Circuits that contain the Model Concept : Activity Patterns

(The model is used to investigate spatial and/or temporal patterns of spiking activity.)
Re-display model names with descriptions
1. 3D model of the olfactory bulb (Migliore et al. 2014)
2. 3D olfactory bulb: operators (Migliore et al, 2015)
3. A detailed data-driven network model of prefrontal cortex (Hass et al 2016)
4. A dynamical model of the basal ganglia (Leblois et al 2006)
5. A microcircuit model of the frontal eye fields (Heinzle et al. 2007)
6. A model of the temporal pattern generator of C. elegans egg-laying behavior (Zhang et. al 2010)
7. A Moth MGC Model-A HH network with quantitative rate reduction (Buckley & Nowotny 2011)
8. A multilayer cortical model to study seizure propagation across microdomains (Basu et al. 2015)
9. A network model of tail withdrawal in Aplysia (White et al 1993)
10. A network of AOB mitral cells that produces infra-slow bursting (Zylbertal et al. 2017)
11. A simulation method for the firing sequences of motor units (Jiang et al 2006)
12. A single column thalamocortical network model (Traub et al 2005)
13. A spatial model of the intermediate superior colliculus (Moren et. al. 2013)
14. A spiking model of cortical broadcast and competition (Shanahan 2008)
15. A spiking neural network model of the Lateral Geniculate Nucleus (Sen-Bhattacharya et al 2017)
16. A theory of ongoing activity in V1 (Goldberg et al 2004)
17. A two networks model of connectivity-dependent oscillatory activity (Avella OJ et al. 2014)
18. A unified thalamic model of multiple distinct oscillations (Li, Henriquez and Fröhlich 2017)
19. ACh modulation in olfactory bulb and piriform cortex (de Almeida et al. 2013;Devore S, et al. 2014)
20. Activity patterns in a subthalamopallidal network of the basal ganglia model (Terman et al 2002)
21. An attractor network model of grid cells and theta-nested gamma oscillations (Pastoll et al., 2013)
22. An oscillatory neural model of multiple object tracking (Kazanovich and Borisyuk 2006)
23. Asynchronous irregular and up/down states in excitatory and inhibitory NNs (Destexhe 2009)
24. Auditory cortex layer IV network model (Beeman 2013)
25. Axonal gap junctions produce fast oscillations in cerebellar Purkinje cells (Traub et al. 2008)
26. Basal ganglia network model of subthalamic deep brain stimulation (Hahn and McIntyre 2010)
27. Basal ganglia-thalamic network model for deep brain stimulation (So et al. 2011)
28. Biologically-plausible models for spatial navigation (Cannon et al 2003)
29. Biophysically realistic neural modeling of the MEG mu rhythm (Jones et al. 2009)
30. Broadening of activity with flow across neural structures (Lytton et al. 2008)
31. Bursting and oscillations in RD1 Retina driven by AII Amacrine Neuron (Choi et al. 2014)
32. Bursting respiratory net: clustered architecture gives large phase diff`s (Fietkiewicz et al 2011)
33. Ca+/HCN channel-dependent persistent activity in multiscale model of neocortex (Neymotin et al 2016)
34. CA1 pyramidal cell: reconstructed axonal arbor and failures at weak gap junctions (Vladimirov 2011)
35. CA1 pyramidal cells, basket cells, ripples (Malerba et al 2016)
36. CA1 pyramidal neuron network model (Ferguson et al 2015)
37. Ca2+-activated I_CAN and synaptic depression promotes network-dependent oscil. (Rubin et al. 2009)
38. CA3 Network Model of Epileptic Activity (Sanjay et. al, 2015)
39. Cancelling redundant input in ELL pyramidal cells (Bol et al. 2011)
40. Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
41. Cerebellar gain and timing control model (Yamazaki & Tanaka 2007)(Yamazaki & Nagao 2012)
42. Cerebellar granular layer (Maex and De Schutter 1998)
43. Changes of ionic concentrations during seizure transitions (Gentiletti et al. 2016)
44. Classic model of the Tritonia Swim CPG (Getting, 1989)
45. Collection of simulated data from a thalamocortical network model (Glabska, Chintaluri, Wojcik 2017)
46. Competition for AP initiation sites in a circuit controlling simple learning (Cruz et al. 2007)
