Citations for Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)

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Destexhe A, Rudolph M, Fellous JM, Sejnowski TJ (2001) Fluctuating synaptic conductances recreate in vivo-like activity in neocortical neurons. Neuroscience 107:13-24 [PubMed]

References and models cited by this paper

References and models that cite this paper

Barrett JN (1975) Motoneuron dendrites: role in synaptic integration. Fed Proc 34:1398-407 [PubMed]
Bernander O, Douglas RJ, Martin KA, Koch C (1991) Synaptic background activity influences spatiotemporal integration in single pyramidal cells. Proc Natl Acad Sci U S A 88:11569-73 [PubMed]
Borg-Graham LJ, Monier C, Frégnac Y (1998) Visual input evokes transient and strong shunting inhibition in visual cortical neurons. Nature 393:369-73 [Journal] [PubMed]
Contreras D, Destexhe A, Steriade M (1997) Intracellular and computational characterization of the intracortical inhibitory control of synchronized thalamic inputs in vivo. J Neurophysiol 78:335-50 [Journal] [PubMed]
Cragg BG (1967) The density of synapses and neurones in the motor and visual areas of the cerebral cortex. J Anat 101:639-54 [PubMed]
DeFelipe J, Fariñas I (1992) The pyramidal neuron of the cerebral cortex: morphological and chemical characteristics of the synaptic inputs. Prog Neurobiol 39:563-607 [PubMed]
Destexhe A, Paré D (1999) Impact of network activity on the integrative properties of neocortical pyramidal neurons in vivo. J Neurophysiol 81:1531-47 [Journal] [PubMed]
Douglas RJ, Martin KA, Whitteridge D (1991) An intracellular analysis of the visual responses of neurones in cat visual cortex. J Physiol 440:659-96 [PubMed]
Fellous JM, Houweling AR, Modi RH, Rao RP, Tiesinga PH, Sejnowski TJ (2001) Frequency dependence of spike timing reliability in cortical pyramidal cells and interneurons. J Neurophysiol 85:1782-7 [Journal] [PubMed]
Feng J, Brown D (2000) Impact of correlated inputs on the output of the integrate- and-fire model. Neural Comput 12:671-92 [PubMed]
Harsch A, Robinson HP (2000) Postsynaptic variability of firing in rat cortical neurons: the roles of input synchronization and synaptic NMDA receptor conductance. J Neurosci 20:6181-92 [PubMed]
Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed]
Hô N, Destexhe A (2000) Synaptic background activity enhances the responsiveness of neocortical pyramidal neurons. J Neurophysiol 84:1488-96 [Journal] [PubMed]
Holmes WR, Woody CD (1989) Effects of uniform and non-uniform synaptic 'activation-distributions' on the cable properties of modeled cortical pyramidal neurons. Brain Res 505:12-22 [PubMed]
Mainen ZF, Sejnowski TJ (1995) Reliability of spike timing in neocortical neurons. Science 268:1503-6 [PubMed]
Matsumura M, Cope T, Fetz EE (1988) Sustained excitatory synaptic input to motor cortex neurons in awake animals revealed by intracellular recording of membrane potentials. Exp Brain Res 70:463-9 [PubMed]
McCormick DA (1992) Neurotransmitter actions in the thalamus and cerebral cortex and their role in neuromodulation of thalamocortical activity. Prog Neurobiol 39:337-88 [PubMed]
McCormick DA, Wang Z, Huguenard J (1993) Neurotransmitter control of neocortical neuronal activity and excitability. Cereb Cortex 3:387-98 [PubMed]
Paré D, Lebel E, Lang EJ (1997) Differential impact of miniature synaptic potentials on the soma and dendrites of pyramidal neurons in vivo. J Neurophysiol 78:1735-9 [Journal] [PubMed]
Paré D, Shink E, Gaudreau H, Destexhe A, Lang EJ (1998) Impact of spontaneous synaptic activity on the resting properties of cat neocortical pyramidal neurons In vivo. J Neurophysiol 79:1450-60 [Journal] [PubMed]
Ricciardi LM, Sacerdote L (1979) The Ornstein-Uhlenbeck process as a model for neuronal activity. I. Mean and variance of the firing time. Biol Cybern 35:1-9 [PubMed]
Salinas E, Sejnowski TJ (2000) Impact of correlated synaptic input on output firing rate and variability in simple neuronal models. J Neurosci 20:6193-209 [PubMed]
Shadlen MN, Newsome WT (1998) The variable discharge of cortical neurons: implications for connectivity, computation, and information coding. J Neurosci 18:3870-96 [Journal] [PubMed]
Sharp AA, O'Neil MB, Abbott LF, Marder E (1993) The dynamic clamp: artificial conductances in biological neurons. Trends Neurosci 16:389-94 [PubMed]
Smith CE (1992) A note on neuronal firing and input variability. J Theor Biol 154:271-5 [PubMed]
Softky WR, Koch C (1993) The highly irregular firing of cortical cells is inconsistent with temporal integration of random EPSPs. J Neurosci 13:334-50 [PubMed]
Stevens CF, Zador AM (1998) Input synchrony and the irregular firing of cortical neurons. Nat Neurosci 1:210-7 [Journal] [PubMed]
Svirskis G, Rinzel J (2000) Influence of temporal correlation of synaptic input on the rate and variability of firing in neurons. Biophys J 79:629-37 [Journal] [PubMed]
Wiesenfeld K, Moss F (1995) Stochastic resonance and the benefits of noise: from ice ages to crayfish and SQUIDs. Nature 373:33-6 [Journal] [PubMed]
Anderson WD, Makadia HK, Vadigepalli R (2016) Molecular variability elicits a tunable switch with discrete neuromodulatory response phenotypes. J Comput Neurosci 40:65-82 [Journal] [PubMed]
   Cell signaling/ion channel variability effects on neuronal response (Anderson, Makadia, et al. 2015) [Model]
Aradi I, Santhakumar V, Chen K, Soltesz I (2002) Postsynaptic effects of GABAergic synaptic diversity: regulation of neuronal excitability by changes in IPSC variance. Neuropharmacology 43:511-22 [PubMed]
Arsiero M, Lüscher HR, Lundstrom BN, Giugliano M (2007) The impact of input fluctuations on the frequency-current relationships of layer 5 pyramidal neurons in the rat medial prefrontal cortex. J Neurosci 27:3274-84 [Journal] [PubMed]
   Input Fluctuations effects on f-I curves (Arsiero et al. 2007) [Model]
Azouz R (2005) Dynamic spatiotemporal synaptic integration in cortical neurons: neuronal gain, revisited. J Neurophysiol 94:2785-96 [Journal] [PubMed]
Badel L, Lefort S, Brette R, Petersen CC, Gerstner W, Richardson MJ (2008) Dynamic I-V curves are reliable predictors of naturalistic pyramidal-neuron voltage traces. J Neurophysiol 99:656-66 [Journal] [PubMed]
Behuret S, Deleuze C, Gomez L, Fregnac Y and Bal T (2013) Cortically-controlled population stochastic facilitation as a plausible substrate for guiding sensory transfer across the thalamic gateway PLoS Computational Biology 9(12):e1003401 [Journal]
   A Model Circuit of Thalamocortical Convergence (Behuret et al. 2013) [Model]
Birdno MJ, Kuncel AM, Dorval AD, Turner DA, Gross RE, Grill WM (2012) Stimulus features underlying reduced tremor suppression with temporally patterned deep brain stimulation. J Neurophysiol 107:364-83 [Journal] [PubMed]
   Thalamic network model of deep brain stimulation in essential tremor (Birdno et al. 2012) [Model]
Booth V, Poe GR (2006) Input source and strength influences overall firing phase of model hippocampal CA1 pyramidal cells during theta: relevance to REM sleep reactivation and memory consolidation. Hippocampus 16:161-73 [Journal] [PubMed]
Breakspear M, Terry JR, Friston KJ (2003) Modulation of excitatory synaptic coupling facilitates synchronization and complex dynamics in a biophysical model of neuronal dynamics. Network 14:703-32 [Journal] [PubMed]
Brette R (2006) Exact simulation of integrate-and-fire models with synaptic conductances. Neural Comput 18:2004-27 [Journal] [PubMed]
Brette R, Gerstner W (2005) Adaptive exponential integrate-and-fire model as an effective description of neuronal activity. J Neurophysiol 94:3637-42 [Journal] [PubMed]
   Adaptive exponential integrate-and-fire model (Brette & Gerstner 2005) [Model]
Carnevale NT, Morse TM (1996-2009) Research reports that have used NEURON Web published citations at the NEURON website [Journal]
Cavallari S, Panzeri S, Mazzoni A (2014) Comparison of the dynamics of neural interactions between current-based and conductance-based integrate-and-fire recurrent networks. Front Neural Circuits 8:12 [Journal] [PubMed]
   I&F recurrent networks with current- or conductance-based synapses (Cavallari et al. 2014) [Model]
Cavarretta F, Marasco A, Hines ML, Shepherd GM, Migliore M (2016) Glomerular and Mitral-Granule Cell Microcircuits Coordinate Temporal and Spatial Information Processing in the Olfactory Bulb. Front Comput Neurosci 10:67 [Journal] [PubMed]
   Parallel odor processing by mitral and middle tufted cells in the OB (Cavarretta et al 2016, 2018) [Model]
Chambers JD, Bethwaite B, Diamond NT, Peachey T, Abramson D, Petrou S, Thomas EA (2012) Parametric computation predicts a multiplicative interaction between synaptic strength parameters that control gamma oscillations. Front Comput Neurosci 6:53 [Journal] [PubMed]
   Parametric computation and persistent gamma in a cortical model (Chambers et al. 2012) [Model]
Chance FS (2007) Receiver operating characteristic (ROC) analysis for characterizing synaptic efficacy. J Neurophysiol 97:1799-808 [Journal] [PubMed]
Chance FS, Abbott LF, Reyes AD (2002) Gain modulation from background synaptic input. Neuron 35:773-82 [PubMed]
Debay D, Wolfart J, Le Franc Y, Le Masson G, Bal T (2004) Exploring spike transfer through the thalamus using hybrid artificial-biological neuronal networks. J Physiol Paris 98:540-58 [Journal] [PubMed]
Desai NS, Walcott EC (2006) Synaptic bombardment modulates muscarinic effects in forelimb motor cortex. J Neurosci 26:2215-26 [Journal] [PubMed]
Destexhe A, Badoual M, Piwkowska Z, Bal T, Rudolph M (2004) A novel method for characterizing synaptic noise in cortical neurons Neurocomputing 58:191-196
Destexhe A, Rudolph M (2004) Extracting information from the power spectrum of synaptic noise. J Comput Neurosci 17:327-45 [Journal] [PubMed]
Destexhe A, Rudolph M, Paré D (2003) The high-conductance state of neocortical neurons in vivo. Nat Rev Neurosci 4:739-51 [Journal] [PubMed]
Fellous JM, Rudolph M, Destexhe A, Sejnowski TJ (2003) Synaptic background noise controls the input/output characteristics of single cells in an in vitro model of in vivo activity. Neuroscience 122:811-29 [PubMed]
Földy C, Aradi I, Howard A, Soltesz I (2004) Diversity beyond variance: modulation of firing rates and network coherence by GABAergic subpopulations. Eur J Neurosci 19:119-30 [PubMed]
Gasparini S, Migliore M, Magee JC (2004) On the initiation and propagation of dendritic spikes in CA1 pyramidal neurons. J Neurosci 24:11046-56 [Journal] [PubMed]
   CA1 pyramidal neuron: dendritic spike initiation (Gasparini et al 2004) [Model]
Gutkin B, Ermentrout GB, Rudolph M (2003) Spike generating dynamics and the conditions for spike-time precision in cortical neurons. J Comput Neurosci 15:91-103 [Journal] [PubMed]
Haeusler S, Maass W (2007) A statistical analysis of information-processing properties of lamina-specific cortical microcircuit models. Cereb Cortex 17:149-62 [Journal] [PubMed]
   Information-processing in lamina-specific cortical microcircuits (Haeusler and Maass 2006) [Model]
Higley MJ, Contreras D (2006) Balanced excitation and inhibition determine spike timing during frequency adaptation. J Neurosci 26:448-57 [Journal] [PubMed]
Hines ML, Carnevale NT (2003) Personal Communication of NEURON bibliography
Hoch T, Wenning G, Obermayer K (2003) Optimal noise-aided signal transmission through populations of neurons. Phys Rev E Stat Nonlin Soft Matter Phys 68:011911 [Journal] [PubMed]
Hong S, Ratté S, Prescott SA, De Schutter E (2012) Single neuron firing properties impact correlation-based population coding. J Neurosci 32:1413-28 [Journal] [PubMed]
   A model for how correlation depends on the neuronal excitability type (Hong et al. 2012) [Model]
