Interaction of leak and IMI conductance on the STG over broad temperature range (Stadele et al 2015)

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Accession:184404
The ZIP file contains a Hodgkin-Huxley based circuit model and the simulation environment MadSim used to study the interaction of leak and IMI on the gastric mill network of the crab (Cancer borealis) as represented in (C. Städele, S. Heigele and W. Stein, 2015) MadSim, the simulation environment used for this study, is freeware and included in the package.
Reference:
1 . Stein W, Straub O, Ausborn J, Mader W, Wolf H (2008) Motor pattern selection by combinatorial code of interneuronal pathways. J Comput Neurosci 25:543-61 [PubMed]
2 . Ausborn J, Stein W, Wolf H (2007) Frequency control of motor patterning by negative sensory feedback. J Neurosci 27:9319-28 [PubMed]
3 . Städele C, Heigele S, Stein W (2015) Neuromodulation to the Rescue: Compensation of Temperature-Induced Breakdown of Rhythmic Motor Patterns via Extrinsic Neuromodulatory Input. PLoS Biol 13:e1002265 [PubMed]
4 . Daur N, Diehl F, Mader W, Stein W (2012) The stomatogastric nervous system as a model for studying sensorimotor interactions in real-time closed-loop conditions. Front Comput Neurosci 6:13 [PubMed]
Citations  Citation Browser
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network;
Brain Region(s)/Organism: Stomatogastric ganglion;
Cell Type(s): Stomatogastric Ganglion (STG) Lateral Gastric (LG) cell;
Channel(s): I MI;
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s): CabTRP 1a;
Simulation Environment: MadSim;
Model Concept(s): Temporal Pattern Generation; Invertebrate; Neuromodulation;
Implementer(s):
Search NeuronDB for information about:  I MI; CabTRP 1a;
/
StaedeleEtAl2015
madSim 6.11
parameter
standard-kanaele
! bloss oinr.knl *
1 kanal.knl *
caK-Kanal.kca
dialog texte de.txt
dialog texte en.txt
form parameter.txt
form parameter.xls
GB.channel *
GB.channel.description *
GB.channel.description.doc *
gb-parameter.txt *
gb-parameter.xls *
HH.channel *
HH.channel.description *
HH.channel.description.doc *
ioTabelle langsam.txt *
ioTabelle normal.txt *
ioTabelle.txt *
izhikevich-typen.txt *
izhikevich-typen.txt.orig *
meldung texte de.txt
meldung texte en.txt
meldung texte en.txt.bak
neuronParameter.xls
ONOFF.channel *
ONOFF.channel.description *
ONOFF.channel.description.doc *
ONOFF.NEU *
reizFuerServerBetrieb kurz.txt *
reizFuerServerBetrieb original.txt *
reizFuerServerBetrieb.txt *
STANDARD.CA *
STANDARD.GEN *
STANDARD.K *
STANDARD.NA *
STANDARD.NEU *
STANDARD.ON *
standardap 2000ms.TXT *
standardap 200ms.txt *
standardap original.TXT *
standardap.txt *
swim example.txt *
SWIM.channel *
SWIM.channel.description *
SWIM.channel.description.doc *
tooltip texte de.txt
tooltip texte en.txt
tooltip texte en.txt.bak
userDef SWIM kanal original.txt *
                            
[izhikevich standardtypen] ***********************
izhikevich typ 0 a=0.01
izhikevich typ 0 b=0.1
izhikevich typ 0 c=-65
izhikevich typ 0 d=8
izhikevich typ 0 tau=0.2
izhikevich typ 0 V=-70
izhikevich typ 0 U=-22
izhikevich typ 0 naE=40
izhikevich typ 0 bezeichnung=standard
izhikevich typ 1 a=0.02
izhikevich typ 1 b=0.2
izhikevich typ 1 c=-65
izhikevich typ 1 d=6
izhikevich typ 1 tau=0.2
izhikevich typ 1 V=-70
izhikevich typ 1 U=-20
izhikevich typ 1 naE=30
izhikevich typ 1 bezeichnung=tonic spiking
izhikevich typ 2 a=0.02
izhikevich typ 2 b=0.25
izhikevich typ 2 c=-65
izhikevich typ 2 d=6
izhikevich typ 2 tau=0.2
izhikevich typ 2 V=-70
izhikevich typ 2 U=-12
izhikevich typ 2 naE=30
izhikevich typ 2 bezeichnung=phasic spiking
izhikevich typ 3 a=0.02
izhikevich typ 3 b=0.2
izhikevich typ 3 c=-50
izhikevich typ 3 d=2
izhikevich typ 3 tau=0.2
izhikevich typ 3 V=-70
izhikevich typ 3 U=-20
izhikevich typ 3 naE=30
izhikevich typ 3 bezeichnung=tonic bursting
izhikevich typ 4 a=0.02
izhikevich typ 4 b=0.25
izhikevich typ 4 c=-55
izhikevich typ 4 d=0.05
izhikevich typ 4 tau=0.2
