Computational model (s) having Signaling pathways as Model Concept

1 A kinetic model of dopamine- and calcium-dependent striatal synaptic plasticity (Nakano et al. 2010)
2 A model of cerebellar LTD including RKIP inactivation of Raf and MEK (Hepburn et al 2017)
3 A modified Morris-Lecar with TRPC4 & GIRK (Tian et al. 2022)
4 A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (CellML)
5 A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (SBML)
6 A systems model of Parkinson’s disease using biochemical systems theory (Sasidharakurup et al. 2017)
7 Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018)
8 An allosteric kinetics of NMDARs in STDP (Urakubo et al. 2008)
9 An integrative dynamic model of brain energy metabolism (Coultier et al 2009)
10 Biochemical Systems Theory Model of SARS-CoV-2 infection network (Sasidharakurup et al., 2021)
11 Boolean network-based analysis of the apoptosis network (Mai and Liu 2009)
12 Ca(2+) oscillations based on Ca-induced Ca-release (Dupont et al 1991)
13 Ca+/HCN channel-dependent persistent activity in multiscale model of neocortex (Neymotin et al 2016)
14 CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007)
15 CA1 pyramidal cell receptor dependent cAMP dynamics (Chay et al. 2016)
16 Ca2+ oscillations in single astrocytes (Lavrentovich and Hemkin 2008) (python) (Manninen et al 2017)
17 Ca2+ requirements for Long-Term Depression in Purkinje Cells (Criseida Zamora et al 2018)
18 Calcium waves and mGluR-dependent synaptic plasticity in CA1 pyr. neurons (Ashhad & Narayanan 2013)
19 CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007)
20 Cell signaling/ion channel variability effects on neuronal response (Anderson, Makadia, et al. 2015)
21 Computational modeling of gephyrin-dependent inhibitory transsynaptic signaling (Lupascu et al 2020)
22 Computational Modelling of TNFalpha Pathway in Parkinson's Disease (Sasidharakurup et al 2019)
23 Dendritic spine geometry, spine apparatus organization: spatiotemporal Ca dynamics (Bell et al 2019)
24 Differential interactions between Notch and ID factors control neurogenesis (Boareto et al 2017)
25 Discrimination on behavioral time-scales mediated by reaction-diffusion in dendrites (Bhalla 2017)
26 Dopamine activation of signaling pathways in a medium spiny projection neuron (Oliveira et al. 2012)
27 Emergent properties of networks of biological signaling pathways (Bhalla, Iyengar 1999)
28 Endocannabinoid dynamics gate spike-timing dependent depression and potentiation (Cui et al 2016)
29 Endothelin action on pituitary latotrophs (Bertram et al. 2006)
30 Excitation-contraction coupling/mitochondrial energetics (ECME) model (Cortassa et al. 2006)
31 Firing neocortical layer V pyramidal neuron (Reetz et al. 2014; Stadler et al. 2014)
32 Genetic, biochemical and bioelectrical dynamics in pattern regulation (Pietak & Levin 2017)
33 Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017)
34 Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011)
35 Gq coupled signaling pathways involved in striatal synaptic plasticity (Kim et al. 2013)
36 Hippocampus CA1: Simulations of LTP signaling pathways (Kim M et al. 2011)
37 Hippocampus CA1: Temporal sensitivity of signaling pathways underlying LTP (Kim et al. 2010)
38 Long term potentiation, LTP, protein synthesis, proteasome (Smolen et al. 2018)
39 Model of a BDNF feedback loop (Zhang et al 2016)
40 Model of AngII signaling and membrane electrophysiology (Makadia, Anderson, Fey et al., 2015)