Jolivet R, Lewis TJ, Gerstner W (2004) Generalized integrate-and-fire models of neuronal activity approximate spike trains of a detailed model to a high degree of accuracy. J Neurophysiol 92:959-76 [Journal] [PubMed]
   Spike Response Model simulator (Jolivet et al. 2004, 2006, 2008) [Model]
Kitano K, Fukai T (2007) Variability v.s. synchronicity of neuronal activity in local cortical network models with different wiring topologies. J Comput Neurosci 23:237-50 [Journal] [PubMed]
Köndgen H, Geisler C, Fusi S, Wang XJ, Lüscher HR, Giugliano M (2008) The dynamical response properties of neocortical neurons to temporally modulated noisy inputs in vitro. Cereb Cortex 18:2086-97 [Journal] [PubMed]
   Response properties of neocort. neurons to temporally modulated noisy inputs (Koendgen et al. 2008) [Model]
La Camera G, Rauch A, Lüscher HR, Senn W, Fusi S (2004) Minimal models of adapted neuronal response to in vivo-like input currents. Neural Comput 16:2101-24 [Journal] [PubMed]
Legenstein R, Pecevski D, Maass W (2008) A learning theory for reward-modulated spike-timing-dependent plasticity with application to biofeedback. PLoS Comput Biol 4:e1000180 [Journal] [PubMed]
   Reward modulated STDP (Legenstein et al. 2008) [Model]
Linaro D, Couto J, Giugliano M (2014) Command-line cellular electrophysiology for conventional and real-time closed-loop experiments. J Neurosci Methods 230:5-19 [Journal] [PubMed]
   Phase response curves firing rate dependency of rat purkinje neurons in vitro (Couto et al 2015) [Model]
Lundstrom BN, Famulare M, Sorensen LB, Spain WJ, Fairhall AL (2009) Sensitivity of firing rate to input fluctuations depends on time scale separation between fast and slow variables in single neurons J Comput Neurosci [Journal]
   Hodgkin-Huxley simplifed 2D and 3D models (Lundstrom et al. 2009) [Model]
Maass W, Joshi P, Sontag ED (2007) Computational aspects of feedback in neural circuits. PLoS Comput Biol 3:e165 [Journal] [PubMed]
   Computational aspects of feedback in neural circuits (Maass et al 2006) [Model]
Martínez L, Pérez T, Mirasso CR, Manjarrez E (2007) Stochastic resonance in the motor system: effects of noise on the monosynaptic reflex pathway of the cat spinal cord. J Neurophysiol 97:4007-16 [Journal] [PubMed]
Meffin H, Burkitt AN, Grayden DB (2004) An analytical model for the "large, fluctuating synaptic conductance state" typical of neocortical neurons in vivo. J Comput Neurosci 16:159-75 [Journal] [PubMed]
Migliore M, De Blasi I, Tegolo D, Migliore R (2011) A modeling study suggesting how a reduction in the context-dependent input on CA1 pyramidal neurons could generate schizophrenic behavior. Neural Netw 24:552-9 [Journal] [PubMed]
   CA1 pyramidal neuron: schizophrenic behavior (Migliore et al. 2011) [Model]
Migliore R, De Simone G, Leinekugel X, Migliore M (2017) The possible consequences for cognitive functions of external electric fields at power line frequency on hippocampal CA1 pyramidal neurons. Eur J Neurosci 45:1024-1031 [Journal] [PubMed]
   Effects of electric fields on cognitive functions (Migliore et al 2016) [Model]
Morse TM (2008) ModelDB in computational neuroscience education - a research tool as interactive educational media. Brains Minds Media, Lorenz S, Egelhaaf M, ed. pp.bmm1409 [Journal] [PubMed]
Muller E, Buesing L, Schemmel J, Meier K (2007) Spike-frequency adapting neural ensembles: beyond mean adaptation and renewal theories. Neural Comput 19:2958-3010 [Journal] [PubMed]
Murphy BK, Miller KD (2003) Multiplicative gain changes are induced by excitation or inhibition alone. J Neurosci 23:10040-51 [PubMed]
Ozer M, Graham LJ, Erkaymaz O, Uzuntarla M (2007) Impact of synaptic noise and conductance state on spontaneous cortical firing. Neuroreport 18:1371-4 [Journal] [PubMed]
Palmer SE, Miller KD (2007) Effects of inhibitory gain and conductance fluctuations in a simple model for contrast-invariant orientation tuning in cat V1. J Neurophysiol 98:63-78 [Journal] [PubMed]
Platkiewicz J, Brette R (2010) A threshold equation for action potential initiation. PLoS Comput Biol 6:e1000850 [Journal] [PubMed]
   A threshold equation for action potential initiation (Platkiewicz & Brette 2010) [Model]
Platkiewicz J, Brette R (2011) Impact of fast sodium channel inactivation on spike threshold dynamics and synaptic integration. PLoS Comput Biol 7:e1001129 [Journal] [PubMed]
   Impact of fast Na channel inact. on AP threshold & synaptic integration (Platkiewicz & Brette 2011) [Model]
Pospischil M, Piwkowska Z, Rudolph M, Bal T, Destexhe A (2007) Calculating event-triggered average synaptic conductances from the membrane potential. J Neurophysiol 97:2544-52 [Journal] [PubMed]
   Code to calc. spike-trig. ave (STA) conduct. from Vm (Pospischil et al. 2007, Rudolph et al. 2007) [Model]
Powers RK, Elbasiouny SM, Rymer WZ, Heckman CJ (2012) Contribution of intrinsic properties and synaptic inputs to motoneuron discharge patterns: a simulation study. J Neurophysiol 107:808-23 [Journal] [PubMed]
   Simulations of motor unit discharge patterns (Powers et al. 2011) [Model]
Powers RK, Heckman CJ (2015) Contribution of intrinsic motoneuron properties to discharge hysteresis and its estimation based on paired motor unit recordings: a simulation study. J Neurophysiol 114:184-98 [Journal] [PubMed]
   Discharge hysteresis in motoneurons (Powers & Heckman 2015) [Model]
Powers RK, Heckman CJ (2017) Synaptic control of the shape of the motoneuron pool input-output function. J Neurophysiol 117:1171-1184 [Journal] [PubMed]
   Motoneuron pool input-output function (Powers & Heckman 2017) [Model]
Prescott SA, De Koninck Y (2003) Gain control of firing rate by shunting inhibition: roles of synaptic noise and dendritic saturation. Proc Natl Acad Sci U S A 100:2076-81 [Journal] [PubMed]
Prescott SA, Ratté S, De Koninck Y, Sejnowski TJ (2006) Nonlinear interaction between shunting and adaptation controls a switch between integration and coincidence detection in pyramidal neurons. J Neurosci 26:9084-97 [Journal] [PubMed]
Prescott SA, Ratté S, De Koninck Y, Sejnowski TJ (2008) Pyramidal neurons switch from integrators in vitro to resonators under in vivo-like conditions. J Neurophysiol 100:3030-42 [Journal] [PubMed]
   Pyramidal neurons switch from integrators to resonators (Prescott et al. 2008) [Model]
Reinker S, Puil E, Miura RM (2004) Membrane resonance and stochastic resonance modulate firing patterns of thalamocortical neurons. J Comput Neurosci 16:15-25 [PubMed]
Richardson MJ, Gerstner W (2005) Synaptic shot noise and conductance fluctuations affect the membrane voltage with equal significance. Neural Comput 17:923-47 [Journal] [PubMed]
Rössert C, Solinas S, D'Angelo E, Dean P, Porrill J (2014) Model cerebellar granule cells can faithfully transmit modulated firing rate signals. Front Cell Neurosci 8:304 [Journal] [PubMed]
   Information transmission in cerebellar granule cell models (Rossert et al. 2014) [Model]
Rowat P (2007) Interspike interval statistics in the stochastic Hodgkin-Huxley model: coexistence of gamma frequency bursts and highly irregular firing. Neural Comput 19:1215-50 [Journal] [PubMed]
Rudolph M, Destexhe A (2002) Point-conductance models of cortical neurons with high discharge variability Neurocomputing 44-46:147-152
Rudolph M, Destexhe A (2003) Characterization of subthreshold voltage fluctuations in neuronal membranes. Neural Comput 15:2577-618 [Journal] [PubMed]
Rudolph M, Destexhe A (2003) A fast-conducting, stochastic integrative mode for neocortical neurons in vivo. J Neurosci 23:2466-76 [PubMed]
Rudolph M, Destexhe A (2003) The discharge variability of neocortical neurons during high-conductance states. Neuroscience 119:855-73 [PubMed]
Rudolph M, Destexhe A (2004) Inferring network activity from synaptic noise. J Physiol Paris 98:452-66 [Journal] [PubMed]
Rudolph M, Destexhe A (2005) An extended analytic expression for the membrane potential distribution of conductance-based synaptic noise. Neural Comput 17:2301-15 [Journal] [PubMed]
   Steady-state Vm distribution of neurons subject to synaptic noise (Rudolph, Destexhe 2005) [Model]
Rudolph M, Destexhe A (2006) On the use of analytical expressions for the voltage distribution to analyze intracellular recordings. Neural Comput 18:2917-22 [Journal] [PubMed]
Rudolph M, Destexhe A (2006) Analytical integrate-and-fire neuron models with conductance-based dynamics for event-driven simulation strategies. Neural Comput 18:2146-210 [Journal] [PubMed]
Rudolph M, Pelletier JG, Pare D, Destexhe A (2004) Estimation of synaptic conductances and their variances from intracellular recordings of neocortical neurons in vivo Neurocomputing 58:387-392
Rudolph M, Pospischil M, Timofeev I, Destexhe A (2007) Inhibition determines membrane potential dynamics and controls action potential generation in awake and sleeping cat cortex. J Neurosci 27:5280-90 [Journal] [PubMed]
   Code to calc. spike-trig. ave (STA) conduct. from Vm (Pospischil et al. 2007, Rudolph et al. 2007) [Model]
Santhakumar V, Aradi I, Soltesz I (2005) Role of mossy fiber sprouting and mossy cell loss in hyperexcitability: a network model of the dentate gyrus incorporating cell types and axonal topography. J Neurophysiol 93:437-53 [Journal] [PubMed]
   Dentate gyrus network model (Santhakumar et al 2005) [Model]
   Dentate gyrus (Morgan et al. 2007, 2008, Santhakumar et al. 2005, Dyhrfjeld-Johnsen et al. 2007) [Model]
Shu Y, Duque A, Yu Y, Haider B, McCormick DA (2007) Properties of action-potential initiation in neocortical pyramidal cells: evidence from whole cell axon recordings. J Neurophysiol 97:746-60 [Journal] [PubMed]
   Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007) [Model]
Spera E, Migliore M, Unsworth N, Tegolo D (2016) On the cellular mechanisms underlying working memory capacity in humans Neural Network World 4:335-359 [Journal]
   Model of CA1 activity during working memory task (Spera et al. 2016) [Model]
Stiefel KM, Englitz B, Sejnowski TJ (2013) Origin of intrinsic irregular firing in cortical interneurons. Proc Natl Acad Sci U S A 110:7886-91 [Journal] [PubMed]
Thomas EA, Petrou S (2013) Network-specific mechanisms may explain the paradoxical effects of carbamazepine and phenytoin. Epilepsia 54:1195-202 [Journal] [PubMed]
   State dependent drug binding to sodium channels in the dentate gyrus (Thomas & Petrou 2013) [Model]
Tiesinga PH (2005) Stimulus competition by inhibitory interference. Neural Comput 17:2421-53 [Journal] [PubMed]
Tiesinga PH, Fellous JM, José JV, Sejnowski TJ (2002) Information transfer in entrained cortical neurons. Network 13:41-66 [PubMed]
Vierling-Claassen D, Cardin JA, Moore CI, Jones SR (2010) Computational modeling of distinct neocortical oscillations driven by cell-type selective optogenetic drive: separable resonant circuits controlled by low-threshold spiking and fast-spiking interneurons. Front Hum Neurosci 4:198 [Journal] [PubMed]
   Engaging distinct oscillatory neocortical circuits (Vierling-Claassen et al. 2010) [Model]
Wenning G, Obermayer K (2003) Activity driven adaptive stochastic resonance. Phys Rev Lett 90:120602 [Journal] [PubMed]
Wolfart J, Debay D, Le Masson G, Destexhe A, Bal T (2005) Synaptic background activity controls spike transfer from thalamus to cortex. Nat Neurosci 8:1760-7 [Journal] [PubMed]
Wong KF, Wang XJ (2006) A recurrent network mechanism of time integration in perceptual decisions. J Neurosci 26:1314-28 [Journal] [PubMed]
Yu Y, Shu Y, McCormick DA (2008) Cortical action potential backpropagation explains spike threshold variability and rapid-onset kinetics. J Neurosci 28:7260-72 [Journal] [PubMed]
   AP back-prop. explains threshold variability and rapid rise (McCormick et al. 2007, Yu et al. 2008) [Model]
(121 refs)

