SenseLab

Computational model (s) having Gaba as Model Neurotransmitters


 
Name
1 3D olfactory bulb: operators (Migliore et al, 2015)
2 A cortico-cerebello-thalamo-cortical loop model under essential tremor (Zhang & Santaniello 2019)
3 A focal seizure model with ion concentration changes (Gentiletti et al., accepted)
4 A Moth MGC Model-A HH network with quantitative rate reduction (Buckley & Nowotny 2011)
5 A multilayer cortical model to study seizure propagation across microdomains (Basu et al. 2015)
6 A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (CellML)
7 A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (SBML)
8 A neural mass model for critical assessment of brain connectivity (Ursino et al 2020)
9 A NN with synaptic depression for testing the effects of connectivity on dynamics (Jacob et al 2019)
10 A sensorimotor-spinal cord model (Hoshino et al. 2022)
11 ACnet23 primary auditory cortex model (Beeman et al 2019)
12 An attractor network model of grid cells and theta-nested gamma oscillations (Pastoll et al 2013)
13 Application of a common kinetic formalism for synaptic models (Destexhe et al 1994)
14 Ave. neuron model for slow-wave sleep in cortex Tatsuki 2016 Yoshida 2018 Rasmussen 2017 (all et al)
15 Axonal subthreshold voltage signaling along hippocampal mossy fiber (Kamiya 2022)
16 Basal ganglia network model of subthalamic deep brain stimulation (Hahn and McIntyre 2010)
17 Basket cell extrasynaptic inhibition modulates network oscillations (Proddutur et al., 2013)
18 Biologically Constrained Basal Ganglia model (BCBG model) (Lienard, Girard 2014)
19 Biophysical modeling of pathological brain states (Sudhakar et al 2019)
20 Ca+/HCN channel-dependent persistent activity in multiscale model of neocortex (Neymotin et al 2016)
21 CA1 pyramidal neuron: dendritic Ca2+ inhibition (Muellner et al. 2015)
22 CA1 pyramidal neuron: depolarization block (Bianchi et al. 2012)
23 CA1 pyramidal neuron: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018)
24 CA1 pyramidal neuron: rebound spiking (Ascoli et al.2010)
25 CA3 pyramidal neuron (Safiulina et al. 2010)
26 Cerebellar granular layer (Maex and De Schutter 1998)
27 Cerebellar Model for the Optokinetic Response (Kim and Lim 2021)
28 Cerebellar nuclear neuron (Sudhakar et al., 2015)
29 Cerebellar Nucleus Neuron (Steuber, Schultheiss, Silver, De Schutter & Jaeger, 2010)
30 Cholinergic and nicotinic regulation of DA neuron firing (Morozova et al 2020)
31 Cl- homeostasis in immature hippocampal CA3 neurons (Kolbaev et al 2020)
32 Coding of stimulus frequency by latency in thalamic networks (Golomb et al 2005)
33 Coincident glutamatergic depolarization effects on Cl- dynamics (Lombardi et al, 2021)
34 Comparison of full and reduced globus pallidus models (Hendrickson 2010)
35 Competition model of pheromone ratio detection (Zavada et al. 2011)
36 Composite spiking network/neural field model of Parkinsons (Kerr et al 2013)
37 Computational neuropharmacology of CA1 pyramidal neuron (Ferrante et al. 2008)
38 Computer model of clonazepam's effect in thalamic slice (Lytton 1997)
39 Conductance-based model of Layer-4 in the barrel cortex (Argaman et Golomb 2017)
40 Cortex-Basal Ganglia-Thalamus network model (Kumaravelu et al. 2016)
41 Cortical Basal Ganglia Network Model during Closed-loop DBS (Fleming et al 2020)
42 Cortical Interneuron & Pyramidal Cell Model of Cortical Spreading Depression (Stein & Harris 2022)
43 Cortical model with reinforcement learning drives realistic virtual arm (Dura-Bernal et al 2015)