47. Composite spiking network/neural field model of Parkinsons (Kerr et al 2013)
48. Computational analysis of NN activity and spatial reach of sharp wave-ripples (Canakci et al 2017)
49. Computational aspects of feedback in neural circuits (Maass et al 2006)
50. Computational Model of a Central Pattern Generator (Cataldo et al 2006)
51. Computer model of clonazepam`s effect in thalamic slice (Lytton 1997)
52. Computing with neural synchrony (Brette 2012)
53. Continuous lateral oscillations as a mechanism for taxis in Drosophila larvae (Wystrach et al 2016)
54. Convergence regulates synchronization-dependent AP transfer in feedforward NNs (Sailamul et al 2017)
55. Cortex-Basal Ganglia-Thalamus network model (Kumaravelu et al. 2016)
56. Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017)
57. Current Dipole in Laminar Neocortex (Lee et al. 2013)
58. Dentate Gyrus Feed-forward inhibition (Ferrante et al. 2009)
59. Dentate gyrus network model (Santhakumar et al 2005)
60. Dentate gyrus network model (Tejada et al 2014)
61. Dentate gyrus network model pattern separation and granule cell scaling in epilepsy (Yim et al 2015)
62. Different roles for inhibition in the rhythm-generating respiratory network (Harris et al 2017)
63. Distance-dependent inhibition in the hippocampus (Strüber et al. 2017)
64. Duration-tuned neurons from the inferior colliculus of the big brown bat (Aubie et al. 2009)
65. Dynamic cortical interlaminar interactions (Carracedo et al. 2013)
66. Emergence of physiological oscillation frequencies in neocortex simulations (Neymotin et al. 2011)
67. Encoding and retrieval in a model of the hippocampal CA1 microcircuit (Cutsuridis et al. 2009)
68. Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010)
69. Excitatory and inhibitory interactions in populations of model neurons (Wilson and Cowan 1972)
70. Failure of Deep Brain Stimulation in a basal ganglia neuronal network model (Dovzhenok et al. 2013)
71. Fast global oscillations in networks of I&F neurons with low firing rates (Brunel and Hakim 1999)
72. Fast oscillations in inhibitory networks (Maex, De Schutter 2003)
73. Feedforward heteroassociative network with HH dynamics (Lytton 1998)
74. Formation of synfire chains (Jun and Jin 2007)
75. Functional consequences of cortical circuit abnormalities on gamma in schizophrenia (Spencer 2009)
76. Gamma and theta rythms in biophysical models of hippocampus circuits (Kopell et al. 2011)
77. Gamma oscillations in hippocampal interneuron networks (Bartos et al 2002)
78. Gamma oscillations in hippocampal interneuron networks (Wang, Buzsaki 1996)
79. Gap junction coupled network of striatal fast spiking interneurons (Hjorth et al. 2009)
80. Gap-junction coupled network activity depends on coupled dendrites diameter (Gansert et al. 2007)
81. Gating of steering signals through phasic modulation of reticulospinal neurons (Kozlov et al. 2014)
82. Generating coherent patterns of activity from chaotic neural networks (Sussillo and Abbott 2009)
83. Generating oscillatory bursts from a network of regular spiking neurons (Shao et al. 2009)
84. Grid cell oscillatory interference with noisy network oscillators (Zilli and Hasselmo 2010)
85. Grid cell spatial firing models (Zilli 2012)
86. Half-center oscillator database of leech heart interneuron model (Doloc-Mihu & Calabrese 2011)
87. High dimensional dynamics and low dimensional readouts in neural microcircuits (Haeusler et al 2006)
88. High frequency oscillations in a hippocampal computational model (Stacey et al. 2009)
89. High frequency stimulation of the Subthalamic Nucleus (Rubin and Terman 2004)
90. Hippocampal basket cell gap junction network dynamics (Saraga et al. 2006)
91. Hippocampal CA1 NN with spontaneous theta, gamma: full scale & network clamp (Bezaire et al 2016)
92. Hippocampal CA3 network and circadian regulation (Stanley et al. 2013)
93. Hippocampus temporo-septal engram shift model (Lytton 1999)