Destexhe A, Neubig M, Ulrich D, Huguenard J (1998) Dendritic low-threshold calcium currents in thalamic relay cells. J Neurosci 18:3574-88 [PubMed]

References and models cited by this paper

References and models that cite this paper

ANDERSEN P, ECCLES J (1962) Inhibitory phasing of neuronal discharge. Nature 196:645-7 [PubMed]
ANDERSEN P, RUDJORD T (1964) SIMULATION OF A NEURONAL NETWORK OPERATING RHYTHMICALLY THROUGH RECURRENT INHIBITION. Nature 204:289-90 [PubMed]
Bal T, von Krosigk M, McCormick DA (1995) Synaptic and membrane mechanisms underlying synchronized oscillations in the ferret lateral geniculate nucleus in vitro. J Physiol 483 ( Pt 3):641-63 [PubMed]
Bal T, von Krosigk M, McCormick DA (1995) Role of the ferret perigeniculate nucleus in the generation of synchronized oscillations in vitro. J Physiol 483 ( Pt 3):665-85 [PubMed]
Bloomfield SA, Hamos JE, Sherman SM (1987) Passive cable properties and morphological correlates of neurones in the lateral geniculate nucleus of the cat. J Physiol 383:653-92 [PubMed]
Bush PC, Sejnowski TJ (1993) Reduced compartmental models of neocortical pyramidal cells. J Neurosci Methods 46:159-66 [PubMed]
Contreras D, Curró Dossi R, Steriade M (1993) Electrophysiological properties of cat reticular thalamic neurones in vivo. J Physiol 470:273-94 [PubMed]
Coulter DA, Huguenard JR, Prince DA (1989) Calcium currents in rat thalamocortical relay neurones: kinetic properties of the transient, low-threshold current. J Physiol 414:587-604 [PubMed]
Crunelli V, Leresche N, Parnavelas JG (1987) Membrane properties of morphologically identified X and Y cells in the lateral geniculate nucleus of the cat in vitro. J Physiol 390:243-56 [PubMed]
Deschênes M, Paradis M, Roy JP, Steriade M (1984) Electrophysiology of neurons of lateral thalamic nuclei in cat: resting properties and burst discharges. J Neurophysiol 51:1196-219 [Journal] [PubMed]
Destexhe A, Contreras D, Steriade M (1998) Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. J Neurophysiol 79:999-1016 [Journal] [PubMed]
   Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]
Destexhe A, Contreras D, Steriade M, Sejnowski TJ, Huguenard JR (1996) In vivo, in vitro, and computational analysis of dendritic calcium currents in thalamic reticular neurons. J Neurosci 16:169-85 [Journal] [PubMed]
   Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996) [Model]
Destexhe A, McCormick DA, Sejnowski TJ (1993) A model for 8-10 Hz spindling in interconnected thalamic relay and reticularis neurons. Biophys J 65:2473-7 [Journal] [PubMed]
Destexhe A, Sejnowski TJ (1997) Synchronized oscillations in thalamic networks: insights from modeling studies Thalamus, Steriade M:Jones EG:Mccormick DA, ed. pp.331
Erisir A, Van Horn SC, Bickford ME, Sherman SM (1997) Immunocytochemistry and distribution of parabrachial terminals in the lateral geniculate nucleus of the cat: a comparison with corticogeniculate terminals. J Comp Neurol 377:535-49 [PubMed]
Golomb D, Wang XJ, Rinzel J (1996) Propagation of spindle waves in a thalamic slice model. J Neurophysiol 75:750-69 [Journal] [PubMed]
Hille B (1992) Potassium channels and chloride channels Ionic Channels of Excitable Membrane, Hille B, ed. pp.115
Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed]
Huguenard JR (1998) Heterogeneity of LVA calcium currents in thalamic neurons and their functional rolein burst firing Low Voltage Activated T-type Calcium Channels, Tsien RW:Nargeot J, ed. pp.143
Huguenard JR, Hamill OP, Prince DA (1988) Developmental changes in Na+ conductances in rat neocortical neurons: appearance of a slowly inactivating component. J Neurophysiol 59:778-95 [Journal] [PubMed]
Huguenard JR, McCormick DA (1992) Simulation of the currents involved in rhythmic oscillations in thalamic relay neurons. J Neurophysiol 68:1373-83 [Journal] [PubMed]
Huguenard JR, Prince DA (1992) A novel T-type current underlies prolonged Ca(2+)-dependent burst firing in GABAergic neurons of rat thalamic reticular nucleus. J Neurosci 12:3804-17 [PubMed]
Jahnsen H, Llinás R (1984) Ionic basis for the electro-responsiveness and oscillatory properties of guinea-pig thalamic neurones in vitro. J Physiol 349:227-47 [PubMed]
Jahnsen H, Llinás R (1984) Electrophysiological properties of guinea-pig thalamic neurones: an in vitro study. J Physiol 349:205-26 [PubMed]
Karst H, Joëls M, Wadman WJ (1993) Low-threshold calcium current in dendrites of the adult rat hippocampus. Neurosci Lett 164:154-8 [PubMed]
Liu XB, Honda CN, Jones EG (1995) Distribution of four types of synapse on physiologically identified relay neurons in the ventral posterior thalamic nucleus of the cat. J Comp Neurol 352:69-91 [Journal] [PubMed]
Magee JC, Johnston D (1995) Characterization of single voltage-gated Na+ and Ca2+ channels in apical dendrites of rat CA1 pyramidal neurons. J Physiol 487:67-90 [PubMed]
McCormick DA (1992) Neurotransmitter actions in the thalamus and cerebral cortex and their role in neuromodulation of thalamocortical activity. Prog Neurobiol 39:337-88 [PubMed]
McCormick DA, Huguenard JR (1992) A model of the electrophysiological properties of thalamocortical relay neurons. J Neurophysiol 68:1384-400 [Journal] [PubMed]
Müller W, Lux HD (1993) Analysis of voltage-dependent membrane currents in spatially extended neurons from point-clamp data. J Neurophysiol 69:241-7 [Journal] [PubMed]
Munsch T, Budde T, Pape HC (1997) Voltage-activated intracellular calcium transients in thalamic relay cells and interneurons. Neuroreport 8:2411-8 [PubMed]
Neubig M, Destexhe A (1997) Construction of low-order computational models which accommodate spatial distributions of afferent synapses received by thalamocortical neurons Soc Neurosci Abstr 23:573
Ohara PT, Havton LA (1994) Dendritic architecture of rat somatosensory thalamocortical projection neurons. J Comp Neurol 341:159-71 [Journal] [PubMed]
Pape HC (1996) Queer current and pacemaker: the hyperpolarization-activated cation current in neurons. Annu Rev Physiol 58:299-327 [Journal] [PubMed]
Perez Velazquez JL, Carlen PL (1996) Development of firing patterns and electrical properties in neurons of the rat ventrobasal thalamus. Brain Res Dev Brain Res 91:164-70 [PubMed]
Pirchio M, Turner JP, Williams SR, Asprodini E, Crunelli V (1997) Postnatal development of membrane properties and delta oscillations in thalamocortical neurons of the cat dorsal lateral geniculate nucleus. J Neurosci 17:5428-44 [PubMed]
Press WH, Flannery BP, Teukolsky SA, Vetterling WT (1986) Numerical Recipes The Art Of Scientic Computing, University CAMBRIDGEPRESS, ed.
Rall W, Burke RE, Holmes WR, Jack JJ, Redman SJ, Segev I (1992) Matching dendritic neuron models to experimental data. Physiol Rev 72:S159-86 [Journal] [PubMed]
Steriade M, Deschenes M (1984) The thalamus as a neuronal oscillator. Brain Res 320:1-63 [PubMed]
Steriade M, Deschênes M, Domich L, Mulle C (1985) Abolition of spindle oscillations in thalamic neurons disconnected from nucleus reticularis thalami. J Neurophysiol 54:1473-97 [Journal] [PubMed]
Steriade M, Jones EG, Llinas RR (1990) Thalamic Oscillations And Signalling
Traub RD, Miles R (1991) Neuronal Networks Of The Hippocampus
Ulrich D, Huguenard JR (1995) Purinergic inhibition of GABA and glutamate release in the thalamus: implications for thalamic network activity. Neuron 15:909-18 [PubMed]
von Krosigk M, Bal T, McCormick DA (1993) Cellular mechanisms of a synchronized oscillation in the thalamus. Science 261:361-4 [PubMed]
Wang XJ, Golomb D, Rinzel J (1995) Emergent spindle oscillations and intermittent burst firing in a thalamic model: specific neuronal mechanisms. Proc Natl Acad Sci U S A 92:5577-81 [PubMed]
Warren RA, Jones EG (1997) Maturation of neuronal form and function in a mouse thalamo-cortical circuit. J Neurosci 17:277-95 [PubMed]
Zhou Q, Godwin DW, O'Malley DM, Adams PR (1997) Visualization of calcium influx through channels that shape the burst and tonic firing modes of thalamic relay cells. J Neurophysiol 77:2816-25 [Journal] [PubMed]
Allken V, Chepkoech JL, Einevoll GT, Halnes G (2014) The subcellular distribution of T-type Ca2+ channels in interneurons of the lateral geniculate nucleus. PLoS One 9:e107780 [Journal] [PubMed]
   The subcellular distribution of T-type Ca2+ channels in LGN interneurons (Allken et al. 2014) [Model]
Babadi B (2005) Bursting as an effective relay mode in a minimal thalamic model. J Comput Neurosci 18:229-43 [Journal] [PubMed]
Birdno MJ, Cooper SE, Rezai AR, Grill WM (2007) Pulse-to-pulse changes in the frequency of deep brain stimulation affect tremor and modeled neuronal activity. J Neurophysiol 98:1675-84 [Journal] [PubMed]
Birdno MJ, Kuncel AM, Dorval AD, Turner DA, Gross RE, Grill WM (2012) Stimulus features underlying reduced tremor suppression with temporally patterned deep brain stimulation. J Neurophysiol 107:364-83 [Journal] [PubMed]
   Thalamic network model of deep brain stimulation in essential tremor (Birdno et al. 2012) [Model]
Briska AM, Uhlrich DJ, Lytton WW (2000) Independent dendritic domains in the thalamic circuit Neurocomputing 32:299-305
Broicher T, Kanyshkova T, Landgraf P, Rankovic V, Meuth P, Meuth SG, Pape HC, Budde T (2007) Specific expression of low-voltage-activated calcium channel isoforms and splice variants in thalamic local circuit interneurons. Mol Cell Neurosci 36:132-45 [Journal] [PubMed]
Broicher T, Kanyshkova T, Meuth P, Pape HC, Budde T (2008) Correlation of T-channel coding gene expression, IT, and the low threshold Ca2+ spike in the thalamus of a rat model of absence epilepsy. Mol Cell Neurosci 39:384-99 [Journal] [PubMed]
Carlin KP, Jones KE, Jiang Z, Jordan LM, Brownstone RM (2000) Dendritic L-type calcium currents in mouse spinal motoneurons: implications for bistability. Eur J Neurosci 12:1635-46 [PubMed]
   Dendritic L-type Ca currents in motoneurons (Carlin et al 2000) [Model]
Carnevale NT, Morse TM (1996-2009) Research reports that have used NEURON Web published citations at the NEURON website [Journal]
Chemin J, Monteil A, Bourinet E, Nargeot J, Lory P (2001) Alternatively spliced alpha(1G) (Ca(V)3.1) intracellular loops promote specific T-type Ca(2+) channel gating properties. Biophys J 80:1238-50 [Journal] [PubMed]
Chemin J, Monteil A, Perez-Reyes E, Bourinet E, Nargeot J, Lory P (2002) Specific contribution of human T-type calcium channel isotypes (alpha(1G), alpha(1H) and alpha(1I)) to neuronal excitability. J Physiol 540:3-14 [Journal] [PubMed]
Chemin J, Monteil A, Perez-Reyes E, Nargeot J, Lory P (2001) Direct inhibition of T-type calcium channels by the endogenous cannabinoid anandamide. EMBO J 20:7033-40 [Journal] [PubMed]
Cleland TA, Sethupathy P (2006) Non-topographical contrast enhancement in the olfactory bulb. BMC Neurosci 7:7 [Journal] [PubMed]
Connelly WM, Crunelli V, Errington AC (2015) The Global Spike: Conserved Dendritic Properties Enable Unique Ca2+ Spike Generation in Low-Threshold Spiking Neurons. J Neurosci 35:15505-22 [Journal] [PubMed]
   Rat LGN Thalamocortical Neuron (Connelly et al 2015, 2016) [Model]
Destexhe A (2000) Modelling corticothalamic feedback and the gating of the thalamus by the cerebral cortex. J Physiol Paris 94:391-410 [PubMed]
Destexhe A, Contreras D, Steriade M (2001) LTS cells in cerebral cortex and their role in generating spike-and-wave oscillations. Neurocomputing 38:555-563 [Journal]
   Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]
Destexhe A, Huguenard JR (2000) Nonlinear thermodynamic models of voltage-dependent currents. J Comput Neurosci 9:259-70 [PubMed]
Destexhe A, Sejnowski TJ (2002) The initiation of bursts in thalamic neurons and the cortical control of thalamic sensitivity. Philos Trans R Soc Lond B Biol Sci 357:1649-57 [Journal] [PubMed]
Destexhe A, Sejnowski TJ (2003) Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiol Rev 83:1401-53 [Journal] [PubMed]
Doiron B, Noonan L, Lemon N, Turner RW (2003) Persistent Na+ current modifies burst discharge by regulating conditional backpropagation of dendritic spikes. J Neurophysiol 89:324-37 [Journal] [PubMed]
Forrest MD (2015) Simulation of alcohol action upon a detailed Purkinje neuron model and a simpler surrogate model that runs >400 times faster. BMC Neurosci 16:27 [Journal] [PubMed]
   Alcohol action in a detailed Purkinje neuron model and an efficient simplified model (Forrest 2015) [Model]
Grill WM, Simmons AM, Cooper SE, Miocinovic S, Montgomery EB, Baker KB, Rezai AR (2005) Temporal excitation properties of paresthesias evoked by thalamic microstimulation. Clin Neurophysiol 116:1227-34 [Journal] [PubMed]
Halnes G, Augustinaite S, Heggelund P, Einevoll GT, Migliore M (2011) A multi-compartment model for interneurons in the dorsal lateral geniculate nucleus. PLoS Comput Biol 7:e1002160 [Journal] [PubMed]
   A multi-compartment model for interneurons in the dLGN (Halnes et al. 2011) [Model]
Henderson D, Miller RF (2003) Evidence for low-voltage-activated (LVA) calcium currents in the dendrites of tiger salamander retinal ganglion cells. Vis Neurosci 20:141-52 [PubMed]
Henderson D, Miller RF (2007) Low-voltage activated calcium currents in ganglion cells of the tiger salamander retina: experiment and simulation. Vis Neurosci 24:37-51 [Journal] [PubMed]
Hendrickson EB, Edgerton JR, Jaeger D (2011) The capabilities and limitations of conductance-based compartmental neuron models with reduced branched or unbranched morphologies and active dendrites. J Comput Neurosci 30:301-21 [Journal] [PubMed]
   Comparison of full and reduced globus pallidus models (Hendrickson 2010) [Model]
Hines ML, Carnevale NT (2003) Personal Communication of NEURON bibliography
Huertas MA, Groff JR, Smith GD (2005) Feedback inhibition and throughput properties of an integrate-and-fire-or-burst network model of retinogeniculate transmission. J Comput Neurosci 19:147-80 [Journal] [PubMed]
Huertas MA, Smith GD (2006) A multivariate population density model of the dLGN/PGN relay. J Comput Neurosci 21:171-89 [Journal] [PubMed]
Kim JK, Fiorillo CD (2017) Theory of optimal balance predicts and explains the amplitude and decay time of synaptic inhibition. Nat Commun 8:14566 [Journal] [PubMed]
   Optimal balance predicts/explains amplitude and decay time of iPSGs (Kim & Fiorillo 2017) [Model]
Lawrence JJ, Saraga F, Churchill JF, Statland JM, Travis KE, Skinner FK, McBain CJ (2006) Somatodendritic Kv7/KCNQ/M channels control interspike interval in hippocampal interneurons. J Neurosci 26:12325-38 [Journal] [PubMed]
   O-LM interneuron model (Lawrence et al. 2006) [Model]
Le Franc Y, Le Masson G (2010) Multiple firing patterns in deep dorsal horn neurons of the spinal cord: computational analysis of mechanisms and functional implications. J Neurophysiol 104:1978-96 [Journal] [PubMed]
Lin RJ, Jaeger D (2011) Using computer simulations to determine the limitations of dynamic clamp stimuli applied at the soma in mimicking distributed conductance sources. J Neurophysiol 105:2610-24 [Journal] [PubMed]
Marasco A, Limongiello A, Migliore M (2012) Fast and accurate low-dimensional reduction of biophysically detailed neuron models. Sci Rep 2:928 [Journal] [PubMed]
   Ca1 pyramidal neuron: reduction model (Marasco et al. 2012) [Model]
Marasco A, Limongiello A, Migliore M (2013) Using Strahler's analysis to reduce up to 200-fold the run time of realistic neuron models. Sci Rep 3:2934 [Journal] [PubMed]
   Using Strahler`s analysis to reduce realistic models (Marasco et al, 2013) [Model]
McIntyre CC, Grill WM, Sherman DL, Thakor NV (2004) Cellular effects of deep brain stimulation: model-based analysis of activation and inhibition. J Neurophysiol 91:1457-69 [Journal] [PubMed]
Neubig M, Destexhe A Are inhibitory synaptic conductances on thalamic relay neurons inhomogeneous? Are synapses from individual afferents clustered? Neurocomputing 32-33:213-218
Neubig M, Destexhe A (1999) Low threshold calcium T-current IV curve geometry is alterable through the distribution of T-channels in thalamic relay neurons Neurocomputing 26-27:215-221
Neubig M, Destexhe A (2000) The dendritic organization of thalamocortical relay neurons and the dual functions of their inhibitory synaptic input Thalamus Regul Syst
Parekh R, Ascoli GA (2013) Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron 77:1017-38 [Journal] [PubMed]
   Neuronal morphology goes digital ... (Parekh & Ascoli 2013) [Model]
Reinker S, Puil E, Miura RM (2004) Membrane resonance and stochastic resonance modulate firing patterns of thalamocortical neurons. J Comput Neurosci 16:15-25 [PubMed]
Rudolph M, Destexhe A (2003) A fast-conducting, stochastic integrative mode for neocortical neurons in vivo. J Neurosci 23:2466-76 [PubMed]
Schaefer AT, Larkum ME, Sakmann B, Roth A (2003) Coincidence detection in pyramidal neurons is tuned by their dendritic branching pattern. J Neurophysiol 89:3143-54 [Journal] [PubMed]
   Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2003) [Model]
Schiller J, Major G, Koester HJ, Schiller Y (2000) NMDA spikes in basal dendrites of cortical pyramidal neurons. Nature 404:285-9 [Journal] [PubMed]
So RQ, Kent AR, Grill WM (2012) Relative contributions of local cell and passing fiber activation and silencing to changes in thalamic fidelity during deep brain stimulation and lesioning: a computational modeling study. J Comput Neurosci 32:499-519 [Journal] [PubMed]
   Basal ganglia-thalamic network model for deep brain stimulation (So et al. 2011) [Model]
Steuber V, Schultheiss NW, Silver RA, De Schutter E, Jaeger D (2011) Determinants of synaptic integration and heterogeneity in rebound firing explored with data-driven models of deep cerebellar nucleus cells. J Comput Neurosci 30:633-58 [Journal] [PubMed]
   Cerebellar Nucleus Neuron (Steuber, Schultheiss, Silver, De Schutter & Jaeger, 2010) [Model]
   Robust transmission in the inhibitory Purkinje Cell to Cerebellar Nuclei pathway (Abbasi et al 2017) [Model]
Traboulsie A, Chemin J, Kupfer E, Nargeot J, Lory P (2006) T-type calcium channels are inhibited by fluoxetine and its metabolite norfluoxetine. Mol Pharmacol 69:1963-8 [Journal] [PubMed]
Vitko I, Chen Y, Arias JM, Shen Y, Wu XR, Perez-Reyes E (2005) Functional characterization and neuronal modeling of the effects of childhood absence epilepsy variants of CACNA1H, a T-type calcium channel. J Neurosci 25:4844-55 [Journal] [PubMed]
   T channel currents (Vitko et al 2005) [Model]
Williams SR, Stuart GJ (2000) Action potential backpropagation and somato-dendritic distribution of ion channels in thalamocortical neurons. J Neurosci 20:1307-17 [PubMed]
   Thalamic Relay Neuron: I-T current (Williams, Stuart 2000) [Model]
Wolfart J, Debay D, Le Masson G, Destexhe A, Bal T (2005) Synaptic background activity controls spike transfer from thalamus to cortex. Nat Neurosci 8:1760-7 [Journal] [PubMed]
Yousif NAB, Denham M (2004) Action potential backpropagation in a model thalamocortical relay cell Neurocomputing 58-60:393-400
(105 refs)

Destexhe A, Babloyantz A, Sejnowski TJ (1993) Ionic mechanisms for intrinsic slow oscillations in thalamic relay neurons. Biophys J 65:1538-52 [PubMed]

