Citations for Synthesis of spatial tuning functions from theta cell spike trains (Welday et al., 2011)

Legends: Link to a Model Reference cited by multiple papers


Welday AC, Shlifer IG, Bloom ML, Zhang K, Blair HT (2011) Cosine directional tuning of theta cell burst frequencies: evidence for spatial coding by oscillatory interference. J Neurosci 31:16157-76 [PubMed]

References and models cited by this paper

References and models that cite this paper

Bissiere S, Zelikowsky M, Ponnusamy R, Jacobs NS, Blair HT, Fanselow MS (2011) Electrical synapses control hippocampal contributions to fear learning and memory. Science 331:87-91 [Journal] [PubMed]
Blair HT, Gupta K, Zhang K (2008) Conversion of a phase- to a rate-coded position signal by a three-stage model of theta cells, grid cells, and place cells. Hippocampus 18:1239-55 [Journal] [PubMed]
Blair HT, Sharp PE (1995) Anticipatory head direction signals in anterior thalamus: evidence for a thalamocortical circuit that integrates angular head motion to compute head direction. J Neurosci 15:6260-70 [PubMed]
Blair HT, Welday AC, Zhang K (2007) Scale-invariant memory representations emerge from moiré interference between grid fields that produce theta oscillations: a computational model. J Neurosci 27:3211-29 [Journal] [PubMed]
Brandon MP, Bogaard AR, Libby CP, Connerney MA, Gupta K, Hasselmo ME (2011) Reduction of theta rhythm dissociates grid cell spatial periodicity from directional tuning. Science 332:595-9 [Journal] [PubMed]
Brun VH, Leutgeb S, Wu HQ, Schwarcz R, Witter MP, Moser EI, Moser MB (2008) Impaired spatial representation in CA1 after lesion of direct input from entorhinal cortex. Neuron 57:290-302 [Journal] [PubMed]
Brun VH, Solstad T, Kjelstrup KB, Fyhn M, Witter MP, Moser EI, Moser MB (2008) Progressive increase in grid scale from dorsal to ventral medial entorhinal cortex. Hippocampus 18:1200-12 [Journal] [PubMed]
Burgess N (2008) Grid cells and theta as oscillatory interference: theory and predictions. Hippocampus 18:1157-74 [Journal] [PubMed]
Burgess N, Barry C, Jeffery KJ, O'Keefe J (2005) A grid and place cell model of path integration utilizing phase precession versus theta Paper presented 1st Annual conference on Computational Cognitive Neuroscience, November 10-11
Burgess N, Barry C, O'Keefe J (2007) An oscillatory interference model of grid cell firing. Hippocampus 17:801-12 [Journal] [PubMed]
Buzsaki G (2006) Rhythms of the Brain
Düzel E, Penny WD, Burgess N (2010) Brain oscillations and memory. Curr Opin Neurobiol 20:143-9 [Journal] [PubMed]
Eichenbaum H, Otto T, Cohen NJ (1992) The hippocampus--what does it do? Behav Neural Biol 57:2-36 [PubMed]
Etienne AS, Jeffery KJ (2004) Path integration in mammals. Hippocampus 14:180-92 [Journal] [PubMed]
Freund TF, Antal M (1988) GABA-containing neurons in the septum control inhibitory interneurons in the hippocampus. Nature 336:170-3 [Journal] [PubMed]
Geisler C, Diba K, Pastalkova E, Mizuseki K, Royer S, Buzsáki G (2010) Temporal delays among place cells determine the frequency of population theta oscillations in the hippocampus. Proc Natl Acad Sci U S A 107:7957-62 [Journal] [PubMed]
Geisler C, Robbe D, Zugaro M, Sirota A, Buzsáki G (2007) Hippocampal place cell assemblies are speed-controlled oscillators. Proc Natl Acad Sci U S A 104:8149-54 [Journal] [PubMed]
Giocomo LM, Zilli EA, Fransén E, Hasselmo ME (2007) Temporal frequency of subthreshold oscillations scales with entorhinal grid cell field spacing. Science 315:1719-22 [Journal] [PubMed]
Gogolák G, Petsche H, Sterc J, Stumpf C (1967) Septum cell activity in the rabbit under reticular stimulation. Brain Res 5:508-10 [PubMed]
Gorchetchnikov A, Grossberg S (2007) Space, time and learning in the hippocampus: how fine spatial and temporal scales are expanded into population codes for behavioral control. Neural Netw 20:182-93 [Journal] [PubMed]
Hafting T, Fyhn M, Molden S, Moser MB, Moser EI (2005) Microstructure of a spatial map in the entorhinal cortex. Nature 436:801-6 [Journal] [PubMed]