94. Homosynaptic plasticity in the tail withdrawal circuit (TWC) of Aplysia (Baxter and Byrne 2006)
95. Hopfield and Brody model (Hopfield, Brody 2000)
96. Hopfield and Brody model (Hopfield, Brody 2000) (NEURON+python)
97. Human Attentional Networks: A Connectionist Model (Wang and Fan 2007)
98. Hyperconnectivity, slow synapses in PFC mental retardation and autism model (Testa-Silva et al 2011)
99. I&F recurrent networks with current- or conductance-based synapses (Cavallari et al. 2014)
100. Ih tunes oscillations in an In Silico CA3 model (Neymotin et al. 2013)
101. Inferior Olive, subthreshold oscillations (Torben-Nielsen, Segev, Yarom 2012)
102. Information-processing in lamina-specific cortical microcircuits (Haeusler and Maass 2006)
103. Inhibition and glial-K+ interaction leads to diverse seizure transition modes (Ho & Truccolo 2016)
104. Inhibitory control by an integral feedback signal in prefrontal cortex (Miller and Wang 2006)
105. Interaction of leak and IMI conductance on the STG over broad temperature range (Stadele et al 2015)
106. Investigation of different targets in deep brain stimulation for Parkinson`s (Pirini et al. 2009)
107. Irregular oscillations produced by cyclic recurrent inhibition (Friesen, Friesen 1994)
108. Irregular spiking in NMDA-driven prefrontal cortex neurons (Durstewitz and Gabriel 2006)
109. Ketamine disrupts theta modulation of gamma in a computer model of hippocampus (Neymotin et al 2011)
110. KInNeSS : a modular framework for computational neuroscience (Versace et al. 2008)
111. Knox implementation of Destexhe 1998 spike and wave oscillation model (Knox et al 2018)
112. Laminar analysis of excitatory circuits in vibrissal motor and sensory cortex (Hooks et al. 2011)
113. Laminar connectivity matrix simulation (Weiler et al 2008)
114. Large cortex model with map-based neurons (Rulkov et al 2004)
115. Large scale model of the olfactory bulb (Yu et al., 2013)
116. Late emergence of the whisker direction selectivity map in rat barrel cortex (Kremer et al. 2011)
117. Lateral dendrodenditic inhibition in the Olfactory Bulb (David et al. 2008)
118. Leech Heart (HE) Motor Neuron conductances contributions to NN activity (Lamb & Calabrese 2013)
119. Leech heart interneuron network model (Hill et al 2001, 2002)
120. Linking dynamics of the inhibitory network to the input structure (Komarov & Bazhenov 2016)
121. Lobster STG pyloric network model with calcium sensor (Gunay & Prinz 2010) (Prinz et al. 2004)
122. Long time windows from theta modulated inhib. in entorhinal–hippo. loop (Cutsuridis & Poirazi 2015)
123. Loss of phase-locking in non-weakly coupled inhib. networks of type-I neurons (Oh and Matveev 2009)
124. MDD: the role of glutamate dysfunction on Cingulo-Frontal NN dynamics (Ramirez-Mahaluf et al 2017)
125. Mechanisms of very fast oscillations in axon networks coupled by gap junctions (Munro, Borgers 2010)
126. Medial reticular formation of the brainstem: anatomy and dynamics (Humphries et al. 2006, 2007)
127. Microsaccades and synchrony coding in the retina (Masquelier et al. 2016)
128. Mitral cell activity gating by respiration and inhibition in an olfactory bulb NN (Short et al 2016)
129. Model of arrhythmias in a cardiac cells network (Casaleggio et al. 2014)
130. Model of long range transmission of gamma oscillation (Murray 2007)
131. Model of the cerebellar granular network (Sudhakar et al 2017)
132. Modeling the effects of dopamine on network synchronization (Komek et al. 2012)
133. Modelling enteric neuron populations and muscle fed-state motor patterns (Chambers et al. 2011)
134. Models for cortical UP-DOWN states in a bistable inhibitory-stabilized network (Jercog et al 2017)
135. Modular grid cell responses as a basis for hippocampal remapping (Monaco and Abbott 2011)
136. Modulation of septo-hippocampal theta activity by GABAA receptors (Hajos et al. 2004)
137. Motion Clouds: Synthesis of random textures for motion perception (Leon et al. 2012)