References and models cited by this paper

References and models that cite this paper

Avanzini G, de Curtis M, Panzica F, Spreafico R (1989) Intrinsic properties of nucleus reticularis thalami neurones of the rat studied in vitro. J Physiol 416:111-22 [PubMed]
Bal T, McCormick DA (1993) Mechanisms of oscillatory activity in guinea-pig nucleus reticularis thalami in vitro: a mammalian pacemaker. J Physiol 468:669-91 [PubMed]
Blaustein MP (1988) Calcium transport and buffering in neurons. Trends Neurosci 11:438-43 [PubMed]
Buchholtz F, Golowasch J, Epstein IR, Marder E (1992) Mathematical model of an identified stomatogastric ganglion neuron. J Neurophysiol 67:332-40 [Journal] [PubMed]
Budde T, Mager R, Pape HC (1992) Different Types of Potassium Outward Current in Relay Neurons Acutely Isolated from the Rat Lateral Geniculate Nucleus. Eur J Neurosci 4:708-722 [PubMed]
Coulter DA, Huguenard JR, Prince DA (1989) Calcium currents in rat thalamocortical relay neurones: kinetic properties of the transient, low-threshold current. J Physiol 414:587-604 [PubMed]
Crunelli V, Lightowler S, Pollard CE (1989) A T-type Ca2+ current underlies low-threshold Ca2+ potentials in cells of the cat and rat lateral geniculate nucleus. J Physiol 413:543-61 [PubMed]
Deschênes M, Paradis M, Roy JP, Steriade M (1984) Electrophysiology of neurons of lateral thalamic nuclei in cat: resting properties and burst discharges. J Neurophysiol 51:1196-219 [Journal] [PubMed]
Destexhe A, Babloyantz A (1993) A model of the inward current Ih and its possible role in thalamocortical oscillations. Neuroreport 4:223-6 [PubMed]
Destexhe A, Lytton WW, Sejnowski TJ, Mccormick DA, Contreras D, Steriade M (1993) A model of 7-14 Hz spindling in the thalamus and thalamic reticular nucleus: interaction between intrinsic and network properties Soc Neurosci Abstracts 19:516
Destexhe A, McCormick DA, Sejnowski TJ (1993) A model for 8-10 Hz spindling in interconnected thalamic relay and reticularis neurons. Biophys J 65:2473-7 [Journal] [PubMed]
DiFrancesco D (1985) The cardiac hyperpolarizing-activated current, if. Origins and developments. Prog Biophys Mol Biol 46:163-83 [PubMed]
DiFrancesco D, Noble D (1985) A model of cardiac electrical activity incorporating ionic pumps and concentration changes. Philos Trans R Soc Lond B Biol Sci 307:353-98 [Journal] [PubMed]
   Cardiac action potentials and pacemaker activity of sinoatrial node (DiFrancesco & Noble 1985) [Model]
Dossi RC, Nuñez A, Steriade M (1992) Electrophysiology of a slow (0.5-4 Hz) intrinsic oscillation of cat thalamocortical neurones in vivo. J Physiol 447:215-34 [PubMed]
Erickson KR, Ronnekleiv OK, Kelly MJ (1993) Electrophysiology of guinea-pig supraoptic neurones: role of a hyperpolarization-activated cation current in phasic firing. J Physiol 460:407-25 [PubMed]
Fitzhugh R (1961) Impulses and Physiological States in Theoretical Models of Nerve Membrane. Biophys J 1:445-66 [PubMed]
Galligan JJ, Tatsumi H, Shen KZ, Surprenant A, North RA (1990) Cation current activated by hyperpolarization (IH) in guinea pig enteric neurons. Am J Physiol 259:G966-72 [Journal] [PubMed]
Guckenheimer J, Holmes P (1983) Nonlinear Oscillations, Dynamical Systems, and Bifurcations of Vector Fields, 2nd edition.
Haby M, Leresche N, Jassik-Gerschenfeld D, Soltesz I, Crunelli V (1988) [Spontaneous rhythmic depolarization in the principal cells of the lateral geniculate body in vitro: the role of NMDA receptors]. C R Acad Sci III 306:195-9 [PubMed]
Hagiwara N, Irisawa H (1989) Modulation by intracellular Ca2+ of the hyperpolarization-activated inward current in rabbit single sino-atrial node cells. J Physiol 409:121-41 [PubMed]
Hines M (1989) A program for simulation of nerve equations with branching geometries. Int J Biomed Comput 24:55-68 [PubMed]
Huguenard JR, McCormick DA (1992) Simulation of the currents involved in rhythmic oscillations in thalamic relay neurons. J Neurophysiol 68:1373-83 [Journal] [PubMed]
Huguenard JR, Prince DA (1991) Slow inactivation of a TEA-sensitive K current in acutely isolated rat thalamic relay neurons. J Neurophysiol 66:1316-28 [Journal] [PubMed]
Huguenard JR, Prince DA (1992) A novel T-type current underlies prolonged Ca(2+)-dependent burst firing in GABAergic neurons of rat thalamic reticular nucleus. J Neurosci 12:3804-17 [PubMed]
Jahnsen H, Llinás R (1984) Ionic basis for the electro-responsiveness and oscillatory properties of guinea-pig thalamic neurones in vitro. J Physiol 349:227-47 [PubMed]
Jahnsen H, Llinás R (1984) Electrophysiological properties of guinea-pig thalamic neurones: an in vitro study. J Physiol 349:205-26 [PubMed]
Kamondi A, Reiner PB (1991) Hyperpolarization-activated inward current in histaminergic tuberomammillary neurons of the rat hypothalamus. J Neurophysiol 66:1902-11 [Journal] [PubMed]
Leresche N, Jassik-Gerschenfeld D, Haby M, Soltesz I, Crunelli V (1990) Pacemaker-like and other types of spontaneous membrane potential oscillations of thalamocortical cells. Neurosci Lett 113:72-7 [PubMed]
Leresche N, Lightowler S, Soltesz I, Jassik-Gerschenfeld D, Crunelli V (1991) Low-frequency oscillatory activities intrinsic to rat and cat thalamocortical cells. J Physiol 441:155-74 [PubMed]
Lytton WW, Sejnowski TJ (1992) Computer model of ethosuximide's effect on a thalamic neuron. Ann Neurol 32:131-9 [Journal] [PubMed]
McCormick DA (1991) Functional properties of a slowly inactivating potassium current in guinea pig dorsal lateral geniculate relay neurons. J Neurophysiol 66:1176-89 [Journal] [PubMed]
McCormick DA (1992) Neurotransmitter actions in the thalamus and cerebral cortex and their role in neuromodulation of thalamocortical activity. Prog Neurobiol 39:337-88 [PubMed]
McCormick DA, Huguenard JR (1992) A model of the electrophysiological properties of thalamocortical relay neurons. J Neurophysiol 68:1384-400 [Journal] [PubMed]
McCormick DA, Pape HC (1990) Properties of a hyperpolarization-activated cation current and its role in rhythmic oscillation in thalamic relay neurones. J Physiol 431:291-318 [PubMed]
   Thalamic Relay Neuron: I-h (McCormick, Pape 1990) [Model]
McCormick DA, Pape HC (1990) Noradrenergic and serotonergic modulation of a hyperpolarization-activated cation current in thalamic relay neurones. J Physiol 431:319-42 [PubMed]
McCormick DA, Williamson A (1991) Modulation of neuronal firing mode in cat and guinea pig LGNd by histamine: possible cellular mechanisms of histaminergic control of arousal. J Neurosci 11:3188-99 [PubMed]
McMullen TA, Ly N (1988) Model of oscillatory activity in thalamic neurons: role of voltage- and calcium-dependent ionic conductances. Biol Cybern 58:243-59 [PubMed]
Nuñez A, Curró Dossi R, Contreras D, Steriade M (1992) Intracellular evidence for incompatibility between spindle and delta oscillations in thalamocortical neurons of cat. Neuroscience 48:75-85 [PubMed]
Pape HC (1992) Adenosine promotes burst activity in guinea-pig geniculocortical neurones through two different ionic mechanisms. J Physiol 447:729-53 [PubMed]
Pollard CE, Crunelli V (1988) Intrinsic membrane currents in projection cells of the cat and rat lateral geniculate nucleus Neurosci Lett 32:39
Pontryagin LS (1961) Asymptotic behavior of the solutions of systems of differential equations with a small parameter in the higher derivatives Am. Math. Soc. Trans. Sec. II 18:275-290
Press WH, Flannery BP, Teukolsky SA, Vetterling WT (1986) Numerical Recipes The Art Of Scientic Computing, University CAMBRIDGEPRESS, ed.
Rinzel J (1987) A formal classification of bursting mechanisms in excitable systems. Mathematical Topics in Population Biology, Morphogenesis, and Neurosciences., Teramoto E:Yamaguti M, ed. pp.267
Rinzel J, Ermentrout GB (1989) Analysis of neuronal excitability and oscillations Methods In Neuronal Modeling: From Synapses To Networks, Koch C:Segev I, ed. pp.135
Rose RM, Hindmarsh JL (1989) The assembly of ionic currents in a thalamic neuron. I. The three-dimensional model. Proc R Soc Lond B Biol Sci 237:267-88 [Journal] [PubMed]
Schwindt PC, Spain WJ, Crill WE (1992) Effects of intracellular calcium chelation on voltage-dependent and calcium-dependent currents in cat neocortical neurons. Neuroscience 47:571-8 [PubMed]
Soltesz I, Lightowler S, Leresche N, Jassik-Gerschenfeld D, Pollard CE, Crunelli V (1991) Two inward currents and the transformation of low-frequency oscillations of rat and cat thalamocortical cells. J Physiol 441:175-97 [PubMed]
Steriade M, Contreras D, Curró Dossi R, Nuñez A (1993) The slow (< 1 Hz) oscillation in reticular thalamic and thalamocortical neurons: scenario of sleep rhythm generation in interacting thalamic and neocortical networks. J Neurosci 13:3284-99 [PubMed]
Steriade M, Deschenes M (1984) The thalamus as a neuronal oscillator. Brain Res 320:1-63 [PubMed]
Steriade M, Deschênes M, Domich L, Mulle C (1985) Abolition of spindle oscillations in thalamic neurons disconnected from nucleus reticularis thalami. J Neurophysiol 54:1473-97 [Journal] [PubMed]
Steriade M, Domich L, Oakson G, Deschênes M (1987) The deafferented reticular thalamic nucleus generates spindle rhythmicity. J Neurophysiol 57:260-73 [Journal] [PubMed]
Steriade M, Jones EG, Llinas RR (1990) Thalamic Oscillations And Signalling
Steriade M, Llinás RR (1988) The functional states of the thalamus and the associated neuronal interplay. Physiol Rev 68:649-742 [Journal] [PubMed]
Steriade M, McCormick DA, Sejnowski TJ (1993) Thalamocortical oscillations in the sleeping and aroused brain. Science 262:679-85 [PubMed]
STOLLER A (1949) Slowing of the alpha-rhythm of the electroencephalogram and its association with mental deterioration and epilepsy. J Ment Sci 95:972-84 [PubMed]
Toth T, Crunelli V (1992) Modelling spindle-like oscillations in thalamocortical neurones Soc Neurosci Abstr 18:1018
Tóth T, Crunelli V (1992) Computer simulation of the pacemaker oscillations of thalamocortical cells. Neuroreport 3:65-8 [PubMed]
Traub RD, Miles R (1991) Neuronal Networks Of The Hippocampus
Uchimura N, Cherubini E, North RA (1990) Cation current activated by hyperpolarization in a subset of rat nucleus accumbens neurons. J Neurophysiol 64:1847-50 [Journal] [PubMed]
van Ginneken AC, Giles W (1991) Voltage clamp measurements of the hyperpolarization-activated inward current I(f) in single cells from rabbit sino-atrial node. J Physiol 434:57-83 [PubMed]
von Krosigk M, Bal T, McCormick DA (1993) Cellular mechanisms of a synchronized oscillation in the thalamus. Science 261:361-4 [PubMed]
Wang XJ, Rinzel J, Rogawski MA (1991) A model of the T-type calcium current and the low-threshold spike in thalamic neurons. J Neurophysiol 66:839-50 [Journal] [PubMed]
   T-type Ca current in thalamic neurons (Wang et al 1991) [Model]
Zeeman EC (1973) Differential equations for the heart beat and nerve impulse Dynamical Systems, Peixoto M, ed. pp.683
Aguiar P, Sousa M, Lima D (2010) NMDA channels together with L-type calcium currents and calcium-activated nonspecific cationic currents are sufficient to generate windup in WDR neurons. J Neurophysiol 104:1155-66 [Journal] [PubMed]
   Mathematical model for windup (Aguiar et al. 2010) [Model]
Almog M, Korngreen A (2014) A Quantitative Description of Dendritic Conductances and Its Application to Dendritic Excitation in Layer 5 Pyramidal Neurons J Neurosci 34(1):182-196 [Journal]
   Ionic mechanisms of dendritic spikes (Almog and Korngreen 2014) [Model]
Badoual M, Zou Q, Davison AP, Rudolph M, Bal T, Frégnac Y, Destexhe A (2006) Biophysical and phenomenological models of multiple spike interactions in spike-timing dependent plasticity. Int J Neural Syst 16:79-97 [Journal] [PubMed]
   Biophysical and phenomenological models of spike-timing dependent plasticity (Badoual et al. 2006) [Model]
Brown SA, Moraru II, Schaff JC, Loew LM (2011) Virtual NEURON: a strategy for merged biochemical and electrophysiological modeling. J Comput Neurosci 31:385-400 [Journal] [PubMed]
   A simplified cerebellar Purkinje neuron (the PPR model) (Brown et al. 2011) [Model]
Carnevale NT, Morse TM (1996-2009) Research reports that have used NEURON Web published citations at the NEURON website [Journal]
Conde-Sousa E, Aguiar P (2013) A working memory model for serial order that stores information in the intrinsic excitability properties of neurons. J Comput Neurosci 35:187-99 [Journal] [PubMed]
   Storing serial order in intrinsic excitability: a working memory model (Conde-Sousa & Aguiar 2013) [Model]
Contreras D, Destexhe A, Steriade M (1997) Intracellular and computational characterization of the intracortical inhibitory control of synchronized thalamic inputs in vivo. J Neurophysiol 78:335-50 [Journal] [PubMed]
Destexhe A (1998) Spike-and-wave oscillations based on the properties of GABAB receptors. J Neurosci 18:9099-111 [PubMed]
Destexhe A, Contreras D, Sejnowski TJ, Steriade M (1994) A model of spindle rhythmicity in the isolated thalamic reticular nucleus. J Neurophysiol 72:803-18 [Journal] [PubMed]
   Thalamic Reticular Network (Destexhe et al 1994) [Model]
Destexhe A, Contreras D, Steriade M (1998) Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. J Neurophysiol 79:999-1016 [Journal] [PubMed]
   Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]
Destexhe A, Mainen ZF, Sejnowski TJ (1994) Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism. J Comput Neurosci 1:195-230 [PubMed]
   Application of a common kinetic formalism for synaptic models (Destexhe et al 1994) [Model]
   Kinetic synaptic models applicable to building networks (Destexhe et al 1998) [Model]
Destexhe A, McCormick DA, Sejnowski TJ (1993) A model for 8-10 Hz spindling in interconnected thalamic relay and reticularis neurons. Biophys J 65:2473-7 [Journal] [PubMed]
Destexhe A, Sejnowski TJ (2003) Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiol Rev 83:1401-53 [Journal] [PubMed]
Ermentrout GB, Terman DH (2010) Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics, Antman SS:Marsden JE:Sirovich L:Wiggins, ed. pp.1 [Journal]
   Mathematical Foundations of Neuroscience (Ermentrout and Terman 2010) [Model]
Hadipour-Niktarash A (2006) A computational model of how an interaction between the thalamocortical and thalamic reticular neurons transforms the low-frequency oscillations of the globus pallidus. J Comput Neurosci 20:299-320 [Journal] [PubMed]
   Thalamic transformation of pallidal input (Hadipour-Niktarash 2006) [Model]
Halnes G, Augustinaite S, Heggelund P, Einevoll GT, Migliore M (2011) A multi-compartment model for interneurons in the dorsal lateral geniculate nucleus. PLoS Comput Biol 7:e1002160 [Journal] [PubMed]
   A multi-compartment model for interneurons in the dLGN (Halnes et al. 2011) [Model]
Hines ML, Carnevale NT (2003) Personal Communication of NEURON bibliography
Jones SR, Pinto DJ, Kaper TJ, Kopell N (2000) Alpha-frequency rhythms desynchronize over long cortical distances: a modeling study. J Comput Neurosci 9:271-91 [PubMed]
Kanold PO, Manis PB (2001) A physiologically based model of discharge pattern regulation by transient K+ currents in cochlear nucleus pyramidal cells. J Neurophysiol 85:523-38 [Journal] [PubMed]
   CN pyramidal fusiform cell (Kanold, Manis 2001) [Model]
Li G, Henriquez C, Fröhlich F (2017) Unified Thalamic Model Generates Multiple Distinct Oscillations with State-dependent Entrainment by Stimulation PLOS Computational Biology 13(10):e1005797 [Journal]
   A unified thalamic model of multiple distinct oscillations (Li, Henriquez and Fröhlich 2017) [Model]
Liu Y, Milton J, Campbell SA (2019) Outgrowing seizures in Childhood Absence Epilepsy: time delays and bistability. J Comput Neurosci [Journal] [PubMed]
   Thalamocortical loop with delay for investigation of absence epilepsy (Liu et al 2019) [Model]
Lytton WW, Contreras D, Destexhe A, Steriade M (1997) Dynamic interactions determine partial thalamic quiescence in a computer network model of spike-and-wave seizures. J Neurophysiol 77:1679-96 [Journal] [PubMed]
   Thalamic quiescence of spike and wave seizures (Lytton et al 1997) [Model]
Lytton WW, Destexhe A, Sejnowski TJ (1996) Control of slow oscillations in the thalamocortical neuron: a computer model. Neuroscience 70:673-84 [PubMed]
Mattioni M, Le Novère N (2013) Integration of biochemical and electrical signaling-multiscale model of the medium spiny neuron of the striatum. PLoS One 8:e66811 [Journal] [PubMed]
   Multiscale simulation of the striatal medium spiny neuron (Mattioni & Le Novere 2013) [Model]
Paré D, Lang EJ, Destexhe A (1998) Inhibitory control of somatodendritic interactions underlying action potentials in neocortical pyramidal neurons in vivo: an intracellular and computational study. Neuroscience 84:377-402 [PubMed]
Pinto DJ, Jones SR, Kaper TJ, Kopell N (2003) Analysis of State-Dependent Transitions in Frequency and Long-Distance Coordination in a Model Oscillatory Cortical Circuit Journal of Computational Neuroscience 15:283-298 [Journal] [PubMed]
Sejnowski TJ, Destexhe A (2000) Why do we sleep? Brain Res 886:208-223 [PubMed]
Sousa M, Szucs P, Lima D, Aguiar P (2014) The pronociceptive dorsal reticular nucleus contains mostly tonic neurons and shows a high prevalence of spontaneous activity in block preparation. J Neurophysiol 111:1507-18 [Journal] [PubMed]
   DRt neuron model (Sousa et al., 2014) [Model]
Thomas E, Lytton WW (1998) Computer model of antiepileptic effects mediated by alterations in GABA(A)-mediated inhibition. Neuroreport 9:691-6 [PubMed]
van Elburg RA, van Ooyen A (2010) Impact of dendritic size and dendritic topology on burst firing in pyramidal cells. PLoS Comput Biol 6:e1000781 [Journal] [PubMed]
   Impact of dendritic size and topology on pyramidal cell burst firing (van Elburg and van Ooyen 2010) [Model]
van Ooyen A, Duijnhouwer J, Remme MW, van Pelt J (2002) The effect of dendritic topology on firing patterns in model neurons. Network 13:311-25 [PubMed]
Vich C, Guillamon A (2015) Dissecting estimation of conductances in subthreshold regimes. J Comput Neurosci 39:271-87 [Journal] [PubMed]
   Estimation of conductance in a conductance-based model of quadratic type (Vich & Guillamon 2015) [Model]
Wolf JA, Moyer JT, Lazarewicz MT, Contreras D, Benoit-Marand M, O'Donnell P, Finkel LH (2005) NMDA/AMPA ratio impacts state transitions and entrainment to oscillations in a computational model of the nucleus accumbens medium spiny projection neuron. J Neurosci 25:9080-95 [Journal] [PubMed]
   Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005) [Model]
Zeldenrust F, Chameau PJ, Wadman WJ (2013) Reliability of spike and burst firing in thalamocortical relay cells. J Comput Neurosci 35:317-34 [Journal] [PubMed]
   Reliability of Morris-Lecar neurons with added T, h, and AHP currents (Zeldenrust et al. 2013) [Model]
(101 refs)

