1 |
A kinetic model of dopamine- and calcium-dependent striatal synaptic plasticity (Nakano et al. 2010) |
2 |
A model of cerebellar LTD including RKIP inactivation of Raf and MEK (Hepburn et al 2017) |
3 |
A modified Morris-Lecar with TRPC4 & GIRK (Tian et al. 2022) |
4 |
A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (CellML) |
5 |
A multiscale approach to analyze circadian rhythms (Vasalou & Henson, 2010) (SBML) |
6 |
A systems model of Parkinson’s disease using biochemical systems theory (Sasidharakurup et al. 2017) |
7 |
Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018) |
8 |
An allosteric kinetics of NMDARs in STDP (Urakubo et al. 2008) |
9 |
An integrative dynamic model of brain energy metabolism (Coultier et al 2009) |
10 |
Biochemical Systems Theory Model of SARS-CoV-2 infection network (Sasidharakurup et al., 2021) |
11 |
Boolean network-based analysis of the apoptosis network (Mai and Liu 2009) |
12 |
Ca(2+) oscillations based on Ca-induced Ca-release (Dupont et al 1991) |
13 |
Ca+/HCN channel-dependent persistent activity in multiscale model of neocortex (Neymotin et al 2016) |
14 |
CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007) |
15 |
CA1 pyramidal cell receptor dependent cAMP dynamics (Chay et al. 2016) |
16 |
Ca2+ oscillations in single astrocytes (Lavrentovich and Hemkin 2008) (python) (Manninen et al 2017) |
17 |
Ca2+ requirements for Long-Term Depression in Purkinje Cells (Criseida Zamora et al 2018) |
18 |
Calcium waves and mGluR-dependent synaptic plasticity in CA1 pyr. neurons (Ashhad & Narayanan 2013) |
19 |
CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007) |
20 |
Cell signaling/ion channel variability effects on neuronal response (Anderson, Makadia, et al. 2015) |
21 |
Computational modeling of gephyrin-dependent inhibitory transsynaptic signaling (Lupascu et al 2020) |
22 |
Computational Modelling of TNFalpha Pathway in Parkinson's Disease (Sasidharakurup et al 2019) |
23 |
Dendritic spine geometry, spine apparatus organization: spatiotemporal Ca dynamics (Bell et al 2019) |
24 |
Differential interactions between Notch and ID factors control neurogenesis (Boareto et al 2017) |
25 |
Discrimination on behavioral time-scales mediated by reaction-diffusion in dendrites (Bhalla 2017) |
26 |
Dopamine activation of signaling pathways in a medium spiny projection neuron (Oliveira et al. 2012) |
27 |
Emergent properties of networks of biological signaling pathways (Bhalla, Iyengar 1999) |
28 |
Endocannabinoid dynamics gate spike-timing dependent depression and potentiation (Cui et al 2016) |
29 |
Endothelin action on pituitary latotrophs (Bertram et al. 2006) |
30 |
Excitation-contraction coupling/mitochondrial energetics (ECME) model (Cortassa et al. 2006) |
31 |
Firing neocortical layer V pyramidal neuron (Reetz et al. 2014; Stadler et al. 2014) |
32 |
Genetic, biochemical and bioelectrical dynamics in pattern regulation (Pietak & Levin 2017) |
33 |
Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017) |
34 |
Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011) |
35 |
Gq coupled signaling pathways involved in striatal synaptic plasticity (Kim et al. 2013) |
36 |
Hippocampus CA1: Simulations of LTP signaling pathways (Kim M et al. 2011) |
37 |
Hippocampus CA1: Temporal sensitivity of signaling pathways underlying LTP (Kim et al. 2010) |
38 |
Long term potentiation, LTP, protein synthesis, proteasome (Smolen et al. 2018) |
39 |
Model of a BDNF feedback loop (Zhang et al 2016) |
40 |
Model of AngII signaling and membrane electrophysiology (Makadia, Anderson, Fey et al., 2015) |