objref frec
strdef cmd, dircmd, direx, comper, version, vercomment, vercomment2, mypath, userstr, machname, machnick, outfile, edate, comver
strdef verleft, verright
objref strobj
strobj = new StringFunctions()
proc typeout() {local i, myline, rn, rank, gid, srcid localobj tgt, f, cell, f2c // Write out the cell types & gid ranges
if (pc.id == 0) { // Write header to file 1 time only
rn = -1
sprint(dircmd, "ls ../results/%s", RunName)
{system(dircmd, direx)}
{sprint(comper, "ls: cannot access ../results/%s: No such file or directory", RunName)}
while (strcmp(direx,comper)!=0 && strcmp(direx,"")!=0 ) {
rn = rn + 1
sprint(dircmd, "ls ../results/%s_%02.0f", RunName, rn)
{system(dircmd, direx)}
{sprint(comper, "ls: cannot access ../results/%s_%02.0f: No such file or directory", RunName, rn)}
}
if (rn>-1) {
sprint(RunName, "%s_%02.0f", RunName, rn)
}
printf(" so I will create it now\n")
sprint(dircmd, "mkdir ../results/%s", RunName)
{system(dircmd, direx)}
//sprint(dircmd, "cp ../setupfiles/lowindex.hoc ../results/%s", RunName)
//{system(dircmd, direx)}
//sprint(dircmd, "cp ../stimulation/sintrainparams.hoc ../results/%s", RunName)
//{system(dircmd, direx)}
//sprint(dircmd, "cp ../cells/allsyns.dat ../results/%s", RunName)
//{system(dircmd, direx)}
// check for hg
sprint(dircmd, "hg parent --template '{rev}: {desc}\n'")
{system(dircmd, direx)}
// check string for "no hg in"
index = strobj.len(direx)
// if the check matches, then use backup files
if (index<1) {
sprint(dircmd, "cp ../hg_status.out ../results/%s/hg_status.out", RunName)
{system(dircmd, direx)}
sprint(dircmd, "cp ../hg_diff.out ../results/%s/hg_diff.out", RunName)
{system(dircmd, direx)}
f2c = new File()
f2c.ropen("../vercomment.txt") // Open the celltype
myline=f2c.gets(vercomment)
strobj.left(vercomment, myline-1)
f2c.close
f2c.ropen("../version.txt") // Open the celltype
f2c.scanstr(version)
f2c.close
} else { // else use built in hg
sprint(dircmd, "hg status")
{system(dircmd, direx)}
if (strcmp(direx,"")>0) {
comver = "Yes"
sprint(dircmd, "hg status > ../results/%s/hg_status.out", RunName)
{system(dircmd, direx)}
sprint(dircmd, "hg diff > ../results/%s/hg_diff.out", RunName)
{system(dircmd, direx)}
} else {
comver = "No"
}
sprint(dircmd, "hg parent --template '{rev}: {desc}\n'")
{system(dircmd, direx)}
if (strobj.len(direx)<2) {
vercomment="unknown"
} else {
strobj.left(direx, strobj.len(direx)-1) // hg parent rev/desc
vercomment=direx
}
i = strobj.substr(vercomment, "'")
while (i>0) {
verleft = vercomment
strobj.left(verleft, i)
verright = vercomment
strobj.right(verright, i+1)
sprint(vercomment,"%s''%s", verleft, verright)
i = strobj.substr(verright, "'")
if (i>0) {
i = i + strobj.len(verleft)+2
}
}
sprint(dircmd, "hg parent --template '{node}\n'")
{system(dircmd, direx)}
if (strobj.len(direx)<2) {
version="unknown"
} else {
strobj.left(direx, strobj.len(direx)-1) // hg parent node
version=direx
}
}
system("cd ..;pwd",mypath)
if (strobj.len(mypath)<2) {
mypath="unknown"
} else {
strobj.left(mypath, strobj.len(mypath)-1) // path
}
system("whoami", userstr)
if (strobj.len(userstr)<2) {
userstr="unknown"
} else {
strobj.left(userstr, strobj.len(userstr)-1) // whoami
}
{system("hostname", machname)}
if (strobj.len(machname)<2) {
machname="unknown"
} else {
strobj.left(machname, strobj.len(machname)-1) // hostname
}
machnick = machname// nickname for host machine, usually second term in address
i = strobj.substr(machnick, ".")
if (i>0) {
strobj.right(machnick, i+1)
i = strobj.substr(machnick, ".")
if (i>0) {
strobj.left(machnick, i)
}
}
{system("date \"+%d-%b-%Y %H:%M:%S\"", edate)}
if (strobj.len(edate)<2) {
edate="unknown"
} else {
strobj.left(edate, strobj.len(edate)-1) // date
}
sprint(outfile, "../results/%s/runreceipt.txt", RunName)
frec = new File(outfile)
frec.wopen()
frec.printf("NumProcessors = %g;\n", pc.nhost)
frec.printf("ExecutionDate = '%s';\n", edate)
frec.printf("ExecutedBy = '%s';\n", userstr)
if (strcmp(machnick,"local")!=0) {
frec.printf("Machine = '%s';\n", machnick)
}
frec.printf("MachineFull = '%s';\n", machname)
frec.printf("ModelVerComment='%s';\n", vercomment)
frec.printf("ModelVersion='%s';\n", version)
frec.printf("ModelDirectory ='%s';\n", mypath)
frec.printf("NEURONVersion ='%s';\n", nrnversion(2)) // version number and mercurial changeset
frec.printf("WorkDirChg ='%s';\n", comver) // whether this job was run using a model working directory that
// had been changed since the last version update
// If no, the run can therefore be easily reproduced(No)
// If yes, we won't have any record of the changes and that
// will limit our ability to reproduce the run unless
// we record the changes, which we do in that case (Yes)
printmyvars()
frec.close()
}
pc.barrier() // Wait for all ranks to get to this point
sprint(cmd,"../results/%s/celltype.dat", RunName)
f = new File(cmd)
if (pc.id == 0) { // Write header to file 1 time only
f.wopen()
f.printf("celltype\ttypeIndex\trangeStart\trangeEnd\n")
for i=0, numCellTypes-1 {
f.printf("%s\t%s\t%d\t%d\t%d\n", cellType[i].cellType_string, cellType[i].technicalType, i, cellType[i].cellStartGid, cellType[i].cellEndGid)
}
f.close()
}
}
/**/strdef thisline, getval, result, paramstr, testline, valstr
/**/proc printmyvars() {local strlen localobj pfobj
pfobj = new File()
pfobj.ropen("../setupfiles/parameters.hoc")
while (pfobj.gets(thisline)>-1) {
testline=thisline
strobj.left(testline, 1) // testline
if (strcmp(testline,"d")==0) {
result=thisline
strobj.right(result, 13)
strlen = strobj.head(result, "\",", paramstr)
{sprint(getval, "printnow(%s, paramstr, %g)", paramstr, strobj.len(paramstr))}
{execute1(getval)}
}
}
pfobj.close
}
/**/proc printnow() {
if (argtype(1)==0) {
if ($3>0) {
//sprint(getval, "paramval = %s", $s2) // Note that paramval cannot be a local variable
//{execute1(getval)}
{frec.printf("%s = %g;\n", paramstr, $1)}
}
} else {
if (argtype(1)==2) {
if ($3>0) {
//sprint(getval, "paramval = %s", $s2) // Note that paramval cannot be a local variable
//{execute1(getval)}
{frec.printf("%s = '%s';\n", paramstr, $s1)}
}
}
}
}
typeout()
{pc.broadcast(RunName, 0)}