44 Cortical network model of posttraumatic epileptogenesis (Bush et al 1999)
45 CRH modulates excitatory transmission and network physiology in hippocampus (Gunn et al. 2017)
46 DBS of a multi-compartment model of subthalamic nucleus projection neurons (Miocinovic et al. 2006)
47 Deconstruction of cortical evoked potentials generated by subthalamic DBS (Kumaravelu et al 2018)
48 Default mode network model (Matsui et al 2014)
49 Dendritic signals command firing dynamics in a Cerebellar Purkinje Cell model (Genet et al. 2010)
50 Dentate Basket Cell: spatial summation of inhibitory synaptic inputs (Bartos et al 2001)
51 Dentate Gyrus Feed-forward inhibition (Ferrante et al. 2009)
52 Dentate gyrus network model pattern separation and granule cell scaling in epilepsy (Yim et al 2015)
53 DG adult-born granule cell: nonlinear a5-GABAARs control AP firing (Lodge et al, accepted)
54 Distal inhibitory control of sensory-evoked excitation (Egger, Schmitt et al. 2015)
55 Distance-dependent inhibition in the hippocampus (Strüber et al. 2017)
56 Distinct integration properties of noisy inputs in active dendritic subunits (Poleg-Polsky 2019)
57 Duration-tuned neurons from the inferior colliculus of the big brown bat (Aubie et al. 2009)
58 Duration-tuned neurons from the inferior colliculus of vertebrates (Aubie et al. 2012)
59 Dynamic dopamine modulation in the basal ganglia: Learning in Parkinson (Frank et al 2004,2005)
60 Effects of Chloride accumulation and diffusion on GABAergic transmission (Jedlicka et al 2011)
61 Effects of increasing CREB on storage and recall processes in a CA1 network (Bianchi et al. 2014)
62 Efficient Method for Computing Synaptic Conductance (Destexhe et al 1994)
63 Electrical activity of the suprachiasmatic nuclei (Stinchcombe et al. 2017)
64 Electrostimulation to reduce synaptic scaling driven progression of Alzheimers (Rowan et al. 2014)
65 ELL Medium Ganglion cell (Muller et al 2019)
66 Emergence of physiological oscillation frequencies in neocortex simulations (Neymotin et al. 2011)
67 Epilepsy may be caused by very small functional changes in ion channels (Thomas et al. 2009)
68 Excitability of DA neurons and their regulation by synaptic input (Morozova et al. 2016a, 2016b)
69 Excitotoxic loss of dopaminergic cells in PD (Muddapu et al 2019)
70 Factors contribution to GDP-induced [Cl-]i transients (Lombardi et al 2019)
71 Frog second-order vestibular neuron models (Rossert et al. 2011)
72 Functional balanced networks with synaptic plasticity (Sadeh et al, 2015)
73 Gap junction coupled network of striatal fast spiking interneurons (Hjorth et al. 2009)
74 Gap junction plasticity as a mechanism to regulate network-wide oscillations (Pernelle et al 2018)
75 Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010)
76 H-currents effect on the fluctuation of gamma/beta oscillations (Avella-Gonzalez et al., 2015)
77 Hippocampal basket cell gap junction network dynamics (Saraga et al. 2006)
78 Hippocampal CA1 NN with spontaneous theta, gamma: full scale & network clamp (Bezaire et al 2016)
79 Hippocampal CA1 pyramidal cell demonstrating dynamic mode switching (Berteau & Bullock 2020)
80 Hippocampal CA3 network and circadian regulation (Stanley et al. 2013)
81 Hippocampus CA1 Interneuron Specific 3 (IS3) in vivo-like virtual NN simulations (Luo et al 2020)
82 Human sleep/wake cycle (Rempe et al. 2010)
83 Hybrid oscillatory interference / continuous attractor NN of grid cell firing (Bush & Burgess 2014)
84 Ih tunes oscillations in an In Silico CA3 model (Neymotin et al. 2013)
