Legends: | Link to a Model | Reference cited by multiple papers |
References and models cited by this paper | References and models that cite this paper | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Baker JL, Perez-Rosello T, Migliore M, Barrionuevo G, Ascoli GA (2011) A computer model of unitary responses from associational/commissural and perforant path synapses in hippocampal CA3 pyramidal cells. J Comput Neurosci 31:137-58 [Journal] [PubMed]
Barreto E, Cressman JR (2011) Ion concentration dynamics as a mechanism for neuronal bursting. J Biol Phys 37:361-73 [Journal] [PubMed]
Beck JM, Pouget A (2007) Exact inferences in a neural implementation of a hidden Markov model. Neural Comput 19:1344-61 [Journal] [PubMed] Bittner KC, Milstein AD, Grienberger C, Romani S, Magee JC (2017) Behavioral time scale synaptic plasticity underlies CA1 place fields. Science 357:1033-1036 [Journal] [PubMed]
Booth V, Xique I, Diniz Behn C (2017) One-Dimensional Map for the Circadian Modulation of Sleep in a Sleep-Wake Regulatory Network Model for Human Sleep SIAM Journal on Applied Dynamical Systems 16:1089-1112 [Journal]
Calì C, Berger TK, Pignatelli M, Carleton A, Markram H, Giugliano M (2008) Inferring connection proximity in networks of electrically coupled cells by subthreshold frequency response analysis. J Comput Neurosci 24:330-45 [Journal] [PubMed]
Caplan JS, Williams AH, Marder E (2014) Many parameter sets in a multicompartment model oscillator are robust to temperature perturbations. J Neurosci 34:4963-75 [Journal] [PubMed]
Dudman JT, Nolan MF (2009) Stochastically gating ion channels enable patterned spike firing through activity-dependent modulation of spike probability. PLoS Comput Biol 5:e1000290 [Journal] [PubMed] Ermentrout GB, Terman DH (2010) Mathematical Foundations of Neuroscience Interdisciplinary Applied Mathematics, Antman SS:Marsden JE:Sirovich L:Wiggins, ed. pp.1 [Journal]
Esposito U, Giugliano M, van Rossum M, Vasilaki E (2014) Measuring symmetry, asymmetry and randomness in neural network connectivity. PLoS One 9:e100805 [Journal] [PubMed]
Földy C, Aradi I, Howard A, Soltesz I (2004) Diversity beyond variance: modulation of firing rates and network coherence by GABAergic subpopulations. Eur J Neurosci 19:119-30 [PubMed] Fountas Z, Shanahan M (2017) The role of cortical oscillations in a spiking neural network model of the basal ganglia. PLoS One 12:e0189109 [Journal] [PubMed]
Girard B, Tabareau N, Pham QC, Berthoz A, Slotine JJ (2008) Where neuroscience and dynamic system theory meet autonomous robotics: a contracting basal ganglia model for action selection. Neural Netw 21:628-41 [Journal] [PubMed]
Giugliano M, Gambazzi L, Ballerini L, Prato M, Campidelli S (2012) Carbon nanotubes as electrical interfaces to neurons Nanotechnology for Biology and Medicine, Parpura V, Silva GA, ed. pp.187 [Journal]
Gloveli T, Dugladze T, Rotstein HG, Traub RD, Monyer H, Heinemann U, Whittington MA, Kopell NJ (2005) Orthogonal arrangement of rhythm-generating microcircuits in the hippocampus. Proc Natl Acad Sci U S A 102:13295-300 [Journal] [PubMed]
Goldberg DH, Andreou AG (2007) Distortion of neural signals by spike coding. Neural Comput 19:2797-839 [Journal] [PubMed] Goldwyn JH, Imennov NS, Famulare M, Shea-Brown E (2011) Stochastic differential equation models for ion channel noise in Hodgkin-Huxley neurons. Phys Rev E Stat Nonlin Soft Matter Phys 83:041908 [Journal] [PubMed]
Goldwyn JH, Shea-Brown E (2011) The what and where of adding channel noise to the Hodgkin-Huxley equations. PLoS Comput Biol 7:e1002247 [Journal] [PubMed]
