/* Use run.hoc to start simulation. Creates a raster plot similar to Figure 2C in "Variability in respiratory rhythm generation: in vitro and in silico models", C Fietkiewicz, GO Shafer, EA Platt, CG Wilson, Communications in Nonlinear Science and Numerical Simulation, Volume 32, March 2016, Pages 158–168 (doi: 10.1016/j.cnsns.2015.08.018).
NOTE: To get more bursts, increase the simulation time.
Author contact: chris.fietkiewicz@case.edu
Author website: http://filer.case.edu/cxf47
*/
//Initializes the parameters necessary for main.hoc to run
proc initialize() {
strdef fileSuffix
setStop = $1
fileSuffix = $s2
outputMode = $3
seed = $4
tonicToPMweight = $5
tonicToPMprob = $6
PMtoPMweight = $7
PMtoPMprob = $8
tonicNoise = $9
tonicToPMrange = $10
PMtoPMrange = $11
tonicSeed = $12
tonicPeriodrange = $13
numTonic = $14
numPM = $15
tonicPeriodMean = $16
setEK = $17
setEleak = $18
} |