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Multiscale simulation of the striatal medium spiny neuron (Mattioni & Le Novere 2013)
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Model Information
Model File
Accession:
150284
"… We present a new event-driven algorithm to synchronize different neuronal models, which decreases computational time and avoids superfluous synchronizations. The algorithm is implemented in the TimeScales framework. We demonstrate its use by simulating a new multiscale model of the Medium Spiny Neuron of the Neostriatum. The model comprises over a thousand dendritic spines, where the electrical model interacts with the respective instances of a biochemical model. Our results show that a multiscale model is able to exhibit changes of synaptic plasticity as a result of the interaction between electrical and biochemical signaling. …"
Reference:
1 .
Mattioni M, Le Novère N (2013) Integration of biochemical and electrical signaling-multiscale model of the medium spiny neuron of the striatum.
PLoS One
8
:e66811
[
PubMed
]
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Model Information
(Click on a link to find other models with that property)
Model Type:
Neuron or other electrically excitable cell;
Synapse;
Brain Region(s)/Organism:
Striatum;
Cell Type(s):
Neostriatum medium spiny direct pathway GABA cell;
Channel(s):
I Na,p;
I Na,t;
I T low threshold;
I A;
I K,Ca;
I CAN;
I Calcium;
I A, slow;
I Krp;
I R;
I Q;
Gap Junctions:
Receptor(s):
Gene(s):
Kv4.2 KCND2;
Kv1.2 KCNA2;
Cav1.3 CACNA1D;
Cav1.2 CACNA1C;
Kv2.1 KCNB1;
Transmitter(s):
Simulation Environment:
NEURON;
Python;
Model Concept(s):
Synaptic Plasticity;
Signaling pathways;
Calcium dynamics;
Multiscale;
Implementer(s):
Mattioni, Michele [mattioni at ebi.ac.uk];
Search NeuronDB
for information about:
Neostriatum medium spiny direct pathway GABA cell
;
I Na,p
;
I Na,t
;
I T low threshold
;
I A
;
I K,Ca
;
I CAN
;
I Calcium
;
I A, slow
;
I Krp
;
I R
;
I Q
;
/
TimeScales-master
hoc
tau_tables
all_tau_vecs.hoc
baseline_values.txt
*
Other models using baseline_values.txt:
Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005)
basic_procs.hoc
create_mspcells.hoc
*
Other models using create_mspcells.hoc:
Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005)
Calcium response prediction in the striatal spines depending on input timing (Nakano et al. 2013)
current_clamp.ses
*
Other models using current_clamp.ses:
Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005)
iclamp_0.248.ses
iclamp_0.248_fixedTimeStep.ses
mosinit.hoc
*
Other models using mosinit.hoc:
Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005)
msp_template.hoc
nacb_main.hoc
runControl_somaVoltage.ses
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