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5-neuron-model of neocortex for producing realistic extracellular AP shapes (Van Dijck et al. 2012)
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Model Information
Model File
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Accession:
226812
This is a 5-neuron model of neocortex, containing one tufted layer-5 pyramidal cell, two non-tufted pyramidal cells, and two inhibitory interneurons. It was used to reproduce extracellular spike shapes in a study comparing algorithms for spike sorting and electrode selection. The neuron models are adapted from Dyhrfjeld-Johnsen et al. (2005).
Reference:
1 .
Van Dijck G, Seidl K, Paul O, Ruther P, Van Hulle MM, Maex R (2012) Enhancing the yield of high-density electrode arrays through automated electrode selection.
Int J Neural Syst
22
:1-19
[
PubMed
]
Citations
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Model Information
(Click on a link to find other models with that property)
Model Type:
Extracellular;
Neuron or other electrically excitable cell;
Realistic Network;
Brain Region(s)/Organism:
Cell Type(s):
Neocortex U1 L5B pyramidal pyramidal tract GLU cell;
Neocortex U1 L2/6 pyramidal intratelencephalic GLU cell;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
GENESIS;
Model Concept(s):
Implementer(s):
Maex, Reinoud [reinoud at bbf.uia.ac.be];
Search NeuronDB
for information about:
Neocortex U1 L5B pyramidal pyramidal tract GLU cell
;
Neocortex U1 L2/6 pyramidal intratelencephalic GLU cell
;
Download the displayed file
/
Five-neuron-neocortex
Granule_cell
Axon10.p
Axon20.p
Gran_chan.g
Gran_chan_KA.g
*
Other models using Gran_chan_KA.g:
Cerebellar granular layer (Maex and De Schutter 1998)
Gran_chan_KCa.g
*
Other models using Gran_chan_KCa.g:
Cerebellar granular layer (Maex and De Schutter 1998)
Gran_chan_KCa_tab.g
*
Other models using Gran_chan_KCa_tab.g:
Cerebellar granular layer (Maex and De Schutter 1998)
Gran_chan_tab.g
*
Other models using Gran_chan_tab.g:
5-neuron-model of neocortex for producing realistic extracellular AP shapes (Van Dijck et al. 2012)
Cerebellar granular layer (Maex and De Schutter 1998)
Gran_comp.g
Gran_comp_soma_dend.g
Gran_comp_soma_dend_axon.g
Gran_comp_soma_dend_noH.g
Gran_const.g
*
Other models using Gran_const.g:
5-neuron-model of neocortex for producing realistic extracellular AP shapes (Van Dijck et al. 2012)
Cerebellar granular layer (Maex and De Schutter 1998)
Gran_synchan.g
Gran1M0.p
*
Other models using Gran1M0.p:
Cerebellar granular layer (Maex and De Schutter 1998)
Gran1M0_dend.p
Gran1M0_dend_axon.p
Gran1M0_dend10.p
Gran1M0_dend20.p
Gran1M0_dend3D.p
Gran1M0_dend3D_axon.p
Gran1M0_dend3D_axon10_RM2.p
Gran1M0_dend3D_axon20_RM2.p
Gran1M0_dend3D_axon3.p
Gran1M0_dend3D_axon3_RM2.p
Gran1M0_dend3D_axon5_RM2.p
Gran1M0_dend40.p
tabCaHVA37.data
tabH37.data
tabInNa37.data
tabKA37.data
tabKCa37.data
tabKDr37.data
TEST.g
TEST_dend.g
TEST_exp.g
TEST_gapjunction.g
TEST_soma_dend_axon.g
TEST2_gapjunction.g
TEST2exp_gapjunction.g
TEST3_gapjunction.g
TEST4_gapjunction.g
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