Destexhe A, Bal T, McCormick DA, Sejnowski TJ (1996) Ionic mechanisms underlying synchronized oscillations and propagating waves in a model of ferret thalamic slices. J Neurophysiol 76:2049-70 [PubMed]

References and models cited by this paper

References and models that cite this paper

Akasu T, Tokimasa T (1992) Cellular metabolism regulating H and M currents in bullfrog sympathetic ganglia. Can J Physiol Pharmacol 70 Suppl:S51-5
Andersen P, Andersson S (1968) Physiological Basis Of The Alpha Rhythm
ANDERSEN P, RUDJORD T (1964) SIMULATION OF A NEURONAL NETWORK OPERATING RHYTHMICALLY THROUGH RECURRENT INHIBITION. Nature 204:289-90 [PubMed]
Bal T, McCormick DA (1993) Mechanisms of oscillatory activity in guinea-pig nucleus reticularis thalami in vitro: a mammalian pacemaker. J Physiol 468:669-91 [PubMed]
Bal T, McCormick DA (1996) What stops synchronized thalamocortical oscillations? Neuron 17:297-308 [PubMed]
Bal T, von Krosigk M, McCormick DA (1995) Synaptic and membrane mechanisms underlying synchronized oscillations in the ferret lateral geniculate nucleus in vitro. J Physiol 483 ( Pt 3):641-63 [PubMed]
Bal T, von Krosigk M, McCormick DA (1995) Role of the ferret perigeniculate nucleus in the generation of synchronized oscillations in vitro. J Physiol 483 ( Pt 3):665-85 [PubMed]
Boland LM, Bean BP (1993) Modulation of N-type calcium channels in bullfrog sympathetic neurons by luteinizing hormone-releasing hormone: kinetics and voltage dependence. J Neurosci 13:516-33 [PubMed]
Clements JD, Lester RA, Tong G, Jahr CE, Westbrook GL (1992) The time course of glutamate in the synaptic cleft. Science 258:1498-501 [PubMed]
Colquhoun D, Jonas P, Sakmann B (1992) Action of brief pulses of glutamate on AMPA/kainate receptors in patches from different neurones of rat hippocampal slices. J Physiol 458:261-87 [PubMed]
Contreras D, Destexhe A, Sejnowski TJ, Steriade M (1995) Synchronization of thalamic spindle oscillations is enhanced by cortical feedback input Soc Neurosci Abstr 21:1187
Contreras D, Steriade M (1996) Spindle oscillation in cats: the role of corticothalamic feedback in a thalamically generated rhythm. J Physiol 490 ( Pt 1):159-79 [PubMed]
Coulter DA, Huguenard JR, Prince DA (1989) Calcium currents in rat thalamocortical relay neurones: kinetic properties of the transient, low-threshold current. J Physiol 414:587-604 [PubMed]
Cucchiaro JB, Uhlrich DJ, Sherman SM (1991) Electron-microscopic analysis of synaptic input from the perigeniculate nucleus to the A-laminae of the lateral geniculate nucleus in cats. J Comp Neurol 310:316-36 [Journal] [PubMed]
Davies CH, Davies SN, Collingridge GL (1990) Paired-pulse depression of monosynaptic GABA-mediated inhibitory postsynaptic responses in rat hippocampus. J Physiol 424:513-31 [PubMed]
Destexhe A, Babloyantz A (1993) A model of the inward current Ih and its possible role in thalamocortical oscillations. Neuroreport 4:223-6 [PubMed]
Destexhe A, Babloyantz A, Sejnowski TJ (1993) Ionic mechanisms for intrinsic slow oscillations in thalamic relay neurons. Biophys J 65:1538-52 [Journal] [PubMed]
   Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]
Destexhe A, Bal T, Mccormick DA, Sejnowski TJ (1995) Ionic mechanisms underlying synchronized oscillations and traveling waves in a model of ferret thalamic slices Soc Neurosci Abstr 21:1187
Destexhe A, Contreras D, Sejnowski TJ, Steriade M (1994) Modeling the control of reticular thalamic oscillations by neuromodulators. Neuroreport 5:2217-20 [PubMed]
Destexhe A, Contreras D, Sejnowski TJ, Steriade M (1994) A model of spindle rhythmicity in the isolated thalamic reticular nucleus. J Neurophysiol 72:803-18 [Journal] [PubMed]
   Thalamic Reticular Network (Destexhe et al 1994) [Model]
Destexhe A, Contreras D, Steriade M, Sejnowski TJ, Huguenard JR (1996) In vivo, in vitro, and computational analysis of dendritic calcium currents in thalamic reticular neurons. J Neurosci 16:169-85 [Journal] [PubMed]
   Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996) [Model]
Destexhe A, Mainen ZF, Sejnowski TJ (1994) Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism. J Comput Neurosci 1:195-230 [PubMed]
   Application of a common kinetic formalism for synaptic models (Destexhe et al 1994) [Model]
   Kinetic synaptic models applicable to building networks (Destexhe et al 1998) [Model]
Destexhe A, McCormick DA, Sejnowski TJ (1993) A model for 8-10 Hz spindling in interconnected thalamic relay and reticularis neurons. Biophys J 65:2473-7 [Journal] [PubMed]
Destexhe A, Sejnowski TJ (1995) G protein activation kinetics and spillover of gamma-aminobutyric acid may account for differences between inhibitory responses in the hippocampus and thalamus. Proc Natl Acad Sci U S A 92:9515-9 [PubMed]
Destexhe A, Sejnowski TJ (1997) Synchronized oscillations in thalamic networks: insights from modeling studies Thalamus, Steriade M:Jones EG:Mccormick DA, ed. pp.331
DiFrancesco D, Mangoni M (1994) Modulation of single hyperpolarization-activated channels (i(f)) by cAMP in the rabbit sino-atrial node. J Physiol 474:473-82 [PubMed]
Dutar P, Nicoll RA (1988) A physiological role for GABAB receptors in the central nervous system. Nature 332:156-8 [Journal] [PubMed]
Evans RG, Ludbrook J, Potocnik SJ (1989) Intracisternal naloxone and cardiac nerve blockade prevent vasodilatation during simulated haemorrhage in awake rabbits. J Physiol 409:1-14 [PubMed]
Fitzgibbon T, Tevah LV, Sefton AJ (1995) Connections between the reticular nucleus of the thalamus and pulvinar-lateralis posterior complex: a WGA-HRP study. J Comp Neurol 363:489-504 [Journal] [PubMed]
Gloor P, Avoli M, Kostopoulos G (1990) Thalamocortical relationships in generalized epilepsy with bilaterally synchronous spike-and-wave discharge Generalized Epilepsy, Avoli M:Gloor P:Kostopoulos G:Naquet R, ed. pp.190
Golard A, Siegelbaum SA (1993) Kinetic basis for the voltage-dependent inhibition of N-type calcium current by somatostatin and norepinephrine in chick sympathetic neurons. J Neurosci 13:3884-94 [PubMed]
Golomb D, Wang XJ, Rinzel J (1994) Synchronization properties of spindle oscillations in a thalamic reticular nucleus model. J Neurophysiol 72:1109-26 [Journal] [PubMed]
Golomb D, Wang XJ, Rinzel J (1996) Propagation of spindle waves in a thalamic slice model. J Neurophysiol 75:750-69 [Journal] [PubMed]
Gonzalo-Ruiz A, Lieberman AR (1995) Topographic organization of projections from the thalamic reticular nucleus to the anterior thalamic nuclei in the rat. Brain Res Bull 37:17-35 [PubMed]
Harris RM (1987) Axon collaterals in the thalamic reticular nucleus from thalamocortical neurons of the rat ventrobasal thalamus. J Comp Neurol 258:397-406 [Journal] [PubMed]
Hines M (1993) NEURON--a program for simulation of nerve equations. Neural Systems: Analysis And Modeling, Eeckman F, ed. pp.127
Hosford DA, Clark S, Cao Z, Wilson WA, Lin FH, Morrisett RA, Huin A (1992) The role of GABAB receptor activation in absence seizures of lethargic (lh/lh) mice. Science 257:398-401 [PubMed]
Huguenard JR, Coulter DA, Prince DA (1991) A fast transient potassium current in thalamic relay neurons: kinetics of activation and inactivation. J Neurophysiol 66:1304-15 [Journal] [PubMed]
Huguenard JR, McCormick DA (1992) Simulation of the currents involved in rhythmic oscillations in thalamic relay neurons. J Neurophysiol 68:1373-83 [Journal] [PubMed]
Huguenard JR, Prince DA (1992) A novel T-type current underlies prolonged Ca(2+)-dependent burst firing in GABAergic neurons of rat thalamic reticular nucleus. J Neurosci 12:3804-17 [PubMed]
Huguenard JR, Prince DA (1994) Clonazepam suppresses GABAB-mediated inhibition in thalamic relay neurons through effects in nucleus reticularis. J Neurophysiol 71:2576-81 [Journal] [PubMed]
Huguenard JR, Prince DA (1994) Intrathalamic rhythmicity studied in vitro: nominal T-current modulation causes robust antioscillatory effects. J Neurosci 14:5485-502 [PubMed]
Jones EG (1985) The Thalamus
Kim U, Bal T, McCormick DA (1995) Spindle waves are propagating synchronized oscillations in the ferret LGNd in vitro. J Neurophysiol 74:1301-23 [Journal] [PubMed]
Kopell N, LeMasson G (1994) Rhythmogenesis, amplitude modulation, and multiplexing in a cortical architecture. Proc Natl Acad Sci U S A 91:10586-90 [PubMed]
Krosigk VONM, Mccormick DA (1992) Mechanisms of frequency dependent facilitation of corticothalamic EPSPs Soc Neurosci Abstr 18:140
Legendre P, Rosenmund C, Westbrook GL (1993) Inactivation of NMDA channels in cultured hippocampal neurons by intracellular calcium. J Neurosci 13:674-84 [PubMed]
Leresche N, Lightowler S, Soltesz I, Jassik-Gerschenfeld D, Crunelli V (1991) Low-frequency oscillatory activities intrinsic to rat and cat thalamocortical cells. J Physiol 441:155-74 [PubMed]
Liu XB, Warren RA, Jones EG (1995) Synaptic distribution of afferents from reticular nucleus in ventroposterior nucleus of cat thalamus. J Comp Neurol 352:187-202 [Journal] [PubMed]
Liu Z, Vergnes M, Depaulis A, Marescaux C (1992) Involvement of intrathalamic GABAB neurotransmission in the control of absence seizures in the rat. Neuroscience 48:87-93 [PubMed]
MacNeil S, Lakey T, Tomlinson S (1985) Calmodulin regulation of adenylate cyclase activity. Cell Calcium 6:213-6 [PubMed]
McCormick DA (1992) Neurotransmitter actions in the thalamus and cerebral cortex and their role in neuromodulation of thalamocortical activity. Prog Neurobiol 39:337-88 [PubMed]
McCormick DA, Huguenard JR (1992) A model of the electrophysiological properties of thalamocortical relay neurons. J Neurophysiol 68:1384-400 [Journal] [PubMed]
McCormick DA, Pape HC (1990) Properties of a hyperpolarization-activated cation current and its role in rhythmic oscillation in thalamic relay neurones. J Physiol 431:291-318 [PubMed]
   Thalamic Relay Neuron: I-h (McCormick, Pape 1990) [Model]
McCormick DA, Pape HC (1990) Noradrenergic and serotonergic modulation of a hyperpolarization-activated cation current in thalamic relay neurones. J Physiol 431:319-42 [PubMed]
Minderhoud JM (1971) An anatomical study of the efferent connections of the thalamic reticular nucleus. Exp Brain Res 112:435-46 [PubMed]
Morison RS, Basset DL (1945) Electrical activity of the thalamus and basal ganglia in decorticate cats J Neurophysiol 8:309-314 [Journal]
Mühlethaler M, Serafin M (1990) Thalamic spindles in an isolated and perfused preparation in vitro. Brain Res 524:17-21 [PubMed]
Mulle C, Madariaga A, Deschênes M (1986) Morphology and electrophysiological properties of reticularis thalami neurons in cat: in vivo study of a thalamic pacemaker. J Neurosci 6:2134-45 [PubMed]
Nuñez A, Curró Dossi R, Contreras D, Steriade M (1992) Intracellular evidence for incompatibility between spindle and delta oscillations in thalamocortical neurons of cat. Neuroscience 48:75-85 [PubMed]
Ohara PT, Lieberman AR (1985) The thalamic reticular nucleus of the adult rat: experimental anatomical studies. J Neurocytol 14:365-411 [PubMed]
Otis TS, De Koninck Y, Mody I (1993) Characterization of synaptically elicited GABAB responses using patch-clamp recordings in rat hippocampal slices. J Physiol 463:391-407 [PubMed]
Otis TS, Mody I (1992) Modulation of decay kinetics and frequency of GABAA receptor-mediated spontaneous inhibitory postsynaptic currents in hippocampal neurons. Neuroscience 49:13-32 [PubMed]
Pinault D, Bourassa J, Deschênes M (1995) The axonal arborization of single thalamic reticular neurons in the somatosensory thalamus of the rat. Eur J Neurosci 7:31-40 [PubMed]
Press WH, Flannery BP, Teukolsky SA, Vetterling WT (1986) Numerical Recipes The Art Of Scientic Computing, University CAMBRIDGEPRESS, ed.
Rush ME, Rinzel J (1994) Analysis of bursting in a thalamic neuron model. Biol Cybern 71:281-91 [PubMed]
Sanchez-vives MV, Bal T, Mccormick DA (1995) Properties of GABAergic inhibition in the ferret LGNd contributing to the generation of synchronized oscillations Soc Neurosci Abstr 21:11
Sanderson KJ (1971) The projection of the visual field to the lateral geniculate and medial interlaminar nuclei in the cat. J Comp Neurol 143:101-8 [Journal] [PubMed]
Schwindt PC, Spain WJ, Crill WE (1992) Effects of intracellular calcium chelation on voltage-dependent and calcium-dependent currents in cat neocortical neurons. Neuroscience 47:571-8 [PubMed]
Soltesz I, Crunelli V (1992) GABAA and pre- and post-synaptic GABAB receptor-mediated responses in the lateral geniculate nucleus. Prog Brain Res 90:151-69 [PubMed]
Soltesz I, Lightowler S, Leresche N, Jassik-Gerschenfeld D, Pollard CE, Crunelli V (1991) Two inward currents and the transformation of low-frequency oscillations of rat and cat thalamocortical cells. J Physiol 441:175-97 [PubMed]
