Dynamical model of olfactory bulb mitral cell (Rubin, Cleland 2006)

 Download zip file   Auto-launch 
Help downloading and running models
Accession:64296
This four-compartment mitral cell exhibits endogenous subthreshold oscillations, phase resetting, and evoked spike phasing properties as described in electrophysiological studies of mitral cells. It is derived from the prior work of Davison et al (2000) and Bhalla and Bower (1993). See readme.txt for details.
Reference:
1 . Rubin DB, Cleland TA (2006) Dynamical mechanisms of odor processing in olfactory bulb mitral cells. J Neurophysiol 96:555-68 [PubMed]
Citations  Citation Browser
Model Information (Click on a link to find other models with that property)
Model Type: Neuron or other electrically excitable cell;
Brain Region(s)/Organism:
Cell Type(s): Olfactory bulb main mitral GLU cell;
Channel(s): I Na,p; I Na,t; I L high threshold; I A; I K; I K,leak; I h; I K,Ca; I Sodium; I Calcium; I Potassium; I A, slow;
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Bursting; Temporal Pattern Generation; Oscillations; Synchronization; Simplified Models; Delay; Olfaction;
Implementer(s): Rubin, Daniel B ;
Search NeuronDB for information about:  Olfactory bulb main mitral GLU cell; I Na,p; I Na,t; I L high threshold; I A; I K; I K,leak; I h; I K,Ca; I Sodium; I Calcium; I Potassium; I A, slow;
/
mitral
readme.txt *
cadecay.mod *
Ih.mod *
INaP.mod
kA.mod
kca3.mod
kfasttab.mod *
kO.mod *
kslowtab.mod *
lcafixed.mod *
nafast.mod
kfast_k.inf *
kfast_k.tau *
kfast_n.inf *
kfast_n.tau *
kslow_k.inf *
kslow_k.tau *
kslow_n.inf *
kslow_n.tau *
mitral.hoc
mosinit.hoc *
tabchannels.hoc *
                            
-100 5.556
-99.85 5.564
-99.7 5.572
-99.55 5.576
-99.4 5.584
-99.25 5.592
-99.1 5.6
-98.95 5.608
-98.8 5.616
-98.65 5.624
-98.5 5.632
-98.35 5.64
-98.2 5.644
-98.05 5.652
-97.9 5.66
-97.75 5.668
-97.6 5.676
-97.45 5.684
-97.3 5.692
-97.15 5.7
-97 5.708
-96.85 5.716
-96.7 5.724
-96.55 5.732
-96.4 5.74
-96.25 5.748
-96.1 5.756
-95.95 5.764
-95.8 5.772
-95.65 5.78
-95.5 5.788
-95.35 5.796
-95.2 5.804
-95.05 5.812
-94.9 5.82
-94.75 5.828
-94.6 5.836
-94.45 5.844
-94.3 5.852
-94.15 5.86
-94 5.868
-93.85 5.876
-93.7 5.884
-93.55 5.892
-93.4 5.9
-93.25 5.912