85 In silico hippocampal modeling for multi-target pharmacotherapy in schizophrenia (Sherif et al 2020)
86 Inferior Olive, subthreshold oscillations (Torben-Nielsen, Segev, Yarom 2012)
87 Inhibition and glial-K+ interaction leads to diverse seizure transition modes (Ho & Truccolo 2016)
88 Inhibitory network bistability explains increased activity prior to seizure onset (Rich et al 2020)
89 Initiation of spreading depolarization by GABAergic neuron hyperactivity & NaV 1.1 (Chever et al 21)
90 Interacting synaptic conductances during, distorting, voltage clamp (Poleg-Polsky and Diamond 2011)
91 Inverse stochastic resonance of cerebellar Purkinje cell (Buchin et al. 2016)
92 Ketamine disrupts theta modulation of gamma in a computer model of hippocampus (Neymotin et al 2011)
93 Kinetic synaptic models applicable to building networks (Destexhe et al 1998)
94 KInNeSS : a modular framework for computational neuroscience (Versace et al. 2008)
95 L4 cortical barrel NN model receiving thalamic input during whisking or touch (Gutnisky et al. 2017)
96 L5 cortical neurons with recreated synaptic inputs in vitro correlation transfer (Linaro et al 2019)
97 L5 PFC pyramidal neurons (Papoutsi et al. 2017)
98 Large scale model of the olfactory bulb (Yu et al., 2013)
99 Large scale neocortical model for PGENESIS (Crone et al 2019)
100 Large-scale model of neocortical slice in vitro exhibiting persistent gamma (Tomsett et al. 2014)
101 Layer V PFC pyramidal neuron used to study persistent activity (Sidiropoulou & Poirazi 2012)
102 Layer V pyramidal cell functions and schizophrenia genetics (Mäki-Marttunen et al 2019)
103 LCN-HippoModel: model of CA1 PCs deep-superficial theta firing dynamics (Navas-Olive et al 2020)
104 Leaky Integrate and Fire Neuron Model of Context Integration (Calvin, Redish accepted)
105 Learning intrinsic excitability in Medium Spiny Neurons (Scheler 2014)
106 Levodopa-Induced Toxicity in Parkinson's Disease (Muddapu et al, 2022)
107 LFP in striatum (Tanaka & Nakamura 2019)
108 LGMD Variability and logarithmic compression in dendrites (Jones and Gabbiani, 2012, 2012B)
109 Locust olfactory network with GGN and full KC population in the mushroom body (Ray et al 2020)
110 Logarithmic distributions prove that intrinsic learning is Hebbian (Scheler 2017)
111 MEG of Somatosensory Neocortex (Jones et al. 2007)
112 Microcircuits of L5 thick tufted pyramidal cells (Hay & Segev 2015)
113 Model for concentration invariant odor coding based on primacy hypothesis (Wilson et al 2017)
114 Model of the cerebellar granular network (Sudhakar et al 2017)
115 Model of the Xenopus tadpole swimming spinal network (Roberts et al. 2014)
116 Molecular layer interneurons in cerebellum encode valence in associative learning (Ma et al 2020)
117 Motor Cortex Connectivity & Event Related Desynchronization Based on Neural Mass Models (Ursino 21)
118 Motor cortex microcircuit simulation based on brain activity mapping (Chadderdon et al. 2014)
119 Motor system model with reinforcement learning drives virtual arm (Dura-Bernal et al 2017)
120 Mouse Episodic and Continuous Locomotion CPG (Sharples et al, accepted)
121 Multiplication by NMDA receptors in Direction Selective Ganglion cells (Poleg-Polsky & Diamond 2016)
122 Multiscale model of excitotoxicity in PD (Muddapu and Chakravarthy 2020)
123 Multitarget pharmacology for Dystonia in M1 (Neymotin et al 2016)
124 Na channel mutations in the dentate gyrus (Thomas et al. 2009)
125 Neural Mass Model for relationship between Brain Rhythms + Functional Connectivity (Ricci et al '21)