138. Motor cortex microcircuit simulation based on brain activity mapping (Chadderdon et al. 2014)
139. Multiscale modeling of epileptic seizures (Naze et al. 2015)
140. Multisensory integration in the superior colliculus: a neural network model (Ursino et al. 2009)
141. Multistability of clustered states in a globally inhibitory network (Chandrasekaran et al. 2009)
142. Multitarget pharmacology for Dystonia in M1 (Neymotin et al 2016)
143. Neocort. pyramidal cells subthreshold somatic voltage controls spike propagation (Munro Kopell 2012)
144. Network bursts in cultured NN result from different adaptive mechanisms (Masquelier & Deco 2013)
145. Network model of the granular layer of the cerebellar cortex (Maex, De Schutter 1998)
146. Network model with neocortical architecture (Anderson et al 2007,2012; Azhar et al 2012)
147. Network recruitment to coherent oscillations in a hippocampal model (Stacey et al. 2011)
148. Network topologies for producing limited sustained activation (Kaiser and Hilgetag 2010)
149. Networks of spiking neurons: a review of tools and strategies (Brette et al. 2007)
150. Neural model of frog ventilatory rhythmogenesis (Horcholle-Bossavit and Quenet 2009)
151. Neural modeling of an internal clock (Yamazaki and Tanaka 2008)
152. Neural transformations on spike timing information (Tripp and Eliasmith 2007)
153. Neuronal population models of intracerebral EEG (Wendling et al. 2005)
154. Normal ripples, abnormal ripples, and fast ripples in a hippocampal model (Fink et al. 2015)
155. Norns - Neural Network Studio (Visser & Van Gils 2014)
156. Olfactory bulb mitral and granule cell column formation (Migliore et al. 2007)
157. Olfactory bulb mitral and granule cell: dendrodendritic microcircuits (Migliore and Shepherd 2008)
158. Olfactory bulb mitral cell gap junction NN model: burst firing and synchrony (O`Connor et al. 2012)
159. Olfactory bulb mitral cell: synchronization by gap junctions (Migliore et al 2005)
160. Olfactory Bulb mitral-granule network generates beta oscillations (Osinski & Kay 2016)
161. Olfactory Bulb Network (Davison et al 2003)
162. Olfactory bulb network model of gamma oscillations (Bathellier et al. 2006; Lagier et al. 2007)
163. Olfactory bulb network: neurogenetic restructuring and odor decorrelation (Chow et al. 2012)
164. Orientation selectivity in inhibition-dominated recurrent networks (Sadeh and Rotter, 2015)
165. Oscillation and coding in a proposed NN model of insect olfaction (Horcholle-Bossavit et al. 2007)
166. Oscillations emerging from noise-driven NNs (Tchumatchenko & Clopath 2014)
167. Oscillations, phase-of-firing coding and STDP: an efficient learning scheme (Masquelier et al. 2009)
168. Pallidostriatal projections promote beta oscillations (Corbit, Whalen, et al 2016)
169. Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018)
170. Parametric computation and persistent gamma in a cortical model (Chambers et al. 2012)
171. Persistent synchronized bursting activity in cortical tissues (Golomb et al 2005)
172. Perturbation sensitivity implies high noise and suggests rate coding in cortex (London et al. 2010)
173. Phase oscillator models for lamprey central pattern generators (Varkonyi et al. 2008)
174. Phase precession through acceleration of local theta rhythm (Castro & Aguiar 2011)
175. Polychronization: Computation With Spikes (Izhikevich 2005)
176. Population models of temporal differentiation (Tripp and Eliasmith 2010)
177. Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011)
178. Prosthetic electrostimulation for information flow repair in a neocortical simulation (Kerr 2012)
179. Pyramidal neuron, fast, regular, and irregular spiking interneurons (Konstantoudaki et al 2014)
180. Rapid desynchronization of an electrically coupled Golgi cell network (Vervaeke et al. 2010)
181. Reconstrucing sleep dynamics with data assimilation (Sedigh-Sarvestani et al., 2012)
182. Regulation of a slow STG rhythm (Nadim et al 1998)
183. Relative spike time coding and STDP-based orientation selectivity in V1 (Masquelier 2012)
