Citations for Neural Query System NQS Data-Mining From Within the NEURON Simulator (Lytton 2006)

Legends: Link to a Model Reference cited by multiple papers


Lytton WW (2006) Neural Query System: Data-mining from within the NEURON simulator. Neuroinformatics 4:163-76 [PubMed]

References and models cited by this paper

References and models that cite this paper

Ascoli GA (2002) Neuroanatomical algorithms for dendritic modelling. Network 13:247-60 [PubMed]
Ascoli GA, Krichmar JL, Nasuto SJ, Senft SL (2001) Generation, description and storage of dendritic morphology data. Philos Trans R Soc Lond B Biol Sci 356:1131-45 [Journal] [PubMed]
Ascoli GA, Krichmar JL, Scorcioni R, Nasuto SJ, Senft SL (2001) Computer generation and quantitative morphometric analysis of virtual neurons. Anat Embryol (Berl) 204:283-301 [PubMed]
Bazhenov M, Timofeev I, Steriade M, Sejnowski TJ (1998) Computational models of thalamocortical augmenting responses. J Neurosci 18:6444-65 [Journal] [PubMed]
   Thalamocortical augmenting response (Bazhenov et al 1998) [Model]
Bower JM, Beeman D (1998) The Book Of Genesis: Exploring Realistic Neural Models With The General Neural Simulation System
Chover J, Haberly LB, Lytton WW (2001) Alternating dominance of NMDA and AMPA for learning and recall: a computer model. Neuroreport 12:2503-7 [PubMed]
Davison AP, Morse TM, Migliore M, Shepherd GM, Hines ML (2004) Semi-automated population of an online database of neuronal models (ModelDB) with citation information, using PubMed for validation. Neuroinformatics 2:327-32 [Journal] [PubMed]
Galassi M, Gough B, Jungman G (2001) Gnu scientific library: Reference manual
Goddard NH, Hucka M, Howell F, Cornelis H, Shankar K, Beeman D (2001) Towards NeuroML: model description methods for collaborative modelling in neuroscience. Philos Trans R Soc Lond B Biol Sci 356:1209-28 [Journal] [PubMed]
Hines ML, Morse T, Migliore M, Carnevale NT, Shepherd GM (2004) ModelDB: A Database to Support Computational Neuroscience. J Comput Neurosci 17:7-11 [Journal] [PubMed]
Lytton WW (2002) From Computer To Brain
Poirazi P, Brannon T, Mel BW (2003) Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell. Neuron 37:977-87 [PubMed]
   CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]
Press WH, Teukolsky SA, Vellerling WT, Flannery BP (1992) Numerical Recipes In C: The Art Of Scientific Computing
Calin-Jageman RJ, Tunstall MJ, Mensh BD, Katz PS, Frost WN (2007) Parameter space analysis suggests multi-site plasticity contributes to motor pattern initiation in Tritonia. J Neurophysiol 98:2382-98 [Journal] [PubMed]
   Updated Tritonia Swim CPG (Calin-Jagemann et al. 2007) [Model]
Lytton WW, Omurtag A (2007) Tonic-clonic transitions in computer simulation. J Clin Neurophysiol 24:175-81 [Journal] [PubMed]
   Tonic-clonic transitions in a seizure simulation (Lytton and Omurtag 2007) [Model]
Lytton WW, Seidenstein AH, Dura-Bernal S, McDougal RA, Schürmann F, Hines ML (2016) Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON. Neural Comput 28:2063-90 [Journal] [PubMed]
   Parallelizing large networks in NEURON (Lytton et al. 2016) [Model]
Neymotin S, Uhlrich DJ, Manning KA, Lytton WW (2008) Data mining of time-domain features from neural extracellular field data Applic. of Comput. Intel. in Bioinf. and Biomed.: Current Trends and Open Problems 151:119-140 [Journal]
   NEURON interfaces to MySQL and the SPUD feature extraction algorithm (Neymotin et al. 2008) [Model]
Neymotin SA, Hilscher MM, Moulin TC, Skolnick Y, Lazarewicz MT, Lytton WW (2013) Ih tunes theta/gamma oscillations and cross-frequency coupling in an in silico CA3 model. PLoS One 8:e76285 [Journal] [PubMed]
   Ih tunes oscillations in an In Silico CA3 model (Neymotin et al. 2013) [Model]
Neymotin SA, Jacobs KM, Fenton AA, Lytton WW (2011) Synaptic information transfer in computer models of neocortical columns. J Comput Neurosci 30:69-84 [Journal] [PubMed]
   Synaptic information transfer in computer models of neocortical columns (Neymotin et al. 2010) [Model]
Neymotin SA, Lee H, Fenton AA, Lytton WW (2010) Interictal EEG discoordination in a rat seizure model. J Clin Neurophysiol 27:438-44 [Journal] [PubMed]
Neymotin SA, Lee H, Park E, Fenton AA, Lytton WW (2011) Emergence of physiological oscillation frequencies in a computer model of neocortex. Front Comput Neurosci 5:19 [Journal] [PubMed]
   Emergence of physiological oscillation frequencies in neocortex simulations (Neymotin et al. 2011) [Model]
(24 refs)