Humphries MD, Gurney K (2007) Solution methods for a new class of simple model neurons. Neural Comput 19:3216-25 [Journal] [PubMed] Huys QJ, Paninski L (2009) Smoothing of, and parameter estimation from, noisy biophysical recordings. PLoS Comput Biol 5:e1000379 [Journal] [PubMed]
Jolivet R, Lewis TJ, Gerstner W (2004) Generalized integrate-and-fire models of neuronal activity approximate spike trains of a detailed model to a high degree of accuracy. J Neurophysiol 92:959-76 [Journal] [PubMed]
Kerr CC, Van Albada SJ, Neymotin SA, Chadderdon GL, Robinson PA, Lytton WW (2013) Cortical information flow in Parkinson's disease: a composite network/field model. Front Comput Neurosci 7:39 [Journal] [PubMed]
Kilinc D, Demir A (2017) Noise in Neuronal and Electronic Circuits: A General Modeling Framework and Non-Monte Carlo Simulation Techniques. IEEE Trans Biomed Circuits Syst 11:958-974 [Journal] [PubMed]
Kilinc D, Demir A (2018) Spike timing precision of neuronal circuits. J Comput Neurosci 44:341-362 [Journal] [PubMed]
Kilinc D,Demir A (2015) Simulation of noise in neurons and neuronal circuits Proceedings of the IEEE/ACM international conference on computer-aided design (ICCAD) :589-596 [Journal]
Kim H, Bao S (2008) Distributed representation of perceptual categories in the auditory cortex. J Comput Neurosci 24:277-90 [Journal] [PubMed]
Kim J, Leahy W, Shlizerman E (2019) Neural Interactome: Interactive Simulation of a Neuronal System. Front Comput Neurosci 13:8 [Journal] [PubMed]
Kumar A, Schrader S, Aertsen A, Rotter S (2008) The high-conductance state of cortical networks. Neural Comput 20:1-43 [Journal] [PubMed] Laing CR, Longtin A (2003) Dynamics of deterministic and stochastic paired excitatory-inhibitory delayed feedback. Neural Comput 15:2779-822 [Journal] [PubMed] Lian Y, Grayden DB, Kameneva T, Meffin H, Burkitt AN (2019) Toward a Biologically Plausible Model of LGN-V1 Pathways Based on Efficient Coding Frontiers in Neural Circuits 13:13 [Journal]
Linaro D, Ocker GK, Doiron B, Giugliano M (2019) Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro. J Neurosci 39:7648-7663 [Journal] [PubMed]
Linaro D, Storace M, Giugliano M (2011) Accurate and fast simulation of channel noise in conductance-based model neurons by diffusion approximation. PLoS Comput Biol 7:e1001102 [Journal] [PubMed]
Lundstrom BN, Famulare M, Sorensen LB, Spain WJ, Fairhall AL (2009) Sensitivity of firing rate to input fluctuations depends on time scale separation between fast and slow variables in single neurons J Comput Neurosci [Journal]
Machens CK, Brody CD (2008) Design of continuous attractor networks with monotonic tuning using a symmetry principle. Neural Comput 20:452-85 [Journal] [PubMed] Maia PD, Kutz JN (2014) Compromised axonal functionality after neurodegeneration, concussion and/or traumatic brain injury. J Comput Neurosci 37:317-32 [Journal] [PubMed] Masuda N, Okada M, Aihara K (2007) Filtering of spatial bias and noise inputs by spatially structured neural networks. Neural Comput 19:1854-70 [Journal] [PubMed] Monaco JD, Knierim JJ, Zhang K (2011) Sensory feedback, error correction, and remapping in a multiple oscillator model of place cell activity Frontiers in Computational Neuroscience 5(0):39 [Journal] [PubMed]
Moradi K, Moradi K, Ganjkhani M, Hajihasani M, Gharibzadeh S, Kaka G (2013) A fast model of voltage-dependent NMDA receptors. J Comput Neurosci 34:521-31 [Journal] [PubMed]
Muller E, Buesing L, Schemmel J, Meier K (2007) Spike-frequency adapting neural ensembles: beyond mean adaptation and renewal theories. Neural Comput 19:2958-3010 [Journal] [PubMed] Muresan RC, Savin C (2007) Resonance or integration? Self-sustained dynamics and excitability of neural microcircuits. J Neurophysiol 97:1911-30 [Journal] [PubMed] Norheim ES, Wyller J, Nordlie E, Einevoll GT (2012) A minimal mechanistic model for temporal signal processing in the lateral geniculate nucleus. Cogn Neurodyn 6:259-81 [Journal] [PubMed]
