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Networks of spiking neurons: a review of tools and strategies (Brette et al. 2007)
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This package provides a series of codes that simulate networks of spiking neurons (excitatory and inhibitory, integrate-and-fire or Hodgkin-Huxley type, current-based or conductance-based synapses; some of them are event-based). The same networks are implemented in different simulators (NEURON, GENESIS, NEST, NCS, CSIM, XPP, SPLIT, MVAspike; there is also a couple of implementations in SciLab and C++).
The codes included in this package are benchmark simulations; see
the associated review paper (Brette et al. 2007). The
main goal is to provide a series of benchmark simulations of
networks of spiking neurons, and demonstrate how these are implemented in the
different simulators overviewed in the paper. See also details in the
enclosed file Appendix2.pdf, which describes these different
benchmarks. Some of these benchmarks were based on the
Vogels-Abbott model (Vogels TP and Abbott LF 2005).
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Abstract integrate-and-fire leaky neuron Show
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Vogels TP, Abbott LF (2005) Show
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Brette R, Rudolph M, Carnevale T, Hines M, Beeman D, Bower JM, Diesmann M, Morrison A, Goodman PH, Harris FC, Zirpe M, Natschläger T, Pecevski D, Ermentrout B, Djurfeldt M, Lansner A, Rochel O, Vieville T, Muller E, Davison AP, El Boustani S, Destexhe A (2007) Show
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Carnevale, Ted [Ted.Carnevale at Yale.edu] Show
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Hines, Michael [Michael.Hines at Yale.edu] Show
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Davison, Andrew [Andrew.Davison at iaf.cnrs-gif.fr] Show
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Destexhe, Alain [Destexhe at iaf.cnrs-gif.fr] Show
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Ermentrout, Bard [bard_at_pitt.edu] Show
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Brette R Show
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Bower, James Show
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Beeman, Dave Show
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Diesmann M Show
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Morrison A Show
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Goodman PH Show
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Harris Jr, FC Show
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Zirpe M Show
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Natschlager T Show
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Pecevski D Show
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Djurfeldt M Show
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Lansner, Anders [ala at kth.se] Show
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Rochel O Show
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Vieville T Show
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Muller E Show
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El Boustani, Sami [elboustani at unic.cnrs-gif.fr] Show
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Rudolph M Show
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generic cortical neurons, integrate and fire, HH
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many different simulators
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