Bellinger SC, Miyazawa G, Steinmetz PN (2008) Submyelin potassium accumulation may functionally block subsets of local axons during deep brain stimulation: a modeling study. J Neural Eng 5:263-74 [Journal] [PubMed]

•	Submyelin Potassium accumulation in Subthalamic neuron (STN) axons (Bellinger et al. 2008) [Model]

Damodaran S, Evans RC, Blackwell KT (2014) Synchronized firing of fast-spiking interneurons is critical to maintain balanced firing between direct and indirect pathway neurons of the striatum. J Neurophysiol 111:836-48 [Journal] [PubMed]

•	Synchronicity of fast-spiking interneurons balances medium-spiny neurons (Damodaran et al. 2014) [Model]

Daneshzand M, Faezipour M, Barkana BD (2017) Hyperbolic Modeling of Subthalamic Nucleus Cells to Investigate the Effect of Dopamine Depletion. Comput Intell Neurosci 2017:5472752 [Journal] [PubMed]

•	Hyperbolic model (Daneshzand et al 2017) [Model]

Fountas Z, Shanahan M (2017) The role of cortical oscillations in a spiking neural network model of the basal ganglia. PLoS One 12:e0189109 [Journal] [PubMed]

•	Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017) [Model]

Frank MJ (2006) Hold your horses: a dynamic computational role for the subthalamic nucleus in decision making. Neural Netw 19:1120-36 [Journal] [PubMed]

•	Roles of subthalamic nucleus and DBS in reinforcement conflict-based decision making (Frank 2006) [Model]

Gillies A, Willshaw D (2006) Membrane channel interactions underlying rat subthalamic projection neuron rhythmic and bursting activity. J Neurophysiol 95:2352-65 [Journal] [PubMed]

•	Rat subthalamic projection neuron (Gillies and Willshaw 2006) [Model]

Goldberg JH, Farries MA, Fee MS (2012) Integration of cortical and pallidal inputs in the basal ganglia-recipient thalamus of singing birds. J Neurophysiol 108:1403-29 [Journal] [PubMed]

•	Thalamic neuron, zebra finch DLM: Integration of pallidal and cortical inputs (Goldberg et al. 2012) [Model]

Günay C, Edgerton JR, Jaeger D (2008) Channel density distributions explain spiking variability in the globus pallidus: a combined physiology and computer simulation database approach. J Neurosci 28:7476-91 [Journal] [PubMed]

•	Globus pallidus multi-compartmental model neuron with realistic morphology (Gunay et al. 2008) [Model]

Kotaleski JH, Plenz D, Blackwell KT (2006) Using potassium currents to solve signal-to-noise problems in inhibitory feedforward networks of the striatum. J Neurophysiol 95:331-41 [Journal] [PubMed]

•	FS Striatal interneuron: K currents solve signal-to-noise problems (Kotaleski et al 2006) [Model]

Kumaravelu K, Brocker DT, Grill WM (2016) A biophysical model of the cortex-basal ganglia-thalamus network in the 6-OHDA lesioned rat model of Parkinson's disease. J Comput Neurosci 40:207-29 [Journal] [PubMed]

•	Cortex-Basal Ganglia-Thalamus network model (Kumaravelu et al. 2016) [Model]

Leblois A, Boraud T, Meissner W, Bergman H, Hansel D (2006) Competition between feedback loops underlies normal and pathological dynamics in the basal ganglia. J Neurosci 26:3567-83 [Journal] [PubMed]

•	A dynamical model of the basal ganglia (Leblois et al 2006) [Model]

Mulcahy G, Atwood B, Kuznetsov A (2020) Basal ganglia role in learning rewarded actions and executing previously learned choices: Healthy and diseased states. PLoS One 15:e0228081 [Journal] [PubMed]

•	Cortico - Basal Ganglia Loop (Mulcahy et al 2020) [Model]

Pirini M, Rocchi L, Sensi M, Chiari L (2009) A computational modelling approach to investigate different targets in deep brain stimulation for Parkinson's disease. J Comput Neurosci 26:91-107 [Journal] [PubMed]

•	Investigation of different targets in deep brain stimulation for Parkinson`s (Pirini et al. 2009) [Model]

Rubchinsky LL, Kopell N, Sigvardt KA (2003) Modeling facilitation and inhibition of competing motor programs in basal ganglia subthalamic nucleus-pallidal circuits. Proc Natl Acad Sci U S A 100:14427-32 [Journal] [PubMed]

Salimi-Badr A, Ebadzadeh MM, Darlot C (2017) A possible correlation between the basal ganglia motor function and the inverse kinematics calculation. J Comput Neurosci 43:295-318 [Journal] [PubMed]

•	Basal ganglia motor function and the inverse kinematics calculation (Salimi-Badr et al 2017) [Model]

Salimi-Badr A, Ebadzadeh MM, Darlot C (2018) A system-level mathematical model of Basal Ganglia motor-circuit for kinematic planning of arm movements. Comput Biol Med 92:78-89 [Journal] [PubMed]

•	Basal Ganglia motor-circuit for kinematic planning of arm movements (Salimi-Badr et al 2017) [Model]

Terman D, Rubin JE, Yew AC, Wilson CJ (2002) Activity patterns in a model for the subthalamopallidal network of the basal ganglia. J Neurosci 22:2963-76 [Journal] [PubMed]

•	Optimal deep brain stimulation of the subthalamic nucleus-a computational study (Feng et al. 2007) [Model]
•	Activity patterns in a subthalamopallidal network of the basal ganglia model (Terman et al 2002) [Model]

Ursino M, Baston C (2018) Aberrant learning in Parkinson's disease: A neurocomputational study on bradykinesia. Eur J Neurosci 47:1563-1582 [Journal] [PubMed]

•	A basal ganglia model of aberrant learning (Ursino et al. 2018) [Model]