126 Neural mass model of the neocortex under sleep regulation (Costa et al 2016)
127 Nicotinic control of dopamine release in nucleus accumbens (Maex et al. 2014)
128 NMDAR & GABAB/KIR Give Bistable Dendrites: Working Memory & Sequence Readout (Sanders et al., 2013)
129 Noise promotes independent control of gamma oscillations and grid firing (Solanka et al 2015)
130 Nonlinear dendritic processing in barrel cortex spiny stellate neurons (Lavzin et al. 2012)
131 Numerical Integration of Izhikevich and HH model neurons (Stewart and Bair 2009)
132 Olfactory bulb granule cell: effects of odor deprivation (Saghatelyan et al 2005)
133 Olfactory bulb microcircuits model with dual-layer inhibition (Gilra & Bhalla 2015)
134 Olfactory bulb mitral and granule cell column formation (Migliore et al. 2007)
135 Olfactory bulb mitral and granule cell: dendrodendritic microcircuits (Migliore and Shepherd 2008)
136 Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
137 Olfactory Bulb Network (Davison et al 2003)
138 Olfactory Computations in Mitral-Granule cell circuits (Migliore & McTavish 2013)
139 Optimal deep brain stimulation of the subthalamic nucleus-a computational study (Feng et al. 2007)
140 Orientation preference in L23 V1 pyramidal neurons (Park et al 2019)
141 Orientation selectivity in inhibition-dominated recurrent networks (Sadeh and Rotter, 2015)
142 Oscillations emerging from noise-driven NNs (Tchumatchenko & Clopath 2014)
143 Paired turbulence and light effect on calcium increase in Hermissenda (Blackwell 2004)
144 Pallidostriatal projections promote beta oscillations (Corbit, Whalen, et al 2016)
145 Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
146 Parametric computation and persistent gamma in a cortical model (Chambers et al. 2012)
147 Patterns of synchronization in 2D networks of inhibitory neurons (Miller et al, accepted)
148 Perceptual judgments via sensory-motor interaction assisted by cortical GABA (Hoshino et al 2018)
149 Persistent synchronized bursting activity in cortical tissues (Golomb et al 2005)
150 Pipette and membrane patch geometry effects on GABAa currents patch-clamp exps (Moroni et al. 2011)
151 Piriform cortex network model with multicompartment neurons for cell assemblies (Traub et al 2021)
152 piriform plus endopiriform circuit model. Pyramidal cells, multipolar neurons, interneurons.
153 Prosthetic electrostimulation for information flow repair in a neocortical simulation (Kerr 2012)
154 Pyramidal neuron, fast, regular, and irregular spiking interneurons (Konstantoudaki et al 2014)
155 Rapid desynchronization of an electrically coupled Golgi cell network (Vervaeke et al. 2010)
156 Reconstrucing sleep dynamics with data assimilation (Sedigh-Sarvestani et al., 2012)
157 Reducing variability in motor cortex activity by GABA (Hoshino et al. 2019)
158 Reinforcement learning of targeted movement (Chadderdon et al. 2012)
159 Respiratory central pattern generator (mammalian brainstem) (Rubin & Smith 2019)
160 Respiratory central pattern generator including Kolliker-Fuse nucleus (Wittman et al 2019)
161 Respiratory central pattern generator network in mammalian brainstem (Rubin et al. 2009)
162 Robust transmission in the inhibitory Purkinje Cell to Cerebellar Nuclei pathway (Abbasi et al 2017)
163 Role for short term plasticity and OLM cells in containing spread of excitation (Hummos et al 2014)
164 Roles of subthalamic nucleus and DBS in reinforcement conflict-based decision making (Frank 2006)
165 SCZ-associated variant effects on L5 pyr cell NN activity and delta osc. (Maki-Marttunen et al 2018)
