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Hepburn I, Chen W, Wils S, De Schutter E (2012) STEPS: efficient simulation of stochastic reaction-diffusion models in realistic morphologies. BMC Syst Biol 6:36 [PubMed]

References and models cited by this paper

References and models that cite this paper

Anwar H, Roome CJ, Nedelescu H, Chen W, Kuhn B, De Schutter E (2014) Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Front Cell Neurosci 8:168 [Journal] [PubMed]
  • Calcium dynamics depend on dendritic diameters (Anwar et al. 2014) [Model]
Chen W, De Schutter E (2014) Python-based geometry preparation and simulation visualization toolkits for STEPS. Front Neuroinform 8:37 [Journal] [PubMed]
  • Python-based toolkits for STEPS (Chen and De Schutter 2014) [Model]
Chen W, De Schutter E (2017) Parallel STEPS: Large Scale Stochastic Spatial Reaction-Diffusion Simulation with High Performance Computers. Front Neuroinform 11:13 [Journal] [PubMed]
  • Parallel STEPS: Large scale stochastic spatial reaction-diffusion simulat. (Chen & De Schutter 2017) [Model]
Hepburn I, Jain A, Gangal H, Yamamoto Y, Tanaka-Yamamoto K, De Schutter E (2017) A model of induction of cerebellar Long-Term Depression including RKIP inactivation of Raf and MEK Frontiers in Molecular Neuroscience [Journal]
  • A model of cerebellar LTD including RKIP inactivation of Raf and MEK (Hepburn et al 2017) [Model]
Hituri K, Linne ML (2013) Comparison of models for IP3 receptor kinetics using stochastic simulations. PLoS One 8:e59618 [Journal] [PubMed]
  • IP3R model comparison (Hituri and Linne 2013) [Model]
Zamora Chimal CG, De Schutter E (2018) Ca2+ Requirements for Long-Term Depression Are Frequency Sensitive in Purkinje Cells. Front Mol Neurosci 11:438 [Journal] [PubMed]
  • Ca2+ requirements for Long-Term Depression in Purkinje Cells (Criseida Zamora et al 2018) [Model]
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