Synchrony by synapse location (McTavish et al. 2012)

 Download zip file   Auto-launch 
Help downloading and running models
Accession:144054
This model considers synchrony between mitral cells induced via shared granule cell interneurons while taking into account the spatial constraints of the system. In particular, since inhibitory inputs decay passively along the lateral dendrites, this model demonstrates that an optimal arrangement of the inhibitory synapses will be near the cell bodies of the relevant mitral cells.
Reference:
1 . McTavish TS, Migliore M, Shepherd GM, Hines ML (2012) Mitral cell spike synchrony modulated by dendrodendritic synapse location. Front Comput Neurosci 6:3 [PubMed]
Citations  Citation Browser
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network; Neuron or other electrically excitable cell;
Brain Region(s)/Organism: Olfactory bulb;
Cell Type(s): Olfactory bulb main mitral GLU cell; Olfactory bulb main interneuron granule MC GABA cell;
Channel(s): I Na,t; I A; I K;
Gap Junctions:
Receptor(s): GabaB; AMPA; NMDA;
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Synchronization; Olfaction;
Implementer(s): McTavish, Thomas S [thomas.mctavish at yale.edu];
Search NeuronDB for information about:  Olfactory bulb main mitral GLU cell; Olfactory bulb main interneuron granule MC GABA cell; GabaB; AMPA; NMDA; I Na,t; I A; I K; 
0	0.25
0	14.15
0	10.03
0	8.29
0	11.02
0	13.94
0	12.63
0	0.55
0	3.59
0	3.08
0	9.96
0	14.25
0	3.67
0	1.02
0	4.03
0	13.44
0	10.11
0	0.17
0	10.54
0	5.75
0	6.75
0	14.66
0	4.57
0	12.10
0	7.22
0	4.82
0	13.42
0	9.16
0	2.52
0	9.44
0	4.59
0	13.24
0	9.33
0	2.33
0	10.17
0	8.01
0	11.55
0	3.01
0	2.52
0	2.01
0	13.99
0	13.58
0	7.89
0	10.68
0	11.51
0	14.71
0	0.52
0	10.75
0	1.38
0	8.66
0	6.17
0	0.02
0	3.65
0	0.21
0	9.87
0	0.47
0	0.91
0	3.29
0	11.96
0	3.44
0	3.90
0	12.24
0	1.41
0	7.98
0	13.74
0	13.28
0	10.17
0	2.96
0	2.90
0	11.11
0	13.78
0	1.70
0	4.26
0	13.42
0	7.37
0	3.24
0	12.42
0	2.72
0	8.40
0	14.51
0	6.54
0	5.08
0	9.76
0	12.38
0	10.32
0	1.58
0	2.70
0	14.35
0	2.69
0	14.74
0	5.37
0	14.24
0	3.78
0	8.09
0	7.96
0	5.85
0	9.86
0	9.67
0	1.70
0	10.35
0	9.55
0	12.35
0	7.24
0	11.75
0	14.52
0	11.77
0	5.35
0	8.31
0	14.61
0	13.80
0	10.03
0	8.13
0	3.39
0	3.39
0	13.09
0	6.60
0	9.80
0	13.58
0	1.26
0	12.39
0	8.40
1	14.15
1	10.03
1	8.29
1	11.02
1	13.94
1	12.63
1	0.55
1	3.59
1	3.08
1	9.96
1	14.25
1	3.67
1	1.02
1	4.03
1	13.44
1	10.11
1	0.17
1	10.54
1	5.75
1	6.75
1	14.66
1	4.57
1	12.10
1	7.22
1	4.82
1	13.42
1	9.16
1	2.52
1	9.44
1	4.59
1	13.24
1	9.33
1	2.33
1	10.17
1	8.01
1	11.55
1	3.01
1	2.52
1	2.01
1	13.99
1	13.58
1	7.89
1	10.68
1	11.51
1	14.71
1	0.52
1	10.75
1	1.38
1	8.66
1	6.17
1	0.02
1	3.65
1	0.21
1	9.87
1	0.47
1	0.91
1	3.29
1	11.96
1	3.44
1	3.90
1	12.24
1	1.41
1	7.98
1	13.74
1	13.28
1	10.17
1	2.96
1	2.90
1	11.11
1	13.78
1	1.70
1	4.26
1	13.42
1	7.37
1	3.24
1	12.42
1	2.72
1	8.40
1	14.51
1	6.54
1	5.08
1	9.76
1	12.38
1	10.32
1	1.58
1	2.70
1	14.35
1	2.69