166 Sensorimotor cortex reinforcement learning of 2-joint virtual arm reaching (Neymotin et al. 2013)
167 Sensory-evoked responses of L5 pyramidal tract neurons (Egger et al 2020)
168 Shaping NMDA spikes by timed synaptic inhibition on L5PC (Doron et al. 2017)
169 Short Term Depression, Presynaptic Inhib., Neuron Diversity Roles in Antennal Lobe (Wei & Lo 2020)
170 Simulated cortical color opponent receptive fields self-organize via STDP (Eguchi et al., 2014)
171 Simulations of modulation of HCN channels in L5PCs (Mäki-Marttunen and Mäki-Marttunen accepted)
172 Single compartment: nonlinear a5-GABAAR controls synaptic NMDAR activation (Schulz et al 2018)
173 Single-cell comprehensive biophysical model of SN pars compacta (Muddapu & Chakravarthy 2021)
174 Spatial constrains of GABAergic rheobase shift (Lombardi et al., accepted)
175 Specific inhibition of dendritic plateau potential in striatal projection neurons (Du et al 2017)
176 Spiking GridPlaceMap model (Pilly & Grossberg, PLoS One, 2013)
177 Spiking neuron model of the basal ganglia (Humphries et al 2006)
178 State dependent drug binding to sodium channels in the dentate gyrus (Thomas & Petrou 2013)
179 Status epilepticus alters dentate basket cell tonic inhibition (Yu J et al 2013)
180 Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018)
181 Striatal FSI and SPN oscillation model (Chartove et al. 2020)
182 Striatal GABAergic microcircuit, dopamine-modulated cell assemblies (Humphries et al. 2009)
183 Striatal GABAergic microcircuit, spatial scales of dynamics (Humphries et al, 2010)
184 Striatal NN model of MSNs and FSIs investigated effects of dopamine depletion (Damodaran et al 2015)
185 Striatal Spiny Projection Neuron, inhibition enhances spatial specificity (Dorman et al 2018)
186 Striatum D1 Striosome and Matrix Upstates (Prager et al., 2020)
187 Structure-dynamics relationships in bursting neuronal networks revealed (Mäki-Marttunen et al. 2013)
188 Subiculum network model with dynamic chloride/potassium homeostasis (Buchin et al 2016)
189 Surround Suppression in V1 via Withdraw of Balanced Local Excitation in V1 (Shushruth 2012)
190 Syn Plasticity Regulation + Information Processing in Neuron-Astrocyte Networks (Vuillaume et al 21)
191 Synaptic gating at axonal branches, and sharp-wave ripples with replay (Vladimirov et al. 2013)
192 Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009)
193 Synaptic scaling balances learning in a spiking model of neocortex (Rowan & Neymotin 2013)
194 Synthesis of spatial tuning functions from theta cell spike trains (Welday et al., 2011)
195 Thalamic network model of deep brain stimulation in essential tremor (Birdno et al. 2012)
196 Thalamic neuron, zebra finch DLM: Integration of pallidal and cortical inputs (Goldberg et al. 2012)
197 Thalamic quiescence of spike and wave seizures (Lytton et al 1997)
198 Thalamocortical loop with delay for investigation of absence epilepsy (Liu et al 2019)
199 Thalamocortical augmenting response (Bazhenov et al 1998)
200 Thalamocortical control of propofol phase-amplitude coupling (Soplata et al 2017)
201 Thalamocortical model of spike and wave seizures (Suffczynski et al. 2004)
202 Theta phase precession in a model CA3 place cell (Baker and Olds 2007)
203 Two-neuron conductance-based model with dynamic ion concentrations to study NaV1.1 channel mutations
204 Vertical System (VS) tangential cells network model (Trousdale et al. 2014)
205 VTA dopamine neuron (Tarfa, Evans, and Khaliq 2017)
206 Wang-Buzsaki Interneuron (Talathi et al., 2010)