dynamical modes of thalamic relay neurons (Wang XJ 1994)
167 Multiple mechanisms of short term plasticity at the calyx of Held (Hennig et al. 2008)
168 Multiple modes of a conditional neural oscillator (Epstein, Marder 1990)
169 Multiscale simulation of the striatal medium spiny neuron (Mattioni & Le Novere 2013)
170 Multitarget pharmacology for Dystonia in M1 (Neymotin et al 2016)
171 MyFirstNEURON (Houweling, Sejnowski 1997)
172 Na channel mutations in the dentate gyrus (Thomas et al. 2009)
173 Nav1.6 sodium channel model in globus pallidus neurons (Mercer et al. 2007)
174 Network model with neocortical architecture (Anderson et al 2007,2012; Azhar et al 2012)
175 Neural mass model of spindle generation in the isolated thalamus (Schellenberger Costa et al. 2016)
176 Neural mass model of the sleeping thalamocortical system (Schellenberger Costa et al 2016)
177 Neuronal dendrite calcium wave model (Neymotin et al, 2015)
178 Nigral dopaminergic neurons: effects of ethanol on Ih (Migliore et al. 2008)
179 NMDA subunit effects on Calcium and STDP (Evans et al. 2012)
180 Olfactory bulb microcircuits model with dual-layer inhibition (Gilra & Bhalla 2015)
181 Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
182 Olfactory Bulb Network (Davison et al 2003)
183 Olfactory Mitral Cell (Bhalla, Bower 1993)
184 Olfactory Mitral Cell (Davison et al 2000)
185 Optical stimulation of a channelrhodopsin-2 positive pyramidal neuron model (Foutz et al 2012)
186 Paired turbulence and light effect on calcium increase in Hermissenda (Blackwell 2004)
187 Paradoxical GABA-mediated excitation (Lewin et al. 2012)
188 Parametric computation and persistent gamma in a cortical model (Chambers et al. 2012)
189 Parvalbumin-positive basket cells differentiate among hippocampal pyramidal cells (Lee et al. 2014)
190 Phase response curve of a globus pallidal neuron (Fujita et al. 2011)
191 Pleiotropic effects of SCZ-associated genes (Mäki-Marttunen et al. 2017)
192 Prediction for the presence of voltage-gated Ca2+ channels in myelinated central axons (Brown 2003)
193 Preserving axosomatic spiking features despite diverse dendritic morphology (Hay et al., 2013)
194 Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011)
195 PyMUS: A Python based Motor Unit Simulator (Kim & Kim 2018)
196 Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2003)
197 Pyramidal neuron conductances state and STDP (Delgado et al. 2010)
198 Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001)
199 Rapid desynchronization of an electrically coupled Golgi cell network (Vervaeke et al. 2010)
200 Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016)
201 Rat subthalamic projection neuron (Gillies and Willshaw 2006)
202 Reciprocal regulation of rod and cone synapse by NO (Kourennyi et al 2004)
203 Reconstructing cerebellar granule layer evoked LFP using convolution (ReConv) (Diwakar et al. 2011)
204 Regulation of the firing pattern in dopamine neurons (Komendantov et al 2004)
205 Rejuvenation model of dopamine neuron (Chan et al. 2007)
206 Reverberatory bursts propagation and synchronization in developing cultured NNs (Huang et al 2016)
207 Rhesus Monkey Layer 3 Pyramidal Neurons: Young vs aged PFC (Coskren et al. 2015)
208 Rhesus Monkey Young and Aged L3 PFC Pyramidal Neurons (Rumbell et al. 2016)
209 Rod photoreceptor (Barnes and Hille 1989, Publio et al. 2006, Kourennyi and Liu et al. 2004)
210 Salamander retinal ganglian cells: morphology influences firing (Sheasby, Fohlmeister 1999)
211 Salamander retinal ganglion cell: ion channels (Fohlmeister, Miller 1997)
212 Self-organized olfactory pattern recognition (Kaplan & Lansner 2014)
213 Shaping NMDA spikes by timed synaptic inhibition on L5PC (Doron et al. 2017)
214 SN-MN neurons of Aplysia (Zhou et al. 2014)
215 Space clamp problems in neurons with voltage-gated conductances (Bar-Yehuda and Korngreen 2008)
216 Specific inhibition of dendritic plateau potential in striatal projection neurons (Du et al 2017)
217 Spike frequency adaptation in the LGMD (Peron and Gabbiani 2009)
218 Spike timing detection in different forms of LTD (Doi et al 2005)
219 Spine fusion and branching effects synaptic response (Rusakov et al 1996, 1997)
220 Spine neck plasticity controls postsynaptic calcium signals (Grunditz et al. 2008)
221 STDP and BDNF in CA1 spines (Solinas et al. 2019)
222 STDP depends on dendritic synapse location (Letzkus et al. 2006)
223 Stochastic automata network Markov model descriptors of coupled Ca2+ channels (Nguyen et al. 2005)
224 Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018)
225 Studies of stimulus parameters for seizure disruption using NN simulations (Anderson et al. 2007)
226 Study of augmented Rubin and Terman 2004 deep brain stim. model in Parkinsons (Pascual et al. 2006)
227 Subiculum network model with dynamic chloride/potassium homeostasis (Buchin et al 2016)
228 Synaptic gating at axonal branches, and sharp-wave ripples with replay (Vladimirov et al. 2013)
229 Temperature-Dependent Pyloric Pacemaker Kernel (Caplan JS et al., 2014)
230 Temporal decorrelation by intrinsic cellular dynamics (Wang et al 2003)
231 Temporal integration by stochastic recurrent network (Okamoto et al. 2007)
232 Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996)
233 The dynamics underlying pseudo-plateau bursting in a pituitary cell model (Teka et al. 2011)
234 The origin of different spike and wave-like events (Hall et al 2017)
235 The relationship between two fast/slow analysis techniques for bursting oscill. (Teka et al. 2012)
236 Theta phase precession in a model CA3 place cell (Baker and Olds 2007)
237 Tonic neuron in spinal lamina I: prolongation of subthreshold depol. (Prescott and De Koninck 2005)
238 Transmitter release and Ca diffusion models (Yamada and Zucker 1992)
239 Unbalanced peptidergic inhibition in superficial cortex underlies seizure activity (Hall et al 2015)
240 Understanding how fast activating K+ channels promote bursting in pituitary cells (Vo et al 2014)
241 Using Strahler`s analysis to reduce realistic models (Marasco et al, 2013)
242 Ventricular cell model (Luo Rudy dynamic model) (Luo Rudy 1994) used in (Wang et al 2006) (XPP)
243 VTA dopamine neuron (Tarfa, Evans, and Khaliq 2017)