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Reference cited by multiple papers

Hepburn I, Chen W, Wils S, De Schutter E (2012) STEPS: efficient simulation of stochastic reaction-diffusion models in realistic morphologies. BMC Syst Biol 6:36 [PubMed]

References and models cited by this paper

References and models that cite this paper

Anwar H, Hepburn I, Nedelescu H, Chen W, De Schutter E (2013) Stochastic calcium mechanisms cause dendritic calcium spike variability. J Neurosci 33:15848-67 [Journal] [PubMed]

•	Stochastic calcium mechanisms cause dendritic calcium spike variability (Anwar et al. 2013) [Model]

Anwar H, Roome CJ, Nedelescu H, Chen W, Kuhn B, De Schutter E (2014) Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Front Cell Neurosci 8:168 [Journal] [PubMed]

•	Calcium dynamics depend on dendritic diameters (Anwar et al. 2014) [Model]

Chen W, De Schutter E (2014) Python-based geometry preparation and simulation visualization toolkits for STEPS. Front Neuroinform 8:37 [Journal] [PubMed]

•	Python-based toolkits for STEPS (Chen and De Schutter 2014) [Model]

Chen W, De Schutter E (2017) Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. Front Neuroinform 11:13 [Journal] [PubMed]

•	Parallel STEPS: Large scale stochastic spatial reaction-diffusion simulat. (Chen & De Schutter 2017) [Model]

Denizot A, Arizono M, Nägerl UV, Soula H, Berry H (2019) Simulation of calcium signaling in fine astrocytic processes: Effect of spatial properties on spontaneous activity. PLoS Comput Biol 15:e1006795 [Journal] [PubMed]

•	Simulation of calcium signaling in fine astrocytic processes (Denizot et al 2019) [Model]

Hepburn I, Jain A, Gangal H, Yamamoto Y, Tanaka-Yamamoto K, De Schutter E (2017) A model of induction of cerebellar Long-Term Depression including RKIP inactivation of Raf and MEK Frontiers in Molecular Neuroscience [Journal]

•	A model of cerebellar LTD including RKIP inactivation of Raf and MEK (Hepburn et al 2017) [Model]

Hituri K, Linne ML (2013) Comparison of models for IP3 receptor kinetics using stochastic simulations. PLoS One 8:e59618 [Journal] [PubMed]

•	IP3R model comparison (Hituri and Linne 2013) [Model]

Tikidji-Hamburyan RA, Narayana V, Bozkus Z, El-Ghazawi TA (2017) Software for Brain Network Simulations: A Comparative Study Front. Neuroinform. [Journal]

•	Brain networks simulators - a comparative study (Tikidji-Hamburyan et al 2017) [Model]

Zamora Chimal CG, De Schutter E (2018) Ca2+ Requirements for Long-Term Depression Are Frequency Sensitive in Purkinje Cells. Front Mol Neurosci 11:438 [Journal] [PubMed]

•	Ca2+ requirements for Long-Term Depression in Purkinje Cells (Criseida Zamora et al 2018) [Model]

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