Current Dipole in Laminar Neocortex (Lee et al. 2013)

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Accession:151685
Laminar neocortical model in NEURON/Python, adapted from Jones et al 2009. https://bitbucket.org/jonescompneurolab/corticaldipole
Reference:
1 . Lee S, Jones SR (2013) Distinguishing mechanisms of gamma frequency oscillations in human current source signals using a computational model of a laminar neocortical network. Front Hum Neurosci 7:869 [PubMed]
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Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network;
Brain Region(s)/Organism: Neocortex;
Cell Type(s):
Channel(s): I Na,t; I K; I M; I Calcium; I h; I T low threshold; I K,Ca;
Gap Junctions:
Receptor(s): GabaA; GabaB; AMPA; NMDA;
Gene(s):
Transmitter(s):
Simulation Environment: NEURON (web link to model); Python (web link to model); NEURON; Python;
Model Concept(s): Magnetoencephalography; Temporal Pattern Generation; Activity Patterns; Gamma oscillations; Oscillations; Current Dipole; Touch;
Implementer(s): Lee, Shane [shane_lee at brown.edu];
Search NeuronDB for information about:  GabaA; GabaB; AMPA; NMDA; I Na,t; I T low threshold; I K; I M; I h; I K,Ca; I Calcium;
# expected run time < 125 s with 4 cores
# numbers of cells making up the pyramidal grids
N_pyr_x: 10
N_pyr_y: 10

# Numerics
tstop: 550.

# L2: pois inputs
L2Pyr_Pois_A_weight: 8e-4
L2Pyr_Pois_lamtha: 140.

# L5: pois inputs
L5Pyr_Pois_A_weight: 7.5e-3
L5Pyr_Pois_lamtha: 40.

# L2: weak ping
gbar_L2Pyr_L2Basket: 1.2e-3
gbar_L2Basket_L2Basket: 1e-2
gbar_L2Basket_L2Pyr_gabaa: 7e-3

# L5: weak ping
gbar_L5Pyr_L5Basket: 9.1e-4
gbar_L5Basket_L5Basket: 7.5e-3
gbar_L5Basket_L5Pyr_gabaa: 8e-2