izhikevich typ 4 V=-70
izhikevich typ 4 U=-20
izhikevich typ 4 naE=30
izhikevich typ 4 bezeichnung=phasic bursting
izhikevich typ 5 a=0.02
izhikevich typ 5 b=0.2
izhikevich typ 5 c=-55
izhikevich typ 5 d=4
izhikevich typ 5 tau=0.2
izhikevich typ 5 V=-70
izhikevich typ 5 U=-20
izhikevich typ 5 naE=30
izhikevich typ 5 bezeichnung=mixed mode xxx
izhikevich typ 6 a=0.01
izhikevich typ 6 b=0.2
izhikevich typ 6 c=-65
izhikevich typ 6 d=8
izhikevich typ 6 tau=0.2
izhikevich typ 6 V=-70
izhikevich typ 6 U=-20
izhikevich typ 6 naE=30
izhikevich typ 6 bezeichnung=spike frequency adaptation
izhikevich typ 7 a=0.02
izhikevich typ 7 b=-0.1
izhikevich typ 7 c=-55
izhikevich typ 7 d=6
izhikevich typ 7 tau=0.2
izhikevich typ 7 V=-70
izhikevich typ 7 U=-20
izhikevich typ 7 naE=30
izhikevich typ 7 bezeichnung=Class 1
izhikevich typ 8 a=0.2
izhikevich typ 8 b=0.26
izhikevich typ 8 c=-65
izhikevich typ 8 d=0
izhikevich typ 8 tau=0.2
izhikevich typ 8 V=-70
izhikevich typ 8 U=-20
izhikevich typ 8 naE=30
izhikevich typ 8 bezeichnung=Class 2
izhikevich typ 9 a=0.02
izhikevich typ 9 b=0.2
izhikevich typ 9 c=-65
izhikevich typ 9 d=6
izhikevich typ 9 tau=0.2
izhikevich typ 9 V=-70
izhikevich typ 9 U=-20
izhikevich typ 9 naE=30
izhikevich typ 9 bezeichnung=spike latency
izhikevich typ 10 a=0.05
izhikevich typ 10 b=0.26
izhikevich typ 10 c=-60
izhikevich typ 10 d=0
izhikevich typ 10 tau=0.2
izhikevich typ 10 V=-70
izhikevich typ 10 U=-20
izhikevich typ 10 naE=30
izhikevich typ 10 bezeichnung=subthreshold oscillations
izhikevich typ 11 a=0.1
izhikevich typ 11 b=0.26
izhikevich typ 11 c=-60
izhikevich typ 11 d=-1
izhikevich typ 11 tau=0.2
izhikevich typ 11 V=-70
izhikevich typ 11 U=-20
izhikevich typ 11 naE=30
izhikevich typ 11 bezeichnung=resonator
izhikevich typ 12 a=0.02
izhikevich typ 12 b=-0.1
izhikevich typ 12 c=-55
izhikevich typ 12 d=6
izhikevich typ 12 tau=0.2
izhikevich typ 12 V=-70
izhikevich typ 12 U=-20
izhikevich typ 12 naE=30
izhikevich typ 12 bezeichnung=integrator
izhikevich typ 13 a=0.03
izhikevich typ 13 b=0.25
izhikevich typ 13 c=-60
izhikevich typ 13 d=4
izhikevich typ 13 tau=0.2
izhikevich typ 13 V=-70
izhikevich typ 13 U=-20
izhikevich typ 13 naE=30
izhikevich typ 13 bezeichnung=rebound spike
izhikevich typ 14 a=0.03
izhikevich typ 14 b=0.25
izhikevich typ 14 c=-52
izhikevich typ 14 d=0
izhikevich typ 14 tau=0.2
izhikevich typ 14 V=-70
izhikevich typ 14 U=-20
izhikevich typ 14 naE=30
izhikevich typ 14 bezeichnung=rebound burst
izhikevich typ 15 a=0.03
izhikevich typ 15 b=0.25
izhikevich typ 15 c=-60
izhikevich typ 15 d=4
izhikevich typ 15 tau=0.2
izhikevich typ 15 V=-70
izhikevich typ 15 U=-20
izhikevich typ 15 naE=30
izhikevich typ 15 bezeichnung=threshold variability
izhikevich typ 16 a=1
izhikevich typ 16 b=1.5
izhikevich typ 16 c=-60
izhikevich typ 16 d=0
izhikevich typ 16 tau=0.2
izhikevich typ 16 V=-70
izhikevich typ 16 U=-20
izhikevich typ 16 naE=30
izhikevich typ 16 bezeichnung=bistability
izhikevich typ 17 a=1
izhikevich typ 17 b=0.2
izhikevich typ 17 c=-60
izhikevich typ 17 d=-21
izhikevich typ 17 tau=0.2
izhikevich typ 17 V=-70
izhikevich typ 17 U=-20
izhikevich typ 17 naE=30
izhikevich typ 17 bezeichnung=DAP
izhikevich typ 18 a=0.02
izhikevich typ 18 b=1
izhikevich typ 18 c=-55
izhikevich typ 18 d=4
izhikevich typ 18 tau=0.2
izhikevich typ 18 V=-70
izhikevich typ 18 U=-20
izhikevich typ 18 naE=30
izhikevich typ 18 bezeichnung=accomodation
izhikevich typ 19 a=-0.02
izhikevich typ 19 b=-1
izhikevich typ 19 c=-60
izhikevich typ 19 d=8
izhikevich typ 19 tau=0.2
izhikevich typ 19 V=-70
izhikevich typ 19 U=-20
izhikevich typ 19 naE=30
izhikevich typ 19 bezeichnung=inhibition-induced spiking
izhikevich typ 20 a=-0.026
izhikevich typ 20 b=-1
izhikevich typ 20 c=-45
izhikevich typ 20 d=0
izhikevich typ 20 tau=0.2
izhikevich typ 20 V=-70
izhikevich typ 20 U=-20
izhikevich typ 20 naE=30
izhikevich typ 20 bezeichnung=inhibition-induced bursting
[ende izhikevich standardtypen] ***********************