-93.1 5.92
-92.95 5.928
-92.8 5.936
-92.65 5.944
-92.5 5.952
-92.35 5.96
-92.2 5.968
-92.05 5.98
-91.9 5.988
-91.75 5.996
-91.6 6.004
-91.45 6.012
-91.3 6.02
-91.15 6.028
-91 6.04
-90.85 6.048
-90.7 6.056
-90.55 6.064
-90.4 6.072
-90.25 6.084
-90.1 6.092
-89.95 6.1
-89.8 6.108
-89.65 6.12
-89.5 6.128
-89.35 6.136
-89.2 6.144
-89.05 6.156
-88.9 6.164
-88.75 6.172
-88.6 6.18
-88.45 6.192
-88.3 6.2
-88.15 6.208
-88 6.22
-87.85 6.228
-87.7 6.236
-87.55 6.248
-87.4 6.256
-87.25 6.264
-87.1 6.276
-86.95 6.284
-86.8 6.296
-86.65 6.304
-86.5 6.312
-86.35 6.324
-86.2 6.332
-86.05 6.34
-85.9 6.352
-85.75 6.36
-85.6 6.372
-85.45 6.38
-85.3 6.392
-85.15 6.4
-85 6.412
-84.85 6.42
-84.7 6.432
-84.55 6.44
-84.4 6.448
-84.25 6.46
-84.1 6.468
-83.95 6.48
-83.8 6.492
-83.65 6.5
-83.5 6.512
-83.35 6.52
-83.2 6.532
-83.05 6.54
-82.9 6.552
-82.75 6.56
-82.6 6.572
-82.45 6.584
-82.3 6.592
-82.15 6.604
-82 6.612
-81.85 6.624
-81.7 6.636
-81.55 6.644
-81.4 6.656
-81.25 6.668
-81.1 6.676
-80.95 6.688
-80.8 6.7
-80.65 6.708
-80.5 6.72
-80.35 6.732
-80.2 6.744
-80.05 6.752
-79.9 6.764
-79.75 6.776
-79.6 6.788
-79.45 6.796
-79.3 6.808
-79.15 6.82
-79 6.832
-78.85 6.84
-78.7 6.852
-78.55 6.864
-78.4 6.876
-78.25 6.888
-78.1 6.9
-77.95 6.912
-77.8 6.92
-77.65 6.932
-77.5 6.944
-77.35 6.956
-77.2 6.968
-77.05 6.98
-76.9 6.992
-76.75 7.004
-76.6 7.016
-76.45 7.028
-76.3 7.04
-76.15 7.052
-76 7.064
-75.85 7.076
-75.7 7.088
-75.55 7.1
-75.4 7.112
-75.25 7.128
-75.1 7.14
-74.95 7.152
-74.8 7.164
-74.65 7.176
-74.5 7.188
-74.35 7.204
-74.2 7.216
-74.05 7.228
-73.9 7.24
-73.75 7.256
-73.6 7.268
-73.45 7.28
-73.3 7.296
-73.15 7.308
-73 7.32
-72.85 7.336
-72.7 7.348
-72.55 7.36
-72.4 7.376
-72.25 7.388
-72.1 7.404
-71.95 7.416
-71.8 7.432
-71.65 7.444
-71.5 7.46
-71.35 7.472
-71.2 7.488
-71.05 7.5
-70.9 7.516
-70.75 7.528
-70.6 7.544
-70.45 7.556
-70.3 7.572
-70.15 7.584
-70 7.6
-69.85 7.616
-69.7 7.628
-69.55 7.644
-69.4 7.656
-69.25 7.672
-69.1 7.688
-68.95 7.7
-68.8 7.716
-68.65 7.728
-68.5 7.744
-68.35 7.76
-68.2 7.772
-68.05 7.788
-67.9 7.804
-67.75 7.816
-67.6 7.832
-67.45 7.848
-67.3 7.864
-67.15 7.876
-67 7.892
-66.85 7.908
-66.7 7.924
-66.55 7.936
-66.4 7.952
-66.25 7.968
-66.1 7.984
-65.95 8
-65.8 8.016
-65.65 8.028
-65.5 8.044
-65.35 8.06
