The original, 2-compartment, CA3 cell, Pinsky-Rinzel model (Pinsky, Rinzel 1994) has several discontinuous functions that prevent the use of standard bifurcation analysis tools to study the model. Here we present a modified, fully continuous system that captures the behaviour of the original model, while permitting the use of available numerical continuation software to perform full-system bifurcation and fast-slow analysis in XPPAUT.
Reference:
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Atherton LA, Prince LY, Tsaneva-Atanasova K (2016) Bifurcation analysis of a two-compartment hippocampal pyramidal cell model. J Comput Neurosci 41:91-106 [PubMed]
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