184. Respiratory central pattern generator network in mammalian brainstem (Rubin et al. 2009)
185. Reverberatory bursts propagation and synchronization in developing cultured NNs (Huang et al 2016)
186. Reward modulated STDP (Legenstein et al. 2008)
187. Robust Reservoir Generation by Correlation-Based Learning (Yamazaki & Tanaka 2008)
188. Role for short term plasticity and OLM cells in containing spread of excitation (Hummos et al 2014)
189. S cell network (Moss et al 2005)
190. Scaling self-organizing maps to model large cortical networks (Bednar et al 2004)
191. Self-organized olfactory pattern recognition (Kaplan & Lansner 2014)
192. Sensitivity of noisy neurons to coincident inputs (Rossant et al. 2011)
193. Sensory feedback in an oscillatory interference model of place cell activity (Monaco et al. 2011)
194. Simulation studies on mechanisms of levetiracetam-mediated inhibition of IK(DR) (Huang et al. 2009)
195. Simulation system of spinal cord motor nuclei and assoc. nerves and muscles (Cisi and Kohn 2008)
196. Simulations of oscillations in piriform cortex (Wilson & Bower 1992)
197. Sleep-wake transitions in corticothalamic system (Bazhenov et al 2002)
198. Slow wave propagation in the guinea-pig gastric antrum (Hirst et al. 2006, Edwards and Hirst 2006)
199. Small world networks of Type I and Type II Excitable Neurons (Bogaard et al. 2009)
200. Software for teaching neurophysiology of neuronal circuits (Grisham et al. 2008)
201. Sparsely connected networks of spiking neurons (Brunel 2000)
202. Spike-Timing-Based Computation in Sound Localization (Goodman and Brette 2010)
203. Spikes,synchrony,and attentive learning by laminar thalamocort. circuits (Grossberg & Versace 2007)
204. Spiking GridPlaceMap model (Pilly & Grossberg, PLoS One, 2013)
205. Spiking neuron model of the basal ganglia (Humphries et al 2006)
206. State-dependent rhythmogenesis in a half-center locomotor CPG (Ausburn et al 2017)
207. STDP allows fast rate-modulated coding with Poisson-like spike trains (Gilson et al. 2011)
208. Striatal GABAergic microcircuit, dopamine-modulated cell assemblies (Humphries et al. 2009)
209. Striatal GABAergic microcircuit, spatial scales of dynamics (Humphries et al, 2010)
210. Striatal NN model of MSNs and FSIs investigated effects of dopamine depletion (Damodaran et al 2015)
211. Structure-dynamics relationships in bursting neuronal networks revealed (Mäki-Marttunen et al. 2013)
212. Studies of stimulus parameters for seizure disruption using NN simulations (Anderson et al. 2007)
213. Study of augmented Rubin and Terman 2004 deep brain stim. model in Parkinsons (Pascual et al. 2006)
214. Synaptic gating at axonal branches, and sharp-wave ripples with replay (Vladimirov et al. 2013)
215. Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010)
216. Synaptic plasticity can produce and enhance direction selectivity (Carver et al, 2008)
217. Synchronization by D4 dopamine receptor-mediated phospholipid methylation (Kuznetsova, Deth 2008)
218. Synchrony by synapse location (McTavish et al. 2012)
219. Temporal integration by stochastic recurrent network (Okamoto et al. 2007)
220. Thalamic quiescence of spike and wave seizures (Lytton et al 1997)
221. Thalamic Reticular Network (Destexhe et al 1994)
222. Thalamocortical and Thalamic Reticular Network (Destexhe et al 1996)
223. Thalamocortical augmenting response (Bazhenov et al 1998)
224. The activity phase of postsynaptic neurons (Bose et al 2004)
225. The neocortical microcircuit collaboration portal (Markram et al. 2015)
226. Towards a virtual C. elegans (Palyanov et al. 2012)
227. Turtle visual cortex model (Nenadic et al. 2003, Wang et al. 2005, Wang et al. 2006)
228. Two-cell inhibitory network bursting dynamics captured in a one-dimensional map (Matveev et al 2007)
229. Updated Tritonia Swim CPG (Calin-Jagemann et al. 2007)
230. Vertical System (VS) tangential cells network model (Trousdale et al. 2014)

Re-display model names with descriptions