-65.2 8.076
-65.05 8.092
-64.9 8.108
-64.75 8.124
-64.6 8.14
-64.45 8.156
-64.3 8.172
-64.15 8.188
-64 8.204
-63.85 8.22
-63.7 8.236
-63.55 8.252
-63.4 8.268
-63.25 8.284
-63.1 8.3
-62.95 8.32
-62.8 8.336
-62.65 8.352
-62.5 8.368
-62.35 8.384
-62.2 8.4
-62.05 8.42
-61.9 8.436
-61.75 8.452
-61.6 8.472
-61.45 8.488
-61.3 8.504
-61.15 8.524
-61 8.54
-60.85 8.556
-60.7 8.576
-60.55 8.592
-60.4 8.612
-60.25 8.628
-60.1 8.648
-59.95 8.664
-59.8 8.684
-59.65 8.7
-59.5 8.72
-59.35 8.736
-59.2 8.756
-59.05 8.772
-58.9 8.792
-58.75 8.812
-58.6 8.828
-58.45 8.848
-58.3 8.868
-58.15 8.884
-58 8.904
-57.85 8.924
-57.7 8.944
-57.55 8.964
-57.4 8.98
-57.25 9
-57.1 9.02
-56.95 9.04
-56.8 9.06
-56.65 9.08
-56.5 9.1
-56.35 9.12
-56.2 9.14
-56.05 9.16
-55.9 9.18
-55.75 9.2
-55.6 9.22
-55.45 9.24
-55.3 9.26
-55.15 9.28
-55 9.304
-54.85 9.324
-54.7 9.344
-54.55 9.364
-54.4 9.388
-54.25 9.408
-54.1 9.428
-53.95 9.452
-53.8 9.472
-53.65 9.492
-53.5 9.516
-53.35 9.536
-53.2 9.56
-53.05 9.58
-52.9 9.604
-52.75 9.624
-52.6 9.648
-52.45 9.668
-52.3 9.692
-52.15 9.716
-52 9.736
-51.85 9.76
-51.7 9.784
-51.55 9.804
-51.4 9.828
-51.25 9.852
-51.1 9.876
-50.95 9.9
-50.8 9.924
-50.65 9.948
-50.5 9.972
-50.35 9.996
-50.2 10.02
-50.05 10.044
-49.9 10.068
-49.75 10.092
-49.6 10.116
-49.45 10.14
-49.3 10.164
-49.15 10.188
-49 10.216
-48.85 10.24
-48.7 10.264
-48.55 10.292
-48.4 10.316
-48.25 10.34
-48.1 10.368
-47.95 10.392
-47.8 10.42
-47.65 10.444
-47.5 10.472
-47.35 10.5
-47.2 10.524
-47.05 10.552
-46.9 10.58
-46.75 10.608
-46.6 10.636
-46.45 10.664
-46.3 10.688
-46.15 10.716
-46 10.748
-45.85 10.776
-45.7 10.804
-45.55 10.832
-45.4 10.86
-45.25 10.888
-45.1 10.92
-44.95 10.948
-44.8 10.98
-44.65 11.008
-44.5 11.04
-44.35 11.068
-44.2 11.1
-44.05 11.132
-43.9 11.16
-43.75 11.192
-43.6 11.224
-43.45 11.256
-43.3 11.288
-43.15 11.316
-43 11.348
-42.85 11.38
-42.7 11.412
-42.55 11.444
-42.4 11.476
-42.25 11.508
-42.1 11.54
-41.95 11.572
-41.8 11.604
-41.65 11.636
-41.5 11.668
-41.35 11.704
-41.2 11.736
-41.05 11.768
-40.9 11.8
-40.75 11.832
-40.6 11.86
-40.45 11.892
-40.3 11.924
-40.15 11.956
-40 11.988
-39.85 12.02
-39.7 12.052
-39.55 12.08
-39.4 12.112
-39.25 12.14
-39.1 12.172
-38.95 12.2
-38.8 12.228
-38.65 12.26
-38.5 12.288
-38.35 12.312
