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Reconstructing cerebellar granule layer evoked LFP using convolution (ReConv) (Diwakar et al. 2011)
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Accession:
139883
The model allows reconstruction of evoked local field potentials as seen in the cerebellar granular layer. The approach uses a detailed model of cerebellar granule neuron to generate data traces and then uses a "ReConv" or jittered repetitive convolution technique to reproduce post-synaptic local field potentials in the granular layer. The algorithm was used to generate both in vitro and in vivo evoked LFP and reflected the changes seen during LTP and LTD, when such changes were induced in the underlying neurons by modulating release probability of synapses and sodium channel regulated intrinsic excitability of the cells.
Reference:
1 .
Diwakar S, Lombardo P, Solinas S, Naldi G, D'Angelo E (2011) Local field potential modeling predicts dense activation in cerebellar granule cells clusters under LTP and LTD control.
PLoS One
6
:e21928
[
PubMed
]
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Model Information
(Click on a link to find other models with that property)
Model Type:
Neuron or other electrically excitable cell;
Extracellular;
Brain Region(s)/Organism:
Cell Type(s):
Cerebellum interneuron granule GLU cell;
Channel(s):
I K;
I M;
I K,Ca;
I Sodium;
I Calcium;
I Cl, leak;
Gap Junctions:
Receptor(s):
GabaA;
AMPA;
NMDA;
Gene(s):
Transmitter(s):
Simulation Environment:
NEURON;
MATLAB;
Octave;
Model Concept(s):
Extracellular Fields;
Evoked LFP;
Implementer(s):
Diwakar, Shyam [shyam at amrita.edu];
Search NeuronDB
for information about:
Cerebellum interneuron granule GLU cell
;
GabaA
;
AMPA
;
NMDA
;
I K
;
I M
;
I K,Ca
;
I Sodium
;
I Calcium
;
I Cl, leak
;
/
ReConv
data
readme.html
AmpaCOD.mod
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Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_CA.mod
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Cerebellar Golgi cells, dendritic processing, and synaptic plasticity (Masoli et al 2020)
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Cerebellar granule cell (Masoli et al 2020)
Cerebellar granule cell (Masoli et al 2020)
Cerebellar granule cell (Masoli et al 2020)
Cerebellar granule cell (Masoli et al 2020)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_CALC.mod
*
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Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_GABA.mod
*
Other models using GRC_GABA.mod:
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_KA.mod
*
Other models using GRC_KA.mod:
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_KCA.mod
*
Other models using GRC_KCA.mod:
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_KIR.mod
*
Other models using GRC_KIR.mod:
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_KM.mod
*
Other models using GRC_KM.mod:
Cerebellar Golgi cells, dendritic processing, and synaptic plasticity (Masoli et al 2020)
Cerebellar Golgi cells, dendritic processing, and synaptic plasticity (Masoli et al 2020)
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellar granule cell (Masoli et al 2020)
Cerebellar granule cell (Masoli et al 2020)
Cerebellar granule cell (Masoli et al 2020)
Cerebellar granule cell (Masoli et al 2020)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_KV.mod
*
Other models using GRC_KV.mod:
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_LKG1.mod
*
Other models using GRC_LKG1.mod:
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_LKG2.mod
*
Other models using GRC_LKG2.mod:
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
GRC_NA.mod
*
Other models using GRC_NA.mod:
Cerebellar cortex oscil. robustness from Golgi cell gap jncs (Simoes de Souza and De Schutter 2011)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
NmdaS.mod
*
Other models using NmdaS.mod:
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
Pregen.mod
*
Other models using Pregen.mod:
Cerebellum granule cell FHF (Dover et al. 2016)
Multicompartmental cerebellar granule cell model (Diwakar et al. 2009)
ComPanel.hoc
Grc_Cell.hoc
mosinit.hoc
Parametri.hoc
ReConv_GrC.jpg
ReConv_invitro.jpg
ReConv_invivo.jpg
Record_vext.hoc
Start.hoc
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