Hartley T, Burgess N, Lever C, Cacucci F, O'Keefe J (2000) Modeling place fields in terms of the cortical inputs to the hippocampus. Hippocampus 10:369-79 [Journal] [PubMed]
Hartmann WM (1998) Signals, sound, and sensation
Harvey CD, Collman F, Dombeck DA, Tank DW (2009) Intracellular dynamics of hippocampal place cells during virtual navigation. Nature 461:941-6 [Journal] [PubMed]
Hasselmo ME (2008) Grid cell mechanisms and function: contributions of entorhinal persistent spiking and phase resetting. Hippocampus 18:1213-29 [Journal] [PubMed]
Hasselmo ME, Giocomo LM, Brandon MP, Yoshida M (2010) Cellular dynamical mechanisms for encoding the time and place of events along spatiotemporal trajectories in episodic memory. Behav Brain Res 215:261-74 [Journal] [PubMed]
Hasselmo ME, Giocomo LM, Zilli EA (2007) Grid cell firing may arise from interference of theta frequency membrane potential oscillations in single neurons. Hippocampus 17:1252-71 [Journal] [PubMed]
Hines ML, Morse T, Migliore M, Carnevale NT, Shepherd GM (2004) ModelDB: A Database to Support Computational Neuroscience. J Comput Neurosci 17:7-11 [Journal] [PubMed]
Hopfield JJ, Brody CD (2001) What is a moment? Transient synchrony as a collective mechanism for spatiotemporal integration. Proc Natl Acad Sci U S A 98:1282-7 [Journal] [PubMed]
   Hopfield and Brody model (Hopfield, Brody 2000) (NEURON+python) [Model]
   Hopfield and Brody model (Hopfield, Brody 2000) [Model]
Jeewajee A, Barry C, O'Keefe J, Burgess N (2008) Grid cells and theta as oscillatory interference: electrophysiological data from freely moving rats. Hippocampus 18:1175-85 [Journal] [PubMed]
Jeewajee A, Lever C, Burton S, O'Keefe J, Burgess N (2008) Environmental novelty is signaled by reduction of the hippocampal theta frequency. Hippocampus 18:340-8 [Journal] [PubMed]
Jones EG (1985) The Thalamus
Kamondi A, Acsády L, Wang XJ, Buzsáki G (1998) Theta oscillations in somata and dendrites of hippocampal pyramidal cells in vivo: activity-dependent phase-precession of action potentials. Hippocampus 8:244-61 [Journal] [PubMed]
King C, Recce M, O'Keefe J (1998) The rhythmicity of cells of the medial septum/diagonal band of Broca in the awake freely moving rat: relationships with behaviour and hippocampal theta. Eur J Neurosci 10:464-77 [PubMed]
Knierim JJ, Kudrimoti HS, McNaughton BL (1995) Place cells, head direction cells, and the learning of landmark stability. J Neurosci 15:1648-59 [PubMed]
Knierim JJ, Kudrimoti HS, McNaughton BL (1998) Interactions between idiothetic cues and external landmarks in the control of place cells and head direction cells. J Neurophysiol 80:425-46 [Journal] [PubMed]
Koenig J, Linder AN, Leutgeb JK, Leutgeb S (2011) The spatial periodicity of grid cells is not sustained during reduced theta oscillations. Science 332:592-5 [Journal] [PubMed]
Koepsell K, Wang X, Hirsch JA, Sommer FT (2010) Exploring the function of neural oscillations in early sensory systems. Front Neurosci 4:53 [Journal] [PubMed]
Laurent G, Stopfer M, Friedrich RW, Rabinovich MI, Volkovskii A, Abarbanel HD (2001) Odor encoding as an active, dynamical process: experiments, computation, and theory. Annu Rev Neurosci 24:263-97 [Journal] [PubMed]
Lengyel M, Szatmáry Z, Erdi P (2003) Dynamically detuned oscillations account for the coupled rate and temporal code of place cell firing. Hippocampus 13:700-14 [Journal] [PubMed]
Leutgeb JK, Leutgeb S, Moser MB, Moser EI (2007) Pattern separation in the dentate gyrus and CA3 of the hippocampus. Science 315:961-6 [Journal] [PubMed]
Lever C, Burton S, Jeewajee A, O'Keefe J, Burgess N (2009) Boundary vector cells in the subiculum of the hippocampal formation. J Neurosci 29:9771-7 [Journal] [PubMed]
Losonczy A, Zemelman BV, Vaziri A, Magee JC (2010) Network mechanisms of theta related neuronal activity in hippocampal CA1 pyramidal neurons. Nat Neurosci 13:967-72 [Journal] [PubMed]
Lubenov EV, Siapas AG (2009) Hippocampal theta oscillations are travelling waves. Nature 459:534-9 [Journal] [PubMed]