Paninski L (2006) The spike-triggered average of the integrate-and-fire cell driven by gaussian white noise. Neural Comput 18:2592-616 [Journal] [PubMed] Paninski L, Pillow JW, Simoncelli EP (2004) Maximum likelihood estimation of a stochastic integrate-and-fire neural encoding model. Neural Comput 16:2533-61 [Journal] [PubMed] Rakowski F, Karbowski J (2017) Optimal synaptic signaling connectome for locomotory behavior in Caenorhabditis elegans: Design minimizing energy cost. PLoS Comput Biol 13:e1005834 [Journal] [PubMed]
Rössert C, Moore LE, Straka H, Glasauer S (2011) Cellular and network contributions to vestibular signal processing: impact of ion conductances, synaptic inhibition, and noise. J Neurosci 31:8359-72 [Journal] [PubMed]
Rössert C, Solinas S, D'Angelo E, Dean P, Porrill J (2014) Model cerebellar granule cells can faithfully transmit modulated firing rate signals. Front Cell Neurosci 8:304 [Journal] [PubMed]
Sakai Y, Fukai T (2008) The actor-critic learning is behind the matching law: matching versus optimal behaviors. Neural Comput 20:227-51 [Journal] [PubMed] Salazar-Gatzimas E, Chen J, Creamer MS, Mano O, Mandel HB, Matulis CA, Pottackal J, Clark DA (2016) Direct Measurement of Correlation Responses in Drosophila Elementary Motion Detectors Reveals Fast Timescale Tuning. Neuron 92:227-239 [Journal] [PubMed]
Shimazaki H, Shinomoto S (2007) A method for selecting the bin size of a time histogram. Neural Comput 19:1503-27 [Journal] [PubMed] Sterratt D, Graham B, Gillies A, Willshaw D (2011) Principles of Computational Modelling in Neuroscience, Cambridge University Press :1-401 [Journal]
Tejada J, Arisi GM, García-Cairasco N, Roque AC (2012) Morphological alterations in newly born dentate gyrus granule cells that emerge after status epilepticus contribute to make them less excitable. PLoS One 7:e40726 [Journal] [PubMed]
Teka W, Marinov TM, Santamaria F (2014) Neuronal spike timing adaptation described with a fractional leaky integrate-and-fire model. PLoS Comput Biol 10:e1003526 [Journal] [PubMed]
Tikidji-Hamburyan RA, Narayana V, Bozkus Z, El-Ghazawi TA (2017) Software for Brain Network Simulations: A Comparative Study Front. Neuroinform. [Journal]
Tomov P, Pena RF, Zaks MA, Roque AC (2014) Sustained oscillations, irregular firing, and chaotic dynamics in hierarchical modular networks with mixtures of electrophysiological cell types. Front Comput Neurosci 8:103 [Journal] [PubMed]
Toyoizumi T, Pfister JP, Aihara K, Gerstner W (2007) Optimality model of unsupervised spike-timing-dependent plasticity: synaptic memory and weight distribution. Neural Comput 19:639-71 [Journal] [PubMed] Triesch J (2007) Synergies between intrinsic and synaptic plasticity mechanisms. Neural Comput 19:885-909 [Journal] [PubMed] van Elburg RA, van Ooyen A (2010) Impact of dendritic size and dendritic topology on burst firing in pyramidal cells. PLoS Comput Biol 6:e1000781 [Journal] [PubMed]
Vasilaki E, Giugliano M (2014) Emergence of connectivity motifs in networks of model neurons with short- and long-term plastic synapses. PLoS One 9:e84626 [Journal] [PubMed]
Vogelstein RJ, Mallik U, Culurciello E, Cauwenberghs G, Etienne-Cummings R (2007) A multichip neuromorphic system for spike-based visual information processing. Neural Comput 19:2281-300 [Journal] [PubMed] Zachariou M, Alexander SP, Coombes S, Christodoulou C (2013) A biophysical model of endocannabinoid-mediated short term depression in hippocampal inhibition. PLoS One 8:e58926 [Journal] [PubMed] |