Steriade M, Curró Dossi R, Contreras D (1993) Electrophysiological properties of intralaminar thalamocortical cells discharging rhythmic (approximately 40 HZ) spike-bursts at approximately 1000 HZ during waking and rapid eye movement sleep. Neuroscience 56:1-9 [PubMed]
Steriade M, Deschenes M (1984) The thalamus as a neuronal oscillator. Brain Res 320:1-63 [PubMed]
Steriade M, Deschênes M, Domich L, Mulle C (1985) Abolition of spindle oscillations in thalamic neurons disconnected from nucleus reticularis thalami. J Neurophysiol 54:1473-97 [Journal] [PubMed]
Steriade M, Domich L, Oakson G, Deschênes M (1987) The deafferented reticular thalamic nucleus generates spindle rhythmicity. J Neurophysiol 57:260-73 [Journal] [PubMed]
Steriade M, Llinás RR (1988) The functional states of the thalamus and the associated neuronal interplay. Physiol Rev 68:649-742 [Journal] [PubMed]
Steriade M, McCormick DA, Sejnowski TJ (1993) Thalamocortical oscillations in the sleeping and aroused brain. Science 262:679-85 [PubMed]
Toth T, Crunelli V (1992) Modelling spindle-like oscillations in thalamocortical neurones Soc Neurosci Abstr 18:1018
Traub RD, Miles R (1991) Neuronal Networks Of The Hippocampus
Uhlrich DJ, Cucchiaro JB, Humphrey AL, Sherman SM (1991) Morphology and axonal projection patterns of individual neurons in the cat perigeniculate nucleus. J Neurophysiol 65:1528-41 [Journal] [PubMed]
Verzeano M, Laufer M, Spear P, McDonald S (1965) [The activity of the neuronal networks of the thalamus of monkeys]. Actual Neurophysiol (Paris) 6:223-51 [PubMed]
VERZEANO M, NEGISHI K (1960) Neuronal activity in cortical and thalamic networks. J Gen Physiol 43(6)Suppl:177-95 [PubMed]
von Krosigk M, Bal T, McCormick DA (1993) Cellular mechanisms of a synchronized oscillation in the thalamus. Science 261:361-4 [PubMed]
Wang XJ (1994) Multiple dynamical modes of thalamic relay neurons: rhythmic bursting and intermittent phase-locking. Neuroscience 59:21-31 [PubMed]
   Multiple dynamical modes of thalamic relay neurons (Wang XJ 1994) [Model]
Warren RA, Agmon A, Jones EG (1994) Oscillatory synaptic interactions between ventroposterior and reticular neurons in mouse thalamus in vitro. J Neurophysiol 72:1993-2003 [Journal] [PubMed]
Xiang Z, Greenwood AC, Brown T (1992) Measurement and analysis of hippocampal mossy-fiber synapses Soc Neurosci Abstr 18:1350
Yamada M, Jahangir A, Hosoya Y, Inanobe A, Katada T, Kurachi Y (1993) GK* and brain G beta gamma activate muscarinic K+ channel through the same mechanism. J Biol Chem 268:24551-4 [PubMed]
Zaza A, Maccaferri G, Mangoni M, DiFrancesco D (1991) Intracellular calcium does not directly modulate cardiac pacemaker (if) channels. Pflugers Arch 419:662-4 [PubMed]
Bazhenov M, Stopfer M, Rabinovich M, Abarbanel HD, Sejnowski TJ, Laurent G (2001) Model of cellular and network mechanisms for odor-evoked temporal patterning in the locust antennal lobe. Neuron 30:569-81 [PubMed]
Bazhenov M, Stopfer M, Rabinovich M, Huerta R, Abarbanel HD, Sejnowski TJ, Laurent G (2001) Model of transient oscillatory synchronization in the locust antennal lobe. Neuron 30:553-67 [PubMed]
Bazhenov M, Timofeev I, Steriade M, Sejnowski T (2000) Spiking-bursting activity in the thalamic reticular nucleus initiates sequences of spindle oscillations in thalamic networks. J Neurophysiol 84:1076-87 [Journal] [PubMed]
Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ (1998) Computational models of thalamocortical augmenting responses. J Neurosci 18:6444-65 [Journal] [PubMed]
   Thalamocortical augmenting response (Bazhenov et al 1998) [Model]
Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ (2002) Model of thalamocortical slow-wave sleep oscillations and transitions to activated States. J Neurosci 22:8691-704 [Journal] [PubMed]
   Sleep-wake transitions in corticothalamic system (Bazhenov et al 2002) [Model]
Behuret S, Deleuze C, Gomez L, Fregnac Y and Bal T (2013) Cortically-controlled population stochastic facilitation as a plausible substrate for guiding sensory transfer across the thalamic gateway PLoS Computational Biology 9(12):e1003401 [Journal]
   A Model Circuit of Thalamocortical Convergence (Behuret et al. 2013) [Model]
Birdno MJ, Kuncel AM, Dorval AD, Turner DA, Gross RE, Grill WM (2012) Stimulus features underlying reduced tremor suppression with temporally patterned deep brain stimulation. J Neurophysiol 107:364-83 [Journal] [PubMed]
   Thalamic network model of deep brain stimulation in essential tremor (Birdno et al. 2012) [Model]
Carnevale NT, Morse TM (1996-2009) Research reports that have used NEURON Web published citations at the NEURON website [Journal]
Cruz GE, Sahley CL, Muller KJ (2007) Neuronal competition for action potential initiation sites in a circuit controlling simple learning. Neuroscience 148:65-81 [Journal] [PubMed]
   Competition for AP initiation sites in a circuit controlling simple learning (Cruz et al. 2007) [Model]
Debay D, Wolfart J, Le Franc Y, Le Masson G, Bal T (2004) Exploring spike transfer through the thalamus using hybrid artificial-biological neuronal networks. J Physiol Paris 98:540-58 [Journal] [PubMed]
Destexhe A (1997) Conductance-based integrate-and-fire models. Neural Comput 9:503-14 [PubMed]
Destexhe A (1998) Spike-and-wave oscillations based on the properties of GABAB receptors. J Neurosci 18:9099-111 [PubMed]
Destexhe A (2000) Modelling corticothalamic feedback and the gating of the thalamus by the cerebral cortex. J Physiol Paris 94:391-410 [PubMed]
Destexhe A, Contreras D, Steriade M (1998) Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. J Neurophysiol 79:999-1016 [Journal] [PubMed]
   Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]
Destexhe A, Contreras D, Steriade M (1999) Cortically-induced coherence of a thalamic-generated oscillation. Neuroscience 92:427-43 [PubMed]
Destexhe A, Sejnowski TJ (2003) Interactions between membrane conductances underlying thalamocortical slow-wave oscillations. Physiol Rev 83:1401-53 [Journal] [PubMed]
Gottschalk A, Haney P (2003) Computational aspects of anesthetic action in simple neural models. Anesthesiology 98:548-64 [PubMed]
Gruber AJ, Dayan P, Gutkin BS, Solla SA (2006) Dopamine modulation in the basal ganglia locks the gate to working memory. J Comput Neurosci 20:153-66 [Journal] [PubMed]
Hadipour-Niktarash A (2006) A computational model of how an interaction between the thalamocortical and thalamic reticular neurons transforms the low-frequency oscillations of the globus pallidus. J Comput Neurosci 20:299-320 [Journal] [PubMed]
   Thalamic transformation of pallidal input (Hadipour-Niktarash 2006) [Model]
Hill S, Tononi G (2005) Modeling sleep and wakefulness in the thalamocortical system. J Neurophysiol 93:1671-98 [Journal] [PubMed]
Hines ML, Carnevale NT (2003) Personal Communication of NEURON bibliography
Houweling AR, Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ (1999) Cortical and thalamic components of augmenting responses: A modeling study Neurocomputing 26-27:735-742
Huertas MA, Groff JR, Smith GD (2005) Feedback inhibition and throughput properties of an integrate-and-fire-or-burst network model of retinogeniculate transmission. J Comput Neurosci 19:147-80 [Journal] [PubMed]
Huertas MA, Smith GD (2006) A multivariate population density model of the dLGN/PGN relay. J Comput Neurosci 21:171-89 [Journal] [PubMed]
Jones SR, Pinto DJ, Kaper TJ, Kopell N (2000) Alpha-frequency rhythms desynchronize over long cortical distances: a modeling study. J Comput Neurosci 9:271-91 [PubMed]
Karameh FN, Dahleh MA, Brown EN, Massaquoi SG (2006) Modeling the contribution of lamina 5 neuronal and network dynamics to low frequency EEG phenomena. Biol Cybern 95:289-310 [Journal] [PubMed]
Le Franc Y, Le Masson G (2010) Multiple firing patterns in deep dorsal horn neurons of the spinal cord: computational analysis of mechanisms and functional implications. J Neurophysiol 104:1978-96 [Journal] [PubMed]
Li G, Henriquez C, Fröhlich F (2017) Unified Thalamic Model Generates Multiple Distinct Oscillations with State-dependent Entrainment by Stimulation PLOS Computational Biology 13(10):e1005797 [Journal]
   A unified thalamic model of multiple distinct oscillations (Li, Henriquez and Fröhlich 2017) [Model]
Liu Y, Milton J, Campbell SA (2019) Outgrowing seizures in Childhood Absence Epilepsy: time delays and bistability. J Comput Neurosci [Journal] [PubMed]
   Thalamocortical loop with delay for investigation of absence epilepsy (Liu et al 2019) [Model]
Lytton WW, Contreras D, Destexhe A, Steriade M (1997) Dynamic interactions determine partial thalamic quiescence in a computer network model of spike-and-wave seizures. J Neurophysiol 77:1679-96 [Journal] [PubMed]
   Thalamic quiescence of spike and wave seizures (Lytton et al 1997) [Model]
Maex R, De Schutter E (1998) Synchronization of golgi and granule cell firing in a detailed network model of the cerebellar granule cell layer. J Neurophysiol 80:2521-37 [Journal] [PubMed]
   Network model of the granular layer of the cerebellar cortex (Maex, De Schutter 1998) [Model]
   Cerebellar granular layer (Maex and De Schutter 1998) [Model]
Martínez-Cañada P, Mobarhan MH, Halnes G, Fyhn M, Morillas C, Pelayo F, Einevoll GT (2018) Biophysical network modeling of the dLGN circuit: Effects of cortical feedback on spatial response properties of relay cells. PLoS Comput Biol 14:e1005930 [Journal] [PubMed]
   Cortical feedback alters visual response properties of dLGN relay cells (Martínez-Cañada et al 2018) [Model]
Osan R, Ermentrout GB (2002) The evolution of synaptically generated waves in one- and two-dimensional domains Physica D 163:217-235
Perreault MC, Raastad M (2006) Contribution of morphology and membrane resistance to integration of fast synaptic signals in two thalamic cell types. J Physiol 577:205-20 [Journal] [PubMed]
Pinto DJ, Jones SR, Kaper TJ, Kopell N (2003) Analysis of State-Dependent Transitions in Frequency and Long-Distance Coordination in a Model Oscillatory Cortical Circuit Journal of Computational Neuroscience 15:283-298 [Journal] [PubMed]
Rubin J, Terman D, Chow C (2001) Localized bumps of activity sustained by inhibition in a two-layer thalamic network. J Comput Neurosci 10:313-31 [PubMed]
Rulkov NF, Timofeev I, Bazhenov M (2004) Oscillations in large-scale cortical networks: map-based model. J Comput Neurosci 17:203-23 [Journal] [PubMed]
   Large cortex model with map-based neurons (Rulkov et al 2004) [Model]
Sejnowski TJ, Destexhe A (2000) Why do we sleep? Brain Res 886:208-223 [PubMed]
Sekirnjak C, du Lac S (2002) Intrinsic firing dynamics of vestibular nucleus neurons. J Neurosci 22:2083-95 [PubMed]
Sohal VS, Huguenard JR (1998) Long-range connections synchronize rather than spread intrathalamic oscillations: computational modeling and in vitro electrophysiology. J Neurophysiol 80:1736-51 [Journal] [PubMed]
Sohal VS, Huguenard JR (2002) Reciprocal inhibition controls the oscillatory state in thalamic networks Neurocomputing 44:653-659
Sohal VS, Huguenard JR (2003) Inhibitory interconnections control burst pattern and emergent network synchrony in reticular thalamus. J Neurosci 23:8978-88 [PubMed]
Sohal VS, Huntsman MM, Huguenard JR (2000) Reciprocal inhibitory connections regulate the spatiotemporal properties of intrathalamic oscillations. J Neurosci 20:1735-45 [PubMed]
Suffczynski P, Kalitzin S, Lopes Da Silva FH (2004) Dynamics of non-convulsive epileptic phenomena modeled by a bistable neuronal network. Neuroscience 126:467-84 [Journal] [PubMed]
   Thalamocortical model of spike and wave seizures (Suffczynski et al. 2004) [Model]
Thomas E, Lytton WW (1998) Computer model of antiepileptic effects mediated by alterations in GABA(A)-mediated inhibition. Neuroreport 9:691-6 [PubMed]
Tiesinga PH, José JV (2000) Synchronous clusters in a noisy inhibitory neural network. J Comput Neurosci 9:49-65 [PubMed]
Vitko I, Chen Y, Arias JM, Shen Y, Wu XR, Perez-Reyes E (2005) Functional characterization and neuronal modeling of the effects of childhood absence epilepsy variants of CACNA1H, a T-type calcium channel. J Neurosci 25:4844-55 [Journal] [PubMed]
   T channel currents (Vitko et al 2005) [Model]
Wang J, Chen S, Nolan MF, Siegelbaum SA (2002) Activity-dependent regulation of HCN pacemaker channels by cyclic AMP: signaling through dynamic allosteric coupling. Neuron 36:451-61 [PubMed]
   Activity dependent regulation of pacemaker channels by cAMP (Wang et al 2002) [Model]
Zhao X, Robinson PA (2015) Generalized seizures in a neural field model with bursting dynamics. J Comput Neurosci 39:197-216 [Journal] [PubMed]
   Neural-field model of generalized seizures (Zhao et al., 2015) [Model]
(150 refs)

