Advanced search
User account
Login
Register
Find models by
Model name
First author
Each author
Find models for
Brain region
Concept
Find models of
Realistic Microcircuits
Connectionist Networks
A network model of the vertebrate retina (Publio et al. 2009)
Download zip file
Auto-launch
Help downloading and running models
Model Information
Model File
Model Views
Simulation Platform
Versions
Accession:
124063
In this work, we use a minimal conductance-based model of the ON rod pathways in the vertebrate retina to study the effects of electrical synaptic coupling via gap junctions among rods and among AII amacrine cells on the dynamic range of the retina. The model is also used to study the effects of the maximum conductance of rod hyperpolarization activated current Ih on the dynamic range of the retina, allowing a study of the interrelations between this intrinsic membrane parameter with those two retina connectivity characteristics.
Reference:
1 .
Publio R, Oliveira RF, Roque AC (2009) A computational study on the role of gap junctions and rod Ih conductance in the enhancement of the dynamic range of the retina.
PLoS One
4
:e6970
[
PubMed
]
Citations
Citation Browser
Model Information
(Click on a link to find other models with that property)
Model Type:
Realistic Network;
Brain Region(s)/Organism:
Cell Type(s):
Retina ganglion GLU cell;
Retina photoreceptor cone GLU cell;
Retina bipolar GLU cell;
Channel(s):
Gap Junctions:
Gap junctions;
Receptor(s):
Gene(s):
Transmitter(s):
Glutamate;
Simulation Environment:
NEURON;
Model Concept(s):
Sensory processing;
Implementer(s):
Publio, Rodrigo [publio at oist.jp];
Search NeuronDB
for information about:
Retina ganglion GLU cell
;
Retina photoreceptor cone GLU cell
;
Retina bipolar GLU cell
;
Glutamate
;
Download the displayed file
/
PublioEtAl2009
README.html
A2hh_k.mod
A2hh_na.mod
Bip_Ca.mod
Bip_Cad.mod
Bip_ih.mod
Bip_Ka.mod
Bip_Kv.mod
Cone_CPR.mod
Cone_ih.mod
Cone_Kv.mod
Ganglion_hh.mod
*
Other models using Ganglion_hh.mod:
Ribbon Synapse (Sikora et al 2005)
Salamander retinal ganglian cells: morphology influences firing (Sheasby, Fohlmeister 1999)
Salamander retinal ganglion cell: ion channels (Fohlmeister, Miller 1997)
gap.mod
IinjLT.mod
IinjLT_cone.mod
IinjLTDim.mod
*
Other models using IinjLTDim.mod:
Simulated light response in rod photoreceptors (Liu and Kourennyi 2004)
Rod_Ca.mod
Rod_Cad.mod
Rod_Clca.mod
Rod_ih.mod
Rod_Kca.mod
Rod_Kv.mod
Rod_Kx.mod
Rod_leak.mod
syn_bip_gan.mod
syn_rod_bip.mod
A2.tem
Bip.tem
Cone.tem
createcells.hoc
Ganglion.tem
gap.hoc
*
Other models using gap.hoc:
CA1 oriens alveus interneurons: signaling properties (Minneci et al. 2007)
Olfactory bulb mitral cell: synchronization by gap junctions (Migliore et al 2005)
init.hoc
mosinit.hoc
*
Other models using mosinit.hoc:
Availability of low-threshold Ca2+ current in retinal ganglion cells (Lee SC et al. 2003)
CA1 pyramidal neuron (Combe et al 2018)
CA1 pyramidal neurons: effect of external electric field from power lines (Cavarretta et al. 2014)
Changes of ionic concentrations during seizure transitions (Gentiletti et al. 2016)
Cortical network model of posttraumatic epileptogenesis (Bush et al 1999)
DBS of a multi-compartment model of subthalamic nucleus projection neurons (Miocinovic et al. 2006)
Effects of synaptic location and timing on synaptic integration (Rall 1964)
Extracellular fields for a three-dimensional network of cells using NEURON (Appukuttan et al 2017)
Feedforward heteroassociative network with HH dynamics (Lytton 1998)
Hippocampal basket cell gap junction network dynamics (Saraga et al. 2006)
Hodgkin-Huxley model of persistent activity in prefrontal cortex neurons (Winograd et al. 2008)
Model of repetitive firing in Grueneberg ganglion olfactory neurons (Liu et al., 2012)
NN activity impact on neocortical pyr. neurons integrative properties in vivo (Destexhe & Pare 1999)
Olfactory bulb mitral cell gap junction NN model: burst firing and synchrony (O`Connor et al. 2012)
Optimal balance predicts/explains amplitude and decay time of iPSGs (Kim & Fiorillo 2017)
Simulated light response in rod photoreceptors (Liu and Kourennyi 2004)
Space clamp problems in neurons with voltage-gated conductances (Bar-Yehuda and Korngreen 2008)
Spike propagation in dendrites with stochastic ion channels (Diba et al. 2006)
Striatal Output Neuron (Mahon, Deniau, Charpier, Delord 2000)
Sympathetic Preganglionic Neurone (Briant et al. 2014)
Synaptic integration by MEC neurons (Justus et al. 2017)
The cannula artifact (Chandler & Hodgkin 1965)
Vertical system (VS) fly cells with biophysics (Dan et al 2018)
netconnection.hoc
parameters.hoc
Rod.tem
screenshot1.jpg
screenshot2.jpg
session.ses
load_file("nrngui.hoc") load_file("init.hoc")
Load Model View