Matell MS, Meck WH (2004) Cortico-striatal circuits and interval timing: coincidence detection of oscillatory processes. Brain Res Cogn Brain Res 21:139-70 [Journal] [PubMed]
McNaughton BL, Barnes CA, Gerrard JL, Gothard K, Jung MW, Knierim JJ, Kudrimoti H, Qin Y, Skaggs WE, Suster M, Weaver KL (1996) Deciphering the hippocampal polyglot: the hippocampus as a path integration system. J Exp Biol 199:173-85 [PubMed]
McNaughton BL, Battaglia FP, Jensen O, Moser EI, Moser MB (2006) Path integration and the neural basis of the 'cognitive map'. Nat Rev Neurosci 7:663-78 [Journal] [PubMed]
Mhatre H, Gorchetchnikov A, Grossberg S (2010) Grid cell hexagonal patterns formed by fast self-organized learning within entorhinal cortex. Hippocampus :
Miall C (1989) The storage of time intervals using oscillating neurons Neural Comput 1:359-371
Mizumori SJ, McNaughton BL, Barnes CA, Fox KB (1989) Preserved spatial coding in hippocampal CA1 pyramidal cells during reversible suppression of CA3c output: evidence for pattern completion in hippocampus. J Neurosci 9:3915-28 [PubMed]
Monaco JD, Abbott LF, Abbott LF (2011) Modular realignment of entorhinal grid cell activity as a basis for hippocampal remapping. J Neurosci 31:9414-25 [Journal] [PubMed]
   Modular grid cell responses as a basis for hippocampal remapping (Monaco and Abbott 2011) [Model]
Muller RU, Kubie JL (1987) The effects of changes in the environment on the spatial firing of hippocampal complex-spike cells. J Neurosci 7:1951-68 [PubMed]
Nadel L (1978) The hippocampus as a cognitive map
O'Keefe J, Burgess N (2005) Dual phase and rate coding in hippocampal place cells: theoretical significance and relationship to entorhinal grid cells. Hippocampus 15:853-66 [Journal] [PubMed]
O'Keefe J, Dostrovsky J (1971) The hippocampus as a spatial map. Preliminary evidence from unit activity in the freely-moving rat. Brain Res 34:171-5 [PubMed]
O'Keefe J, Recce ML (1993) Phase relationship between hippocampal place units and the EEG theta rhythm. Hippocampus 3:317-30 [Journal] [PubMed]
Paxinos G, Watson C (1998) The rat brain in stereotaxic coordinates (4th Ed)
PETSCHE H, GOGOLAK G, VANZWIETEN PA (1965) RHYTHMICITY OF SEPTAL CELL DISCHARGES AT VARIOUS LEVELS OF RETICULAR EXCITATION. Electroencephalogr Clin Neurophysiol 19:25-33 [PubMed]
Ranck JB (1973) Studies on single neurons in dorsal hippocampal formation and septum in unrestrained rats. I. Behavioral correlates and firing repertoires. Exp Neurol 41:461-531 [PubMed]
Redish AD, Elga AN, Touretzky DS (1996) A coupled attractor model of the rodent head direction system. Network 7:671-685
Remme MW, Lengyel M, Gutkin BS (2010) Democracy-independence trade-off in oscillating dendrites and its implications for grid cells. Neuron 66:429-37 [Journal] [PubMed]
Rivas J, Gaztelu JM, García-Austt E (1996) Changes in hippocampal cell discharge patterns and theta rhythm spectral properties as a function of walking velocity in the guinea pig. Exp Brain Res 108:113-8 [PubMed]
Rutishauser U, Ross IB, Mamelak AN, Schuman EM (2010) Human memory strength is predicted by theta-frequency phase-locking of single neurons. Nature 464:903-7 [Journal] [PubMed]
Sargolini F, Fyhn M, Hafting T, McNaughton BL, Witter MP, Moser MB, Moser EI (2006) Conjunctive representation of position, direction, and velocity in entorhinal cortex. Science 312:758-62 [Journal] [PubMed]
Savelli F, Knierim JJ (2010) Hebbian analysis of the transformation of medial entorhinal grid-cell inputs to hippocampal place fields. J Neurophysiol 103:3167-83 [Journal] [PubMed]
Savelli F, Yoganarasimha D, Knierim JJ (2008) Influence of boundary removal on the spatial representations of the medial entorhinal cortex. Hippocampus 18:1270-82 [Journal] [PubMed]
Sharp PE, Koester K (2008) Lesions of the mammillary body region severely disrupt the cortical head direction, but not place cell signal. Hippocampus 18:766-84 [Journal] [PubMed]