Vogels TP, Abbott LF (2005) Signal propagation and logic gating in networks of integrate-and-fire neurons. J Neurosci 25:10786-95 [PubMed]

References and models cited by this paper

References and models that cite this paper

Abeles M (1991) Corticonics: Neural Circuits of the Cerebral Cortex.
Aertsen A, Diesmann M, Gewaltig MO (1996) Propagation of synchronous spiking activity in feedforward neural networks. J Physiol Paris 90:243-7 [PubMed]
Amit DJ, Brunel N (1997) Model of global spontaneous activity and local structured activity during delay periods in the cerebral cortex. Cereb Cortex 7:237-52 [PubMed]
Anderson JS, Lampl I, Gillespie DC, Ferster D (2000) The contribution of noise to contrast invariance of orientation tuning in cat visual cortex. Science 290:1968-72 [PubMed]
Aviel Y, Mehring C, Abeles M, Horn D (2003) On embedding synfire chains in a balanced network. Neural Comput 15:1321-40 [Journal] [PubMed]
Beggs JM, Plenz D (2003) Neuronal avalanches in neocortical circuits. J Neurosci 23:11167-77 [PubMed]
Brunel N (2000) Dynamics of networks of randomly connected excitatory and inhibitory spiking neurons. J Physiol Paris 94:445-63 [PubMed]
Burns BD, Webb AC (1976) The spontaneous activity of neurones in the cat's cerebral cortex. Proc R Soc Lond B Biol Sci 194:211-23 [Journal] [PubMed]
de Carvalho JX , Prado CP (2000) Self-organized criticality in the olami-feder-christensen model Phys Rev Lett 84:4006-9 [Journal] [PubMed]
Dean AF (1981) The variability of discharge of simple cells in the cat striate cortex. Exp Brain Res 44:437-40 [PubMed]
Harris TE (1963) The theory of branching processes
Hawken MJ, Shapley RM, Grosof DH (1996) Temporal-frequency selectivity in monkey visual cortex. Vis Neurosci 13:477-92 [PubMed]
Holt GR, Softky WR, Koch C, Douglas RJ (1996) Comparison of discharge variability in vitro and in vivo in cat visual cortex neurons. J Neurophysiol 75:1806-14 [Journal] [PubMed]
Kuhn A, Aertsen A, Rotter S (2004) Neuronal integration of synaptic input in the fluctuation-driven regime. J Neurosci 24:2345-56 [Journal] [PubMed]
Kumar A, Schrader S, Rotter S, Aertsen A (2005) Dynamics of random networks of spiking neurons with conductance-based synapses Abstr Comput Sys Neurosci
Lerchner A, Ahmadi M, Hertz J (2004) High-conductance states in a mean field cortical network model Neurocomputing 58:935-940
Litvak V, Sompolinsky H, Segev I, Abeles M (2003) On the transmission of rate code in long feedforward networks with excitatory-inhibitory balance. J Neurosci 23:3006-15 [PubMed]
Movshon JA, Thompson ID, Tolhurst DJ (1978) Spatial and temporal contrast sensitivity of neurones in areas 17 and 18 of the cat's visual cortex. J Physiol 283:101-20 [PubMed]
Orban GA, Hoffmann KP, Duysens J (1985) Velocity selectivity in the cat visual system. I. Responses of LGN cells to moving bar stimuli: a comparison with cortical areas 17 and 18. J Neurophysiol 54:1026-49 [Journal] [PubMed]
Reyes AD (2003) Synchrony-dependent propagation of firing rate in iteratively constructed networks in vitro. Nat Neurosci 6:593-9 [Journal] [PubMed]
Softky WR, Koch C (1993) The highly irregular firing of cortical cells is inconsistent with temporal integration of random EPSPs. J Neurosci 13:334-50 [PubMed]
Song S, Sjöström PJ, Reigl M, Nelson S, Chklovskii DB (2005) Highly nonrandom features of synaptic connectivity in local cortical circuits. PLoS Biol 3:e68 [Journal] [PubMed]
van Rossum MC, Turrigiano GG, Nelson SB (2002) Fast propagation of firing rates through layered networks of noisy neurons. J Neurosci 22:1956-66 [PubMed]
van Vreeswijk C, Sompolinsky H (1996) Chaos in neuronal networks with balanced excitatory and inhibitory activity. Science 274:1724-6 [PubMed]
van Vreeswijk C, Sompolinsky H (1998) Chaotic balanced state in a model of cortical circuits. Neural Comput 10:1321-71 [PubMed]
Vogels TP, Rajan K, Abbott LF (2005) Neural network dynamics. Annu Rev Neurosci 28:357-76 [Journal] [PubMed]
Zapperi S, Bækgaard Lauritsen K , Stanley HE (1995) Self-organized branching processes: Mean-field theory for avalanches. Phys Rev Lett 75:4071-4074 [Journal] [PubMed]
Dayhoff JE (2007) Computational properties of networks of synchronous groups of spiking neurons. Neural Comput 19:2433-67 [Journal] [PubMed]
Destexhe A (2009) Self-sustained asynchronous irregular states and Up-Down states in thalamic, cortical and thalamocortical networks of nonlinear integrate-and-fire neurons. J Comput Neurosci 27:493-506 [Journal] [PubMed]
   Asynchronous irregular and up/down states in excitatory and inhibitory NNs (Destexhe 2009) [Model]
Kerr CC, Van Albada SJ, Neymotin SA, Chadderdon GL, Robinson PA, Lytton WW (2013) Cortical information flow in Parkinson's disease: a composite network/field model. Front Comput Neurosci 7:39 [Journal] [PubMed]
   Composite spiking network/neural field model of Parkinsons (Kerr et al 2013) [Model]
Kumar A, Schrader S, Aertsen A, Rotter S (2008) The high-conductance state of cortical networks. Neural Comput 20:1-43 [Journal] [PubMed]
Litwin-Kumar A, Doiron B (2012) Slow dynamics and high variability in balanced cortical networks with clustered connections. Nat Neurosci 15:1498-505 [Journal] [PubMed]
   Excitatory and inhibitory population activity (Bittner et al 2017) (Litwin-Kumar & Doiron 2017) [Model]
Lytton WW, Orman R, Stewart M (2008) Broadening of activity with flow across neural structures. Perception 37:401-7 [Journal] [PubMed]
   Broadening of activity with flow across neural structures (Lytton et al. 2008) [Model]
Marre O, Yger P, Davison AP, Frégnac Y (2009) Reliable recall of spontaneous activity patterns in cortical networks. J Neurosci 29:14596-606 [Journal] [PubMed]
Masuda N, Kori H (2007) Formation of feedforward networks and frequency synchrony by spike-timing-dependent plasticity. J Comput Neurosci 22:327-45 [Journal] [PubMed]
Miller P, Wang XJ (2006) Stability of discrete memory states to stochastic fluctuations in neuronal systems. Chaos 16:026109 [Journal] [PubMed]
Muller L, Brette R, Gutkin B (2011) Spike-timing dependent plasticity and feed-forward input oscillations produce precise and invariant spike phase-locking. Front Comput Neurosci 5:45 [Journal] [PubMed]
   STDP and oscillations produce phase-locking (Muller et al. 2011) [Model]
Potjans TC, Diesmann M (2014) The cell-type specific cortical microcircuit: relating structure and activity in a full-scale spiking network model. Cereb Cortex 24:785-806 [Journal] [PubMed]
   A full-scale cortical microcircuit spiking network model (Shimoura et al 2018) [Model]
Richert M, Nageswaran JM, Dutt N, Krichmar JL (2011) An efficient simulation environment for modeling large-scale cortical processing. Front Neuroinform 5:19 [Journal] [PubMed]
   Efficient simulation environment for modeling large-scale cortical processing (Richert et al. 2011) [Model]
Shimoura RO, Kamiji NL, Pena RFO, Cordeiro VL, Ceballos CC, Cecilia R, Roque AC (2018) [Re] The cell-type specific cortical microcircuit: relating structure and activity in a full-scale spiking network model The ReScience Journal [Journal]
   A full-scale cortical microcircuit spiking network model (Shimoura et al 2018) [Model]
Stewart RD, Bair W (2009) Spiking neural network simulation: numerical integration with the Parker-Sochacki method. J Comput Neurosci 27:115-33 [Journal] [PubMed]
   Numerical Integration of Izhikevich and HH model neurons (Stewart and Bair 2009) [Model]
Sussillo D, Toyoizumi T, Maass W (2007) Self-tuning of neural circuits through short-term synaptic plasticity. J Neurophysiol 97:4079-95 [Journal] [PubMed]
Tomm C, Avermann M, Petersen C, Gerstner W, Vogels TP (2014) Connection-type-specific biases make uniform random network models consistent with cortical recordings. J Neurophysiol 112:1801-14 [Journal] [PubMed]
Vogels TP, Sprekeler H, Zenke F, Clopath C, Gerstner W (2011) Inhibitory plasticity balances excitation and inhibition in sensory pathways and memory networks. Science 334:1569-73 [Journal] [PubMed]
   Inhibitory plasticity balances excitation and inhibition (Vogels et al. 2011) [Model]
Zerlaut Y, Chemla S, Chavane F, Destexhe A (2018) Modeling mesoscopic cortical dynamics using a mean-field model of conductance-based networks of adaptive exponential integrate-and-fire neurons. J Comput Neurosci 44:45-61 [Journal] [PubMed]
   Mesoscopic dynamics from AdEx recurrent networks (Zerlaut et al., JCNS 2017) [Model]
(52 refs)

Brette R, Rudolph M, Carnevale T, Hines M, Beeman D, Bower JM, Diesmann M, Morrison A, Goodman PH, Harris FC, Zirpe M, Natschläger T, Pecevski D, Ermentrout B, Djurfeldt M, Lansner A, Rochel O, Vieville T, Muller E, Davison AP, El Boustani S, Destexhe A (2007) Simulation of networks of spiking neurons: a review of tools and strategies. J Comput Neurosci 23:349-98 [PubMed]

References and models cited by this paper

References and models that cite this paper

Abbott LF, Nelson SB (2000) Synaptic plasticity: taming the beast. Nat Neurosci 3 Suppl:1178-83 [Journal] [PubMed]
Arnold L (1974) Stochastic Differential Equations: Theory And Applications
Bhalla US, Iyengar R (1999) Emergent properties of networks of biological signaling pathways. Science 283:381-7 [PubMed]
   Emergent properties of networks of biological signaling pathways (Bhalla, Iyengar 1999) [Model]
Brette R, Gerstner W (2005) Adaptive exponential integrate-and-fire model as an effective description of neuronal activity. J Neurophysiol 94:3637-42 [Journal] [PubMed]
   Adaptive exponential integrate-and-fire model (Brette & Gerstner 2005) [Model]
Brown R (1988) Calendar queues: A fast 0(1) priority queue implementation for the simulation event set problem J Commun ACM 31:1220-1227
Carriero N, Gelernter D (1989) Linda in context Communications of the ACM, April 1989
Claverol E, Brown A, Chad J (2002) Discrete simulation of large aggregates of neurons Neurocomputing 47:277-297
De Schutter E, Bower JM (1994) An active membrane model of the cerebellar Purkinje cell. I. Simulation of current clamps in slice. J Neurophysiol 71:375-400 [Journal] [PubMed]
   Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]
Destexhe A, Mainen ZF, Sejnowski TJ (1994) Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism. J Comput Neurosci 1:195-230 [PubMed]
   Application of a common kinetic formalism for synaptic models (Destexhe et al 1994) [Model]
   Kinetic synaptic models applicable to building networks (Destexhe et al 1998) [Model]
Destexhe A, Sejnowski TJ (2001) Thalamocortical Assemblies-How Ion Channels, Single Neurons and large-Scale Networks Organize Sleep
   Pyramidal Neuron: Deep, Thalamic Relay and Reticular, Interneuron (Destexhe et al 1998, 2001) [Model]
Diesmann M, Gewaltig MO (2002) NEST: An environment for neural systemssimulations Forschung und wisschenschaftliches Rechnen, Plesser T:Macho V, ed. pp.43
Djurfeldt M, Johansson C, Ekeberg O, Rehn M, Lundqvist M, Lansner A (2005) Massively parallel simulationof brain-scale neuronal network models Technical Report TRITA-NA-P0513, School of Computer Science and Communication, Stockholm
Drewes R (2005) Modeling the brain with NCS and Brainlab LINUX Journal online (http:--www.linuxjournal.com-article-8038)
Drewes R, Maciokas JB, Louis SJ, Goodman PH (2004) An evolutionary autonomous agent with visual cortex and recurrent spiking columnar neural network Lecture Notes In Computer Science 3102:257-258
Ermentrout GB (2002) Simulating, Analyzing, and Animating Dynamical System: A Guide to XPPAUT for Researchers and Students Society for Industrial and Applied Mathematics (SIAM)
Ermentrout GB, Kopell N (1986) Parabolic bursting in an excitable system coupled with a slow oscillation. Siam J Appl Math 46:233-253
Gerstner W, Kistler WM (2002) Mathematical formulations of Hebbian learning. Biol Cybern 87:404-15 [Journal] [PubMed]
Giugliano M (2000) Synthesis of generalized algorithms for the fast computation of synaptic conductances with Markov kinetic models in large network simulations. Neural Comput 12:903-31 [PubMed]
Gupta A, Wang Y, Markram H (2000) Organizing principles for a diversity of GABAergic interneurons and synapses in the neocortex. Science 287:273-8 [PubMed]
Gütig R, Aharonov R, Rotter S, Sompolinsky H (2003) Learning input correlations through nonlinear temporally asymmetric Hebbian plasticity. J Neurosci 23:3697-714 [PubMed]
Gütig R, Sompolinsky H (2006) The tempotron: a neuron that learns spike timing-based decisions. Nat Neurosci 9:420-8 [Journal] [PubMed]
Hammarlund P, Ekeberg O (1998) Large neural network simulations on multiple hardware platforms. J Comput Neurosci 5:443-59 [PubMed]
Hansel D, Mato G, Meunier C, Neltner L (1998) On numerical simulations of integrate-and-fire neural networks. Neural Comput 10:467-83 [PubMed]
Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed]
Houweling AR, Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ (2005) Homeostatic synaptic plasticity can explain post-traumatic epileptogenesis in chronically isolated neocortex. Cereb Cortex 15:834-45 [Journal] [PubMed]
Kanold PO, Manis PB (2005) Encoding the timing of inhibitory inputs. J Neurophysiol 93:2887-97 [Journal] [PubMed]
Köhn J, Wörgötter F (1998) Employing the zeta-transform to optimize the calculation of the synaptic conductance of NMDA and other synaptic channels in network simulations. Neural Comput 10:1639-51 [PubMed]
Lee G, Farhat NH (2001) The double queue method: a numerical method for integrate-and-fire neuron networks. Neural Netw 14:921-32 [PubMed]
Lytton WW (1996) Optimizing synaptic conductance calculation for network simulations. Neural Comput 8:501-9 [PubMed]
Lytton WW, Hines ML (2005) Independent variable time-step integration of individual neurons for network simulations. Neural Comput 17:903-21 [Journal] [PubMed]
   Local variable time step method (Lytton, Hines 2005) [Model]
Markram H, Lübke J, Frotscher M, Roth A, Sakmann B (1997) Physiology and anatomy of synaptic connections between thick tufted pyramidal neurones in the developing rat neocortex. J Physiol 500 ( Pt 2):409-40 [PubMed]
Markram H, Lübke J, Frotscher M, Sakmann B (1997) Regulation of synaptic efficacy by coincidence of postsynaptic APs and EPSPs. Science 275:213-5 [PubMed]
Markram H, Pikus D, Gupta A, Tsodyks M (1998) Potential for multiple mechanisms, phenomena and algorithms for synaptic plasticity at single synapses. Neuropharmacology 37:489-500 [PubMed]
Markram H, Wang Y, Tsodyks M (1998) Differential signaling via the same axon of neocortical pyramidal neurons. Proc Natl Acad Sci U S A 95:5323-8 [PubMed]
Mattia M, Del Giudice P (2000) Efficient event-driven simulation of large networks of spiking neurons and dynamical synapses. Neural Comput 12:2305-29 [PubMed]
Moffitt MA, McIntyre CC (2005) Model-based analysis of cortical recording with silicon microelectrodes. Clin Neurophysiol 116:2240-50 [Journal] [PubMed]
Morrison A, Mehring C, Geisel T, Aertsen AD, Diesmann M (2005) Advancing the boundaries of high-connectivity network simulation with distributed computing. Neural Comput 17:1776-801 [Journal] [PubMed]
Nenadic Z, Ghosh BK, Ulinski P (2003) Propagating waves in visual cortex: a large-scale model of turtle visual cortex. J Comput Neurosci 14:161-84 [PubMed]
   Turtle visual cortex model (Nenadic et al. 2003, Wang et al. 2005, Wang et al. 2006) [Model]
Prescott SA, De Koninck Y (2005) Integration time in a subset of spinal lamina I neurons is lengthened by sodium and calcium currents acting synergistically to prolong subthreshold depolarization. J Neurosci 25:4743-54 [Journal] [PubMed]
   Tonic neuron in spinal lamina I: prolongation of subthreshold depol. (Prescott and De Koninck 2005) [Model]
Reutimann J, Giugliano M, Fusi S (2003) Event-driven simulation of spiking neurons with stochastic dynamics. Neural Comput 15:811-30 [Journal] [PubMed]
Rochel O, Martinez D (2003) An event-driven framework for the simulation of networks of spiking neurons Proc. 11th European Symposium on Artificial Neural Networks :295-300
Rotter S, Diesmann M (1999) Exact digital simulation of time-invariant linear systems with applications to neuronal modeling. Biol Cybern 81:381-402 [Journal] [PubMed]
Rudolph M, Destexhe A (2006) Analytical integrate-and-fire neuron models with conductance-based dynamics for event-driven simulation strategies. Neural Comput 18:2146-210 [Journal] [PubMed]
Saghatelyan A, Roux P, Migliore M, Rochefort C, Desmaisons D, Charneau P, Shepherd GM, Lledo PM (2005) Activity-dependent adjustments of the inhibitory network in the olfactory bulb following early postnatal deprivation. Neuron 46:103-16 [Journal] [PubMed]
   Olfactory bulb granule cell: effects of odor deprivation (Saghatelyan et al 2005) [Model]
Shelley MJ, Tao L (2001) Efficient and accurate time-stepping schemes for integrate-and-fire neuronal networks. J Comput Neurosci 11:111-9 [PubMed]
Sleator D, Tarjan R (1983) Self adjusting binary trees Proc ACM SIGACT Symposium on Theory of Computing :235-245
Song S, Miller KD, Abbott LF (2000) Competitive Hebbian learning through spike-timing-dependent synaptic plasticity. Nat Neurosci 3:919-26 [Journal] [PubMed]
Vitko I, Chen Y, Arias JM, Shen Y, Wu XR, Perez-Reyes E (2005) Functional characterization and neuronal modeling of the effects of childhood absence epilepsy variants of CACNA1H, a T-type calcium channel. J Neurosci 25:4844-55 [Journal] [PubMed]
   T channel currents (Vitko et al 2005) [Model]
Wang Y, Markram H, Goodman PH, Berger TK, Ma J, Goldman-Rakic PS (2006) Heterogeneity in the pyramidal network of the medial prefrontal cortex. Nat Neurosci 9:534-42 [Journal] [PubMed]
Watts L (1994) Event-driven simulation of networks of spiking neurons Advances in Neural Information Processing Systems, Cowan J:Tesauro G:Alspector J, ed. pp.927
Wiebers JL, Goodman PH, Markram H (2000) Blockade of A-type potassium channels recovers memory impairment caused by synaptic loss: Implications for Alzheimers dementia J Investig Med 48:283S
Wilson MA, Bower JM (1989) The simulation of large-scale neuronal networks Methods In Neuronal Modeling: From Synapses To Networks, Koch C:Segev I, ed. pp.291
Wolf JA, Moyer JT, Lazarewicz MT, Contreras D, Benoit-Marand M, O'Donnell P, Finkel LH (2005) NMDA/AMPA ratio impacts state transitions and entrainment to oscillations in a computational model of the nucleus accumbens medium spiny projection neuron. J Neurosci 25:9080-95 [Journal] [PubMed]
   Afferent Integration in the NAcb MSP Cell (Wolf et al. 2005) [Model]
Zeigler B, Praehofer H, Kim T (2000) Theory of Modeling and Simulation Integrating Discrete Event and Continuous Complex Dynamic Systems (2nd ed)
Zeigler BP, Vahie S (1993) DEVS formalism and methodology: unity of conception-diversity of application Proceedings of the 1993 Winter Simulation Conference :573-579
Aisa B, Mingus B, O'Reilly R (2008) The emergent neural modeling system. Neural Netw 21:1146-52 [Journal] [PubMed]
Bédard C, Destexhe A (2008) A modified cable formalism for modeling neuronal membranes at high frequencies. Biophys J 94:1133-43 [Journal] [PubMed]
Brette R, Goodman DF (2011) Vectorized algorithms for spiking neural network simulation. Neural Comput 23:1503-35 [Journal] [PubMed]
   Vectorized algorithms for spiking neural network simulation (Brette and Goodman 2011) [Model]
Carnevale NT, Morse TM (1996-2009) Research reports that have used NEURON Web published citations at the NEURON website [Journal]
Gleeson P, Crook S, Cannon RC, Hines ML, Billings GO, Farinella M, Morse TM, Davison AP, Ray S, Bhalla US, Barnes SR, Dimitrova YD, Silver RA (2010) NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. PLoS Comput Biol 6:e1000815 [Journal] [PubMed]
Huang CW, Cheng JT, Tsai JJ, Wu SN, Huang CC (2009) Diabetic hyperglycemia aggravates seizures and status epilepticus-induced hippocampal damage. Neurotox Res 15:71-81 [Journal] [PubMed]
   Contribution of ATP-sensitive potassium channels in the neuronal network (Huang et al. 2009) [Model]
Huang CW, Huang CC, Lin MW, Tsai JJ, Wu SN (2008) The synergistic inhibitory actions of oxcarbazepine on voltage-gated sodium and potassium currents in differentiated NG108-15 neuronal cells and model neurons. Int J Neuropsychopharmacol 11:597-610 [Journal] [PubMed]
   Synergistic inhibitory action of oxcarbazepine on INa and IK (Huang et al. 2008) [Model]
Huang CW, Tsai JJ, Huang CC, Wu SN (2009) Experimental and simulation studies on the mechanisms of levetiracetam-mediated inhibition of delayed-rectifier potassium current (KV3.1): contribution to the firing of action potentials. J Physiol Pharmacol 60:37-47 [Journal] [PubMed]
   Simulation studies on mechanisms of levetiracetam-mediated inhibition of IK(DR) (Huang et al. 2009) [Model]
Khalil R, Moftah MZ, Moustafa AA (2017) The effects of dynamical synapses on firing rate activity: a spiking neural network model. Eur J Neurosci 46:2445-2470 [Journal] [PubMed]
Kozloski J, Wagner J (2011) An Ultrascalable Solution to Large-scale Neural Tissue Simulation. Front Neuroinform 5:15 [Journal] [PubMed]
Lytton WW, Seidenstein AH, Dura-Bernal S, McDougal RA, Schürmann F, Hines ML (2016) Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON. Neural Comput 28:2063-90 [Journal] [PubMed]
   Parallelizing large networks in NEURON (Lytton et al. 2016) [Model]
McDougal RA, Bulanova AS, Lytton WW (2016) Reproducibility in Computational Neuroscience Models and Simulations. IEEE Trans Biomed Eng 63:2021-35 [Journal] [PubMed]
Podlaski WF, Seeholzer A, Groschner LN, Miesenböck G, Ranjan R, Vogels TP (2017) Mapping the function of neuronal ion channels in model and experiment. Elife [Journal] [PubMed]
Richert M, Nageswaran JM, Dutt N, Krichmar JL (2011) An efficient simulation environment for modeling large-scale cortical processing. Front Neuroinform 5:19 [Journal] [PubMed]
   Efficient simulation environment for modeling large-scale cortical processing (Richert et al. 2011) [Model]
Sterratt D, Graham B, Gillies A, Willshaw D (2011) Principles of Computational Modelling in Neuroscience, Cambridge University Press :1-401 [Journal]
   Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011) [Model]
Stewart RD, Bair W (2009) Spiking neural network simulation: numerical integration with the Parker-Sochacki method. J Comput Neurosci 27:115-33 [Journal] [PubMed]
   Numerical Integration of Izhikevich and HH model neurons (Stewart and Bair 2009) [Model]
Swietlik D, Bialowas J, Kusiak A, Cichonska D (2018) Memory and forgetting processes with the firing neuron model. Folia Morphol (Warsz) 77:221-233 [Journal] [PubMed]
van Elburg RA, van Ooyen A (2009) Generalization of the event-based Carnevale-Hines integration scheme for integrate-and-fire models. Neural Comput 21:1913-30 [Journal] [PubMed]
   Generalized Carnevale-Hines algorithm (van Elburg and van Ooyen 2009) [Model]
(83 refs)