1	14.74
1	5.37
1	14.24
1	3.78
1	8.09
1	7.96
1	5.85
1	9.86
1	9.67
1	1.70
1	10.35
1	9.55
1	12.35
1	7.24
1	11.75
1	14.52
1	11.77
1	5.35
1	8.31
1	14.61
1	13.80
1	10.03
1	8.13
1	3.39
1	3.39
1	13.09
1	6.60
1	9.80
1	13.58
1	1.26
1	12.39
1	8.40
1	7.71
2	10.03
2	8.29
2	11.02
2	13.94
2	12.63
2	0.55
2	3.59
2	3.08
2	9.96
2	14.25
2	3.67
2	1.02
2	4.03
2	13.44
2	10.11
2	0.17
2	10.54
2	5.75
2	6.75
2	14.66
2	4.57
2	12.10
2	7.22
2	4.82
2	13.42
2	9.16
2	2.52
2	9.44
2	4.59
2	13.24
2	9.33
2	2.33
2	10.17
2	8.01
2	11.55
2	3.01
2	2.52
2	2.01
2	13.99
2	13.58
2	7.89
2	10.68
2	11.51
2	14.71
2	0.52
2	10.75
2	1.38
2	8.66
2	6.17
2	0.02
2	3.65
2	0.21
2	9.87
2	0.47
2	0.91
2	3.29
2	11.96
2	3.44
2	3.90
2	12.24
2	1.41
2	7.98
2	13.74
2	13.28
2	10.17
2	2.96
2	2.90
2	11.11
2	13.78
2	1.70
2	4.26
2	13.42
2	7.37
2	3.24
2	12.42
2	2.72
2	8.40
2	14.51
2	6.54
2	5.08
2	9.76
2	12.38
2	10.32
2	1.58
2	2.70
2	14.35
2	2.69
2	14.74
2	5.37
2	14.24
2	3.78
2	8.09
2	7.96
2	5.85
2	9.86
2	9.67
2	1.70
2	10.35
2	9.55
2	12.35
2	7.24
2	11.75
2	14.52
2	11.77
2	5.35
2	8.31
2	14.61
2	13.80
2	10.03
2	8.13
2	3.39
2	3.39
2	13.09
2	6.60
2	9.80
2	13.58
2	1.26
2	12.39
2	8.40
2	7.71
2	14.21
3	8.29
3	11.02
3	13.94
3	12.63
3	0.55
3	3.59
3	3.08
3	9.96
3	14.25
3	3.67
3	1.02
3	4.03
3	13.44
3	10.11
3	0.17
3	10.54
3	5.75
3	6.75
3	14.66
3	4.57
3	12.10
3	7.22
3	4.82
3	13.42
3	9.16
3	2.52
3	9.44
3	4.59
3	13.24
3	9.33
3	2.33
3	10.17
3	8.01
3	11.55
3	3.01
3	2.52
3	2.01
3	13.99
3	13.58
3	7.89
3	10.68
3	11.51
3	14.71
3	0.52
3	10.75
3	1.38
3	8.66
3	6.17
3	0.02
3	3.65
3	0.21
3	9.87
3	0.47
3	0.91
3	3.29
3	11.96
3	3.44
3	3.90
3	12.24
3	1.41
3	7.98
3	13.74
3	13.28
3	10.17
3	2.96
3	2.90
3	11.11
3	13.78
3	1.70
3	4.26
3	13.42
3	7.37
3	3.24
3	12.42
3	2.72
3	8.40
3	14.51
3	6.54
3	5.08
3	9.76
3	12.38
3	10.32
3	1.58
3	2.70
3	14.35
3	2.69
3	14.74
3	5.37
3	14.24
3	3.78
3	8.09
3	7.96
3	5.85
3	9.86
3	9.67
3	1.70
3	10.35
3	9.55
3	12.35
3	7.24
3	11.75
3	14.52
3	11.77
3	5.35
3	8.31
3	14.61
3	13.80
3	10.03
3	8.13
3	3.39
3	3.39
3	13.09
3	6.60
3	9.80
3	13.58
3	1.26
3	12.39
3	8.40
3	7.71
3	14.21
3	9.78
4	11.02
4	13.94
4	12.63
4	0.55
4	3.59
4	3.08
4	9.96
4	14.25
4	3.67
4	1.02
4	4.03
4	13.44
4	10.11
4	0.17
4	10.54
4	5.75
4	6.75
4	14.66
4	4.57
4	12.10
4	7.22
4	4.82
4	13.42
4	9.16
4	2.52
4	9.44
4	4.59
4	13.24
4	9.33
4	2.33
4	10.17
4	8.01
4	11.55
4	3.01
4	2.52
4	2.01
4	13.99
4	13.58
4	7.89
4	10.68
4	11.51
4	14.71
4	0.52
4	10.75
4	1.38
4	8.66
4	6.17
4	0.02
4	3.65
4	0.21
4	9.87
4	0.47
4	0.91
4	3.29
4	11.96
4	3.44
4	3.90
4	12.24
4	1.41
4	7.98
4	13.74
4	13.28
4	10.17
4	2.96
4	2.90
4	11.11
4	13.78
4	1.70
4	4.26
4	13.42
4	7.37
4	3.24
4	12.42
4	2.72
4	8.40
4	14.51
4	6.54
4	5.08
4	9.76
4	12.38
4	10.32
4	1.58
4	2.70
4	14.35
4	2.69
4	14.74
4	5.37
4	14.24
4	3.78
4	8.09
4	7.96
4	5.85
4	9.86
4	9.67
4	1.70
4	10.35
4	9.55
4	12.35
4	7.24
4	11.75
4	14.52
4	11.77
4	5.35
4	8.31
4	14.61
4	13.80
4	10.03
4	8.13
4	3.39
4	3.39
4	13.09
4	6.60
4	9.80
4	13.58
4	1.26
4	12.39
4	8.40
4	7.71
4	14.21
4	9.78
4	11.92