-38.2 12.34
-38.05 12.368
-37.9 12.392
-37.75 12.416
-37.6 12.44
-37.45 12.464
-37.3 12.488
-37.15 12.508
-37 12.528
-36.85 12.548
-36.7 12.568
-36.55 12.584
-36.4 12.6
-36.25 12.616
-36.1 12.628
-35.95 12.64
-35.8 12.652
-35.65 12.664
-35.5 12.672
-35.35 12.68
-35.2 12.684
-35.05 12.688
-34.9 12.692
-34.75 12.692
-34.6 12.692
-34.45 12.688
-34.3 12.684
-34.15 12.68
-34 12.676
-33.85 12.668
-33.7 12.656
-33.55 12.648
-33.4 12.636
-33.25 12.624
-33.1 12.612
-32.95 12.596
-32.8 12.58
-32.65 12.564
-32.5 12.544
-32.35 12.528
-32.2 12.508
-32.05 12.488
-31.9 12.468
-31.75 12.444
-31.6 12.424
-31.45 12.4
-31.3 12.376
-31.15 12.352
-31 12.328
-30.85 12.3
-30.7 12.276
-30.55 12.248
-30.4 12.224
-30.25 12.196
-30.1 12.168
-29.95 12.14
-29.8 12.112
-29.65 12.084
-29.5 12.056
-29.35 12.028
-29.2 12
-29.05 11.972
-28.9 11.944
-28.75 11.916
-28.6 11.888
-28.45 11.856
-28.3 11.828
-28.15 11.8
-28 11.768
-27.85 11.74
-27.7 11.712
-27.55 11.68
-27.4 11.652
-27.25 11.624
-27.1 11.592
-26.95 11.564
-26.8 11.536
-26.65 11.504
-26.5 11.476
-26.35 11.448
-26.2 11.416
-26.05 11.388
-25.9 11.36
-25.75 11.332
-25.6 11.304
-25.45 11.272
-25.3 11.244
-25.15 11.216
-25 11.188
-24.85 11.16
-24.7 11.132
-24.55 11.104
-24.4 11.076
-24.25 11.052
-24.1 11.024
-23.95 10.996
-23.8 10.968
-23.65 10.94
-23.5 10.912
-23.35 10.888
-23.2 10.86
-23.05 10.832
-22.9 10.804
-22.75 10.78
-22.6 10.752
-22.45 10.724
-22.3 10.696
-22.15 10.668
-22 10.64
-21.85 10.616
-21.7 10.588
-21.55 10.56
-21.4 10.532
-21.25 10.504
-21.1 10.476
-20.95 10.448
-20.8 10.42
-20.65 10.392
-20.5 10.364
-20.35 10.332
-20.2 10.304
-20.05 10.276
-19.9 10.248
-19.75 10.216
-19.6 10.188
-19.45 10.156
-19.3 10.128
-19.15 10.096
-19 10.068
-18.85 10.036
-18.7 10.008
-18.55 9.976
-18.4 9.944
-18.25 9.912
-18.1 9.88
-17.95 9.848
-17.8 9.816
-17.65 9.784
-17.5 9.752
-17.35 9.72
-17.2 9.688
-17.05 9.656
-16.9 9.62
-16.75 9.588
-16.6 9.556
-16.45 9.52
-16.3 9.488
-16.15 9.452
-16 9.42
-15.85 9.384
-15.7 9.348
-15.55 9.316
-15.4 9.28
-15.25 9.244
-15.1 9.208
-14.95 9.172
-14.8 9.136
-14.65 9.1
-14.5 9.064
-14.35 9.028
-14.2 8.992
-14.05 8.956
-13.9 8.92
-13.75 8.884
-13.6 8.848
-13.45 8.812
-13.3 8.776
-13.15 8.74
-13 8.704
-12.85 8.668
-12.7 8.632
-12.55 8.596
-12.4 8.564
-12.25 8.528
