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Application of a common kinetic formalism for synaptic models (Destexhe et al 1994)
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Accession:
18198
Application to AMPA, NMDA, GABAA, and GABAB receptors is given in a book chapter. The reference paper synthesizes a comprehensive general description of synaptic transmission with Markov kinetic models. This framework is applicable to modeling ion channels, synaptic release, and all receptors. Please see the references for more details. A simple introduction to this method is given in a seperate paper Destexhe et al Neural Comput 6:14-18 , 1994). More information and papers at http://cns.iaf.cnrs-gif.fr/Main.html and through email: Destexhe@iaf.cnrs-gif.fr
Reference:
1 .
Destexhe A, Mainen ZF, Sejnowski TJ (1994) Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism.
J Comput Neurosci
1
:195-230
[
PubMed
]
2 .
Destexhe A, Mainen Z, Sejnowski TJ (1994) An efficient method for computing synaptic conductances based on a kinetic model of receptor binding
Neural Comput
6
:14-18
3 .
Destexhe A, Mainen Z, Sejnowski T (1995) Fast Kinetic Models for Simulating AMPA, NMDA, GABAA and GABAB Receptors
The Neurobiology of Computation
, Bower J, ed. pp.9
Citations
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Model Information
(Click on a link to find other models with that property)
Model Type:
Synapse;
Electrogenic pump;
Brain Region(s)/Organism:
Cell Type(s):
Channel(s):
Gap Junctions:
Receptor(s):
Nicotinic;
M1;
M3;
M4;
M5;
M2;
mGluR1;
mGluR2;
mGluR3;
mGluR4;
mGluR5;
mGluR6;
mGluR7;
mGluR8;
Alpha;
Alpha1;
Alpha2;
Beta;
D1;
D2;
5-HT1;
5-HT2;
5-HT4;
H2;
GabaA;
GabaB;
Muscarinic;
AMPA;
NMDA;
mGluR;
5-HT3;
Kainate;
Monoamine Receptors;
Glutamate;
Gaba;
Adrenergic;
Serotonin;
Histamine;
Cholinergic Receptors;
Amino Acid Receptors;
Sensory Receptors;
Olfactory Receptors;
Opsins;
Dopaminergic Receptor;
Glycine;
Gaseous Receptors;
NO;
Peptide Receptors;
Dynorphin;
H1;
Ion Receptors;
Zn2+;
CO;
Gene(s):
Transmitter(s):
Acetylcholine;
Glycine;
Dopamine;
Zn2+;
NO;
CO;
Dynorphin;
Ephinephrine;
Norephinephrine;
Amino Acids;
Gaba;
Glutamate;
Monoamines;
Peptides;
Ions;
Gases;
Histamine;
Serotonin;
Simulation Environment:
NEURON;
Model Concept(s):
Ion Channel Kinetics;
Markov-type model;
Implementer(s):
Destexhe, Alain [Destexhe at iaf.cnrs-gif.fr];
Mainen, Zach [Mainen at cshl.edu];
Search NeuronDB
for information about:
Nicotinic
;
M1
;
M3
;
M4
;
M5
;
M2
;
mGluR1
;
mGluR2
;
mGluR3
;
mGluR4
;
mGluR5
;
mGluR6
;
mGluR7
;
mGluR8
;
Alpha
;
Alpha1
;
Alpha2
;
Beta
;
D1
;
D2
;
5-HT1
;
5-HT2
;
5-HT4
;
H2
;
GabaA
;
GabaB
;
Muscarinic
;
AMPA
;
NMDA
;
mGluR
;
5-HT3
;
Kainate
;
Monoamine Receptors
;
Glutamate
;
Gaba
;
Adrenergic
;
Serotonin
;
Histamine
;
Cholinergic Receptors
;
Amino Acid Receptors
;
Sensory Receptors
;
Olfactory Receptors
;
Opsins
;
Dopaminergic Receptor
;
Glycine
;
Gaseous Receptors
;
NO
;
Peptide Receptors
;
Dynorphin
;
H1
;
Ion Receptors
;
Zn2+
;
CO
;
Acetylcholine
;
Glycine
;
Dopamine
;
Zn2+
;
NO
;
CO
;
Dynorphin
;
Ephinephrine
;
Norephinephrine
;
Amino Acids
;
Gaba
;
Glutamate
;
Monoamines
;
Peptides
;
Ions
;
Gases
;
Histamine
;
Serotonin
;
/
SYN_NEW
README
ampa.mod
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gabaa.mod
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Kinetic synaptic models applicable to building networks (Destexhe et al 1998)
gabaa5.mod
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gabab.mod
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Other models using gabab.mod:
Kinetic synaptic models applicable to building networks (Destexhe et al 1998)
gabab3.mod
HH2.mod
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Other models using HH2.mod:
A model of optimal learning with redundant synaptic connections (Hiratani & Fukai 2018)
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Knox implementation of Destexhe 1998 spike and wave oscillation model (Knox et al 2018)
Thalamocortical and Thalamic Reticular Network (Destexhe et al 1996)
nmda.mod
*
Other models using nmda.mod:
Kinetic synaptic models applicable to building networks (Destexhe et al 1998)
nmda5.mod
*
Other models using nmda5.mod:
AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008)
Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007)
release.mod
ampa.hoc
ampa5.hoc
gabaa.hoc
gabaa5.hoc
gabab.hoc
gabab3.hoc
mosinit.hoc
*
Other models using mosinit.hoc:
Thalamic Reticular Network (Destexhe et al 1994)
nmda.hoc
nmda5.hoc
release.hoc
rundemo.hoc
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GABA_A - simple
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GABA_B - simple
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NMDA - simple
Synaptic Release