Citation Relationships

Legends: Link to a Model Reference cited by multiple papers

De Pittà M, Goldberg M, Volman V, Berry H, Ben-Jacob E (2009) Glutamate regulation of calcium and IP3 oscillating and pulsating dynamics in astrocytes. J Biol Phys 35:383-411 [PubMed]

   Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017)

References and models cited by this paper

References and models that cite this paper

Abe T, Sugihara H, Nawa H, Shigemoto R, Mizuno N, Nakanishi S (1992) Molecular characterization of a novel metabotropic glutamate receptor mGluR5 coupled to inositol phosphate/Ca2+ signal transduction. J Biol Chem 267:13361-8 [PubMed]
Allen V, Swigart P, Cheung R, Cockcroft S, Katan M (1997) Regulation of inositol lipid-specific phospholipase cdelta by changes in Ca2+ ion concentrations. Biochem J 327 ( Pt 2):545-52 [PubMed]
Araque A, Parpura V, Sanzgiri RP, Haydon PG (1998) Glutamate-dependent astrocyte modulation of synaptic transmission between cultured hippocampal neurons. Eur J Neurosci 10:2129-42 [PubMed]
Balázsi G, Cornell-Bell AH, Moss F (2003) Increased phase synchronization of spontaneous calcium oscillations in epileptic human versus normal rat astrocyte cultures. Chaos 13:515-8 [Journal] [PubMed]
Bernardinelli Y, Magistretti PJ, Chatton JY (2004) Astrocytes generate Na+-mediated metabolic waves. Proc Natl Acad Sci U S A 101:14937-42 [Journal] [PubMed]
Berridge MJ (1990) Calcium oscillations. J Biol Chem 265:9583-6
Berridge MJ (1993) Inositol trisphosphate and calcium signalling. Nature 361:315-25 [Journal] [PubMed]
Berridge MJ (1997) The AM and FM of calcium signalling. Nature 386:759-60 [Journal] [PubMed]
Berridge MJ, Bootman MD, Lipp P (1998) Calcium--a life and death signal. Nature 395:645-8 [Journal] [PubMed]
Berridge MJ, Lipp P, Bootman MD (2000) The versatility and universality of calcium signalling. Nat Rev Mol Cell Biol 1:11-21 [Journal] [PubMed]
Bezprozvanny I, Watras J, Ehrlich BE (1991) Bell-shaped calcium-response curves of Ins(1,4,5)P3- and calcium-gated channels from endoplasmic reticulum of cerebellum. Nature 