Huguenard JP, Mccormick DA (1994) Electrophysiology of the Neuron: An Interactive Tutorial

References and models cited by this paper

References and models that cite this paper

Brown AM (2003) A modeling study predicts the presence of voltage gated Ca2+ channels on myelinated central axons. Comput Methods Programs Biomed 71:25-31 [PubMed]
   Prediction for the presence of voltage-gated Ca2+ channels in myelinated central axons (Brown 2003) [Model]
Ermentrout GB, Terman DH (2010) Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics, Antman SS:Marsden JE:Sirovich L:Wiggins, ed. pp.1 [Journal]
   Mathematical Foundations of Neuroscience (Ermentrout and Terman 2010) [Model]
Zachariou M, Alexander SP, Coombes S, Christodoulou C (2013) A biophysical model of endocannabinoid-mediated short term depression in hippocampal inhibition. PLoS One 8:e58926 [Journal] [PubMed]
(3 refs)

Zeldenrust F, Chameau P, Wadman WJ (2018) Spike and burst coding in thalamocortical relay cells. PLoS Comput Biol 14:e1005960 [PubMed]

References and models cited by this paper

References and models that cite this paper

Agüera y Arcas B, Fairhall AL (2003) What causes a neuron to spike? Neural Comput 15:1789-807 [Journal] [PubMed]
Agüera y Arcas B, Fairhall AL, Bialek W (2003) Computation in a single neuron: Hodgkin and Huxley revisited. Neural Comput 15:1715-49 [Journal] [PubMed]
Alitto HJ, Weyand TG, Usrey WM (2005) Distinct properties of stimulus-evoked bursts in the lateral geniculate nucleus. J Neurosci 25:514-23 [Journal] [PubMed]
Bialek W, de Ruyter van Steveninck RR (2005) Features and dimensions: Motion estimation in fly vision Manuscript submitted for publication
Butts DA, Desbordes G, Weng C, Jin J, Alonso JM, Stanley GB (2010) The episodic nature of spike trains in the early visual pathway. J Neurophysiol 104:3371-87 [Journal] [PubMed]
Buzsáki G (2012) How do neurons sense a spike burst? Neuron 73:857-9 [Journal] [PubMed]
Chacron MJ, Longtin A, Maler L (2004) To burst or not to burst? J Comput Neurosci 17:127-36 [Journal] [PubMed]
Clemente-Perez A, Makinson SR, Higashikubo B, Brovarney S, Cho FS, Urry A, Holden SS, Wimer M, Dávid C, Fenno LE, Acsády L, Deisseroth K, Paz JT (2017) Distinct Thalamic Reticular Cell Types Differentially Modulate Normal and Pathological Cortical Rhythms. Cell Rep 19:2130-2142 [Journal] [PubMed]
Crick F (1984) Function of the thalamic reticular complex: the searchlight hypothesis. Proc Natl Acad Sci U S A 81:4586-90 [PubMed]
Csicsvari J, Hirase H, Czurko A, Buzsáki G (1998) Reliability and state dependence of pyramidal cell-interneuron synapses in the hippocampus: an ensemble approach in the behaving rat. Neuron 21:179-89 [PubMed]
de Ruyter van Steveninck R, Bialek W (1988) Real-time performance of a movement-sensitive neuron in the blowfly visual system: Coding and information transfer in short spike sequences Proceedings Of The Royal Society Of London B 234:379-414
Denning KS, Reinagel P (2005) Visual control of burst priming in the anesthetized lateral geniculate nucleus. J Neurosci 25:3531-8 [Journal] [PubMed]
Destexhe A, Babloyantz A, Sejnowski TJ (1993) Ionic mechanisms for intrinsic slow oscillations in thalamic relay neurons. Biophys J 65:1538-52 [Journal] [PubMed]
   Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]
Destexhe A, Rudolph M, Paré D (2003) The high-conductance state of neocortical neurons in vivo. Nat Rev Neurosci 4:739-51 [Journal] [PubMed]
Destexhe A, Sejnowski TJ (1997) Synchronized oscillations in thalamic networks: insights from modeling studies Thalamus, Steriade M:Jones EG:Mccormick DA, ed. pp.331
Elijah DH, Samengo I, Montemurro MA (2015) Thalamic neuron models encode stimulus information by burst-size modulation. Front Comput Neurosci 9:113 [Journal] [PubMed]
Eyherabide HG, Rokem A, Herz AV, Samengo I (2009) Bursts generate a non-reducible spike-pattern code. Front Neurosci 3:8-14 [Journal] [PubMed]
Gabbiani F, Metzner W, Wessel R, Koch C (1996) From stimulus encoding to feature extraction in weakly electric fish. Nature 384:564-7 [Journal] [PubMed]
Gaudry KS, Reinagel P (2008) Information measure for analyzing specific spiking patterns and applications to LGN bursts. Network 19:69-94 [Journal] [PubMed]
Huguenard J, McCormick DA, Shepherd GM (1997) Electrophysiology of the Neuron, A Companion to Shepherd's Neurobiology, An Interactive Tutorial. Electrophysiology of the Neuron
   MyFirstNEURON (Houweling, Sejnowski 1997) [Model]
Hunter JD, Milton JG (2003) Amplitude and frequency dependence of spike timing: implications for dynamic regulation. J Neurophysiol 90:387-94 [Journal] [PubMed]
Izhikevich E (2006) Bursting Scholarpedia http:--www.scholarpedia.org-article-Burst :16824
Jahnsen H, Llinás R (1984) Ionic basis for the electro-responsiveness and oscillatory properties of guinea-pig thalamic neurones in vitro. J Physiol 349:227-47 [PubMed]
Jolivet R, Rauch A, Lüscher HR, Gerstner W (2006) Predicting spike timing of neocortical pyramidal neurons by simple threshold models. J Comput Neurosci 21:35-49 [Journal] [PubMed]
   Spike Response Model simulator (Jolivet et al. 2004, 2006, 2008) [Model]
Kepecs A, Lisman J (2003) Information encoding and computation with spikes and bursts. Network 14:103-18 [PubMed]
Kepecs A, Wang XJ, Lisman J (2002) Bursting neurons signal input slope. J Neurosci 22:9053-62 [PubMed]
Kistler WM, Gerstner W, van Hemmen JL (1997) Reduction of Hodgkin-Huxley equations to a single-variable threshold model. Neural Comput 9:1015-1045
Krahe R, Gabbiani F (2004) Burst firing in sensory systems. Nat Rev Neurosci 5:13-23 [Journal] [PubMed]
Lesica NA, Stanley GB (2004) Encoding of natural scene movies by tonic and burst spikes in the lateral geniculate nucleus. J Neurosci 24:10731-40 [Journal] [PubMed]
Lesica NA, Weng C, Jin J, Yeh CI, Alonso JM, Stanley GB (2006) Dynamic encoding of natural luminance sequences by LGN bursts. PLoS Biol 4:e209 [Journal] [PubMed]
Lisman JE (1997) Bursts as a unit of neural information: making unreliable synapses reliable. Trends Neurosci 20:38-43 [Journal] [PubMed]
Lytton WW, Destexhe A, Sejnowski TJ (1996) Control of slow oscillations in the thalamocortical neuron: a computer model. Neuroscience 70:673-84 [PubMed]
McCormick DA, Feeser HR (1990) Functional implications of burst firing and single spike activity in lateral geniculate relay neurons. Neuroscience 39:103-13 [PubMed]
McCormick DA, Pape HC (1990) Properties of a hyperpolarization-activated cation current and its role in rhythmic oscillation in thalamic relay neurones. J Physiol 431:291-318 [PubMed]
   Thalamic Relay Neuron: I-h (McCormick, Pape 1990) [Model]
Mease RA, Krieger P, Groh A (2014) Cortical control of adaptation and sensory relay mode in the thalamus. Proc Natl Acad Sci U S A 111:6798-803 [Journal] [PubMed]
Mease RA, Kuner T, Fairhall AL, Groh A (2017) Multiplexed Spike Coding and Adaptation in the Thalamus. Cell Rep 19:1130-1140 [Journal] [PubMed]
Miles R, Wong RK (1986) Excitatory synaptic interactions between CA3 neurones in the guinea-pig hippocampus. J Physiol 373:397-418 [PubMed]
Mitra PP,Bokil H (2008) Observed Brain Dynamics
Mukherjee P, Kaplan E (1995) Dynamics of neurons in the cat lateral geniculate nucleus: in vivo electrophysiology and computational modeling. J Neurophysiol 74:1222-43 [Journal] [PubMed]
Naud R, Gerhard F, Mensi S, Gerstner W (2011) Improved similarity measures for small sets of spike trains. Neural Comput 23:3016-69 [Journal] [PubMed]
Neske GT (2015) The Slow Oscillation in Cortical and Thalamic Networks: Mechanisms and Functions. Front Neural Circuits 9:88 [Journal] [PubMed]
Oswald AM, Chacron MJ, Doiron B, Bastian J, Maler L (2004) Parallel processing of sensory input by bursts and isolated spikes. J Neurosci 24:4351-62 [Journal] [PubMed]
Pinsky PF, Rinzel J (1994) Intrinsic and network rhythmogenesis in a reduced Traub model for CA3 neurons. J Comput Neurosci 1:39-60 [PubMed]
   CA3 pyramidal cell: rhythmogenesis in a reduced Traub model (Pinsky, Rinzel 1994) [Model]
Puil E, Gimbarzevsky B, Miura RM (1986) Quantification of membrane properties of trigeminal root ganglion neurons in guinea pigs. J Neurophysiol 55:995-1016 [Journal] [PubMed]
Puil E, Meiri H, Yarom Y (1994) Resonant behavior and frequency preferences of thalamic neurons. J Neurophysiol 71:575-82 [Journal] [PubMed]
Reinagel P, Godwin D, Sherman SM, Koch C (1999) Encoding of visual information by LGN bursts. J Neurophysiol 81:2558-69 [Journal] [PubMed]
Reinagel P, Reid RC (2000) Temporal coding of visual information in the thalamus. J Neurosci 20:5392-400 [PubMed]
Samengo I, Mato G, Elijah DH, Schreiber S, Montemurro MA (2013) Linking dynamical and functional properties of intrinsically bursting neurons. J Comput Neurosci 35:213-30 [Journal] [PubMed]
Sherman SM (2001) Tonic and burst firing: dual modes of thalamocortical relay. Trends Neurosci 24:122-6 [PubMed]
Sherman SM (2006) Thalamus Scholarpedia 1(9):1583 [Journal]
Slee SJ, Higgs MH, Fairhall AL, Spain WJ (2005) Two-dimensional time coding in the auditory brainstem. J Neurosci 25:9978-88 [Journal] [PubMed]
Smith GD, Cox CL, Sherman SM, Rinzel J (2000) Fourier analysis of sinusoidally driven thalamocortical relay neurons and a minimal integrate-and-fire-or-burst model. J Neurophysiol 83:588-610 [Journal] [PubMed]
Soltesz I, Lightowler S, Leresche N, Jassik-Gerschenfeld D, Pollard CE, Crunelli V (1991) Two inward currents and the transformation of low-frequency oscillations of rat and cat thalamocortical cells. J Physiol 441:175-97 [PubMed]
Steriade M, Llinás RR (1988) The functional states of the thalamus and the associated neuronal interplay. Physiol Rev 68:649-742 [Journal] [PubMed]
Swadlow HA, Gusev AG (2001) The impact of 'bursting' thalamic impulses at a neocortical synapse. Nat Neurosci 4:402-8 [Journal] [PubMed]
Wang X, Wei Y, Vaingankar V, Wang Q, Koepsell K, Sommer FT, Hirsch JA (2007) Feedforward excitation and inhibition evoke dual modes of firing in the cat's visual thalamus during naturalistic viewing. Neuron 55:465-78 [Journal] [PubMed]
Wang XJ (1999) Fast burst firing and short-term synaptic plasticity: a model of neocortical chattering neurons. Neuroscience 89:347-62 [PubMed]
Williams SR, Tóth TI, Turner JP, Hughes SW, Crunelli V (1997) The 'window' component of the low threshold Ca2+ current produces input signal amplification and bistability in cat and rat thalamocortical neurones. J Physiol 505 ( Pt 3):689-705 [PubMed]
Wolfart J, Debay D, Le Masson G, Destexhe A, Bal T (2005) Synaptic background activity controls spike transfer from thalamus to cortex. Nat Neurosci 8:1760-7 [Journal] [PubMed]
Xu W, Morishita W, Buckmaster PS, Pang ZP, Malenka RC, Südhof TC (2012) Distinct neuronal coding schemes in memory revealed by selective erasure of fast synchronous synaptic transmission. Neuron 73:990-1001 [Journal] [PubMed]
Yue BW, Huguenard JR (2001) The role of H-current in regulating strength and frequency of thalamic network oscillations. Thalamus Relat Syst 1:95-103 [Journal] [PubMed]
Zeldenrust F, Chameau PJ, Wadman WJ (2013) Reliability of spike and burst firing in thalamocortical relay cells. J Comput Neurosci 35:317-34 [Journal] [PubMed]
   Reliability of Morris-Lecar neurons with added T, h, and AHP currents (Zeldenrust et al. 2013) [Model]
(71 refs)