Skaggs WE, Knierim JJ, Kudrimoti HS, McNaughton BL (1995) A model of the neural basis of the rat's sense of direction. Adv Neural Inf Process Syst 7:173-80 [PubMed]
Skaggs WE, Mcnaughton BL, Gothard KM, Markus EJ (1993) An information-theoretic approach to deciphering the hippocampal code Adv Neural Inf Process Syst 5:1030-1037
Solstad T, Boccara CN, Kropff E, Moser MB, Moser EI (2008) Representation of geometric borders in the entorhinal cortex. Science 322:1865-8 [Journal] [PubMed]
Solstad T, Moser EI, Einevoll GT (2006) From grid cells to place cells: a mathematical model. Hippocampus 16:1026-31 [Journal] [PubMed]
Song P, Wang XJ (2005) Angular path integration by moving "hill of activity": a spiking neuron model without recurrent excitation of the head-direction system. J Neurosci 25:1002-14 [Journal] [PubMed]
Squire LR, Schacter DL (2002) Neuropsychology of memory, Ed 3
Taube JS (2007) The head direction signal: origins and sensory-motor integration. Annu Rev Neurosci 30:181-207 [Journal] [PubMed]
Taube JS, Muller RU, Ranck JB (1990) Head-direction cells recorded from the postsubiculum in freely moving rats. II. Effects of environmental manipulations. J Neurosci 10:436-47 [PubMed]
Tiesinga P, Fellous JM, Sejnowski TJ (2008) Regulation of spike timing in visual cortical circuits. Nat Rev Neurosci 9:97-107 [Journal] [PubMed]
Tsanov M, Chah E, Vann SD, Reilly RB, Erichsen JT, Aggleton JP, O'Mara SM (2011) Theta-modulated head direction cells in the rat anterior thalamus. J Neurosci 31:9489-502 [Journal] [PubMed]
Tsanov M, Chah E, Wright N, Vann SD, Reilly R, Erichsen JT, Aggleton JP, O'Mara SM (2011) Oscillatory entrainment of thalamic neurons by theta rhythm in freely moving rats. J Neurophysiol 105:4-17 [Journal] [PubMed]
Uebachs M, Opitz T, Royeck M, Dickhof G, Horstmann MT, Isom LL, Beck H (2010) Efficacy loss of the anticonvulsant carbamazepine in mice lacking sodium channel beta subunits via paradoxical effects on persistent sodium currents. J Neurosci 30:8489-501 [Journal] [PubMed]
   CA1 pyramidal neuron to study INaP properties and repetitive firing (Uebachs et al. 2010) [Model]
Van Cauter T, Poucet B, Save E (2008) Unstable CA1 place cell representation in rats with entorhinal cortex lesions. Eur J Neurosci 27:1933-46 [Journal] [PubMed]
Vann SD, Aggleton JP (2004) The mammillary bodies: two memory systems in one? Nat Rev Neurosci 5:35-44 [Journal] [PubMed]
Vertes RP, Kocsis B (1997) Brainstem-diencephalo-septohippocampal systems controlling the theta rhythm of the hippocampus. Neuroscience 81:893-926 [PubMed]
Wills TJ, Cacucci F, Burgess N, O'Keefe J (2010) Development of the hippocampal cognitive map in preweanling rats. Science 328:1573-6 [Journal] [PubMed]
Zhang K (1996) Representation of spatial orientation by the intrinsic dynamics of the head-direction cell ensemble: a theory. J Neurosci 16:2112-26 [PubMed]
Zilli EA, Hasselmo ME (2010) Coupled Noisy Spiking Neurons as Velocity-Controlled Oscillators in a Model of Grid Cell Spatial Firing J. Neurosci. 30(41):13850-13860 [Journal]
   Grid cell oscillatory interference with noisy network oscillators (Zilli and Hasselmo 2010) [Model]
Zilli EA, Yoshida M, Tahvildari B, Giocomo LM, Hasselmo ME (2009) Evaluation of the oscillatory interference model of grid cell firing through analysis and measured period variance of some biological oscillators. PLoS Comput Biol 5:e1000573 [Journal] [PubMed]
Bush D, Burgess N (2020) Advantages and detection of phase coding in the absence of rhythmicity. Hippocampus [Journal] [PubMed]
   Decoding movement trajectory from simulated grid cell population activity (Bush & Burgess 2019) [Model]
Schmidt-Hieber C, Häusser M (2013) Cellular mechanisms of spatial navigation in the medial entorhinal cortex. Nat Neurosci 16:325-31 [Journal] [PubMed]
   MEC layer II stellate cell: Synaptic mechanisms of grid cells (Schmidt-Hieber & Hausser 2013) [Model]
Zilli EA (2012) Models of grid cell spatial firing published 2005-2011. Front Neural Circuits 6:16 [Journal] [PubMed]
   Grid cell spatial firing models (Zilli 2012) [Model]
(92 refs)