-12.1 8.496
-11.95 8.46
-11.8 8.428
-11.65 8.396
-11.5 8.364
-11.35 8.332
-11.2 8.3
-11.05 8.268
-10.9 8.236
-10.75 8.208
-10.6 8.176
-10.45 8.148
-10.3 8.12
-10.15 8.092
-10 8.064
-9.85 8.036
-9.7 8.008
-9.55 7.984
-9.4 7.96
-9.25 7.932
-9.1 7.908
-8.95 7.884
-8.8 7.86
-8.65 7.836
-8.5 7.812
-8.35 7.788
-8.2 7.768
-8.05 7.744
-7.9 7.72
-7.75 7.7
-7.6 7.676
-7.45 7.652
-7.3 7.632
-7.15 7.608
-7 7.588
-6.85 7.564
-6.7 7.54
-6.55 7.52
-6.4 7.496
-6.25 7.472
-6.1 7.452
-5.95 7.428
-5.8 7.404
-5.65 7.38
-5.5 7.356
-5.35 7.332
-5.2 7.308
-5.05 7.284
-4.9 7.26
-4.75 7.236
-4.6 7.212
-4.45 7.184
-4.3 7.16
-4.15 7.132
-4 7.108
-3.85 7.08
-3.7 7.052
-3.55 7.024
-3.4 6.996
-3.25 6.968
-3.1 6.94
-2.95 6.912
-2.8 6.884
-2.65 6.852
-2.5 6.824
-2.35 6.792
-2.2 6.76
-2.05 6.728
-1.9 6.7
-1.75 6.668
-1.6 6.632
-1.45 6.6
-1.3 6.568
-1.15 6.532
-1 6.5
-0.85 6.464
-0.7 6.432
-0.55 6.396
-0.4 6.36
-0.25 6.324
-0.1 6.288
0.05 6.252
0.2 6.216
0.35 6.176
0.5 6.14
0.65 6.104
0.8 6.064
0.95 6.024
1.1 5.988
1.25 5.948
1.4 5.908
1.55 5.868
1.7 5.828
1.85 5.788
2 5.748
2.15 5.708
2.3 5.668
2.45 5.628
2.6 5.588
2.75 5.544
2.9 5.504
3.05 5.464
3.2 5.42
3.35 5.38
3.5 5.34
3.65 5.296
3.8 5.256
3.95 5.212
4.1 5.172
4.25 5.128
4.4 5.088
4.55 5.044
4.7 5.004
4.85 4.96
5 4.92
5.15 4.876
5.3 4.832
5.45 4.792
5.6 4.752
5.75 4.708
5.9 4.668
6.05 4.624
6.2 4.584
6.35 4.544
6.5 4.504
6.65 4.464
6.8 4.424
6.95 4.384
7.1 4.344
7.25 4.304
7.4 4.268
7.55 4.228
7.7 4.192
7.85 4.152
8 4.116
8.15 4.08
8.3 4.044
8.45 4.008
8.6 3.972
8.75 3.936
8.9 3.904
9.05 3.868
9.2 3.836
9.35 3.8
9.5 3.768
9.65 3.736
9.8 3.704
9.95 3.672
10.1 3.644
10.25 3.612
10.4 3.58
10.55 3.552
10.7 3.524
10.85 3.496
11 3.468
11.15 3.44
11.3 3.412
11.45 3.384
11.6 3.356
11.75 3.332
11.9 3.304
12.05 3.28
12.2 3.256
12.35 3.228
12.5 3.204
12.65 3.18
12.8 3.156
12.95 3.136
13.1 3.112
13.25 3.088
13.4 3.068
13.55 3.044
13.7 3.024
13.85 3
14 2.98
14.15 2.96
14.3 2.94
14.45 2.92
14.6 2.9
14.75 2.88
14.9 2.86
15.05 2.844
15.2 2.824
15.35 2.808
15.5 2.788
15.65 2.772
15.8 2.752
15.95 2.736
16.1 2.72
16.25 2.7
16.4 2.684
16.55 2.668
16.7 2.652
16.85 2.636
17 2.616
17.15 2.6
17.3 2.584
17.45 2.568
17.6 2.552
17.75 2.536
17.9 2.52
18.05 2.504
18.2 2.488
18.35 2.472
18.5 2.456
18.65 2.44
