<?xml version="1.0" encoding="UTF-8"?>
<neuroml xmlns="http://morphml.org/neuroml/schema" xmlns:meta="http://morphml.org/metadata/schema" xmlns:mml="http://morphml.org/morphml/schema" xmlns:bio="http://morphml.org/biophysics/schema" xmlns:cml="http://morphml.org/channelml/schema" xmlns:net="http://morphml.org/networkml/schema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://morphml.org/neuroml/schema NeuroML.xsd" lengthUnits="micron">
<cells>
<cell name="SampleCell">
<meta:notes>A Simple cell for testing purposes</meta:notes>
<mml:segments>
<mml:segment id="0" name="Soma" cable="0">
<mml:proximal x="0.0" y="0.0" z="0.0" diameter="16.0"/>
<mml:distal x="0.0" y="0.0" z="0.0" diameter="16.0"/>
</mml:segment>
<mml:segment id="1" name="mainDend" parent="0" cable="1">
<mml:proximal x="0.0" y="0.0" z="0.0" diameter="2.0"/>
<mml:distal x="20.0" y="0.0" z="0.0" diameter="2.0"/>
</mml:segment>
<mml:segment id="2" name="subDend1" parent="1" cable="2">
<mml:proximal x="20.0" y="0.0" z="0.0" diameter="2.0"/>
<mml:distal x="40.0" y="15.0" z="0.0" diameter="2.0"/>
</mml:segment>
<mml:segment id="3" name="subDend2" parent="1" cable="3">
<mml:proximal x="20.0" y="0.0" z="0.0" diameter="2.0"/>
<mml:distal x="45.0" y="0.0" z="0.0" diameter="2.0"/>
</mml:segment>
<mml:segment id="4" name="subDend3" parent="1" cable="4">
<mml:proximal x="20.0" y="0.0" z="0.0" diameter="2.0"/>
<mml:distal x="40.0" y="-15.0" z="0.0" diameter="2.0"/>
</mml:segment>
<mml:segment id="5" name="mainAxon" parent="0" cable="5">
<mml:proximal x="0.0" y="0.0" z="0.0" diameter="1.0"/>
<mml:distal x="-30.0" y="0.0" z="0.0" diameter="1.0"/>
</mml:segment>
</mml:segments>
<mml:cables>
<mml:cable id="0" name="Soma">
<meta:group>all</meta:group>
<meta:group>soma_group</meta:group>
</mml:cable>
<mml:cable id="1" name="mainDendSec" fract_along_parent="0.5">
<meta:group>all</meta:group>
<meta:group>dendrite_group</meta:group>
</mml:cable>
<mml:cable id="2" name="subDendSec1">
<meta:group>all</meta:group>
<meta:group>dendrite_group</meta:group>
</mml:cable>
<mml:cable id="3" name="subDendSec2">
<meta:group>all</meta:group>
<meta:group>dendrite_group</meta:group>
</mml:cable>
<mml:cable id="4" name="subDendSec3">
<meta:group>all</meta:group>
<meta:group>dendrite_group</meta:group>
</mml:cable>
<mml:cable id="5" name="mainAxonSec" fract_along_parent="0.5">
<meta:group>all</meta:group>
<meta:group>axon_group</meta:group>
</mml:cable>
</mml:cables>
<!--Adding the biophysical parameters-->
<biophysics units="Physiological Units">
<!--
<bio:mechanism name="NaConductance" type="Channel Mechanism">
<bio:parameter name="gmax" value="120.0">
<bio:group>all</bio:group>
</bio:parameter>
</bio:mechanism>
<bio:mechanism name="KConductance" type="Channel Mechanism">
<bio:parameter name="gmax" value="36.0">
<bio:group>all</bio:group>
</bio:parameter>
</bio:mechanism>
-->
<bio:mechanism name="pas" type="Channel Mechanism" passive_conductance="true">
<bio:parameter name="e" value="-54.3">
<bio:group>all</bio:group>
</bio:parameter>
<bio:parameter name="gmax" value="0.3">
<bio:group>all</bio:group>
</bio:parameter>
</bio:mechanism>
<bio:spec_capacitance>
<bio:parameter value="1.1">
<bio:group>all</bio:group>
</bio:parameter>
</bio:spec_capacitance>
<bio:spec_axial_resistance>
<bio:parameter value="0.03">
<bio:group>all</bio:group>
</bio:parameter>
</bio:spec_axial_resistance>
<bio:init_memb_potential>
<bio:parameter value="-65.0">
<bio:group>all</bio:group>
</bio:parameter>
</bio:init_memb_potential>
</biophysics>
<connectivity>
<net:potential_syn_loc synapse_type="DoubExpSyn">
<net:group>all</net:group>
</net:potential_syn_loc>
</connectivity>
</cell>
</cells></neuroml> |