18.8 2.424
18.95 2.408
19.1 2.392
19.25 2.376
19.4 2.36
19.55 2.344
19.7 2.328
19.85 2.312
20 2.296
20.15 2.28
20.3 2.264
20.45 2.248
20.6 2.228
20.75 2.212
20.9 2.196
21.05 2.18
21.2 2.164
21.35 2.148
21.5 2.132
21.65 2.116
21.8 2.1
21.95 2.084
22.1 2.068
22.25 2.052
22.4 2.036
22.55 2.02
22.7 2.004
22.85 1.988
23 1.972
23.15 1.956
23.3 1.94
23.45 1.924
23.6 1.908
23.75 1.892
23.9 1.876
24.05 1.864
24.2 1.848
24.35 1.832
24.5 1.816
24.65 1.804
24.8 1.788
24.95 1.772
25.1 1.76
25.25 1.744
25.4 1.728
25.55 1.716
25.7 1.7
25.85 1.688
26 1.676
26.15 1.66
26.3 1.648
26.45 1.636
26.6 1.624
26.75 1.612
26.9 1.6
27.05 1.588
27.2 1.576
27.35 1.564
27.5 1.552
27.65 1.544
27.8 1.532
27.95 1.52
28.1 1.512
28.25 1.504
28.4 1.492
28.55 1.484
28.7 1.476
28.85 1.468
29 1.46
29.15 1.452
29.3 1.444
29.45 1.44
29.6 1.432
29.75 1.428
29.9 1.42
30.05 1.416
30.2 1.408
30.35 1.404
30.5 1.4
30.65 1.396
30.8 1.392
30.95 1.388
31.1 1.388
31.25 1.384
31.4 1.38
31.55 1.376
31.7 1.376
31.85 1.372
32 1.372
32.15 1.368
32.3 1.368
32.45 1.368
32.6 1.364
32.75 1.364
32.9 1.364
33.05 1.364
33.2 1.364
33.35 1.36
33.5 1.36
33.65 1.36
33.8 1.36
33.95 1.36
34.1 1.36
34.25 1.36
34.4 1.36
34.55 1.36
34.7 1.36
34.85 1.36
35 1.36
35.15 1.36
35.3 1.36
35.45 1.36
35.6 1.36
35.75 1.36
35.9 1.36
36.05 1.36
36.2 1.36
36.35 1.36
36.5 1.36
36.65 1.36
36.8 1.36
36.95 1.36
37.1 1.36
37.25 1.36
37.4 1.36
37.55 1.36
37.7 1.36
37.85 1.36
38 1.36
38.15 1.36
38.3 1.36
38.45 1.36
38.6 1.36
38.75 1.36
38.9 1.36
39.05 1.36
39.2 1.36
39.35 1.36
39.5 1.36
39.65 1.36
39.8 1.36
39.95 1.36
40.1 1.36
40.25 1.36
40.4 1.36
40.55 1.36
40.7 1.36
40.85 1.36
41 1.36
41.15 1.36
41.3 1.36
41.45 1.36
41.6 1.36
41.75 1.36
41.9 1.36
42.05 1.36
42.2 1.36
42.35 1.36
42.5 1.36
42.65 1.36
42.8 1.36
42.95 1.36
43.1 1.36
43.25 1.36
43.4 1.36
43.55 1.36
43.7 1.36
43.85 1.36
44 1.36
44.15 1.36
44.3 1.36
44.45 1.36
44.6 1.36
44.75 1.36
44.9 1.36
45.05 1.36
45.2 1.36
45.35 1.36
45.5 1.36
45.65 1.36
45.8 1.36
45.95 1.36
46.1 1.36
46.25 1.36
46.4 1.36
46.55 1.36
46.7 1.36
46.85 1.36
47 1.36
47.15 1.36
47.3 1.36
47.45 1.36
47.6 1.36
47.75 1.36
47.9 1.36
48.05 1.36
48.2 1.36
48.35 1.36
48.5 1.36
48.65 1.36
48.8 1.36
48.95 1.36
49.1 1.36
49.25 1.36
49.4 1.36
49.55 1.36
49.7 1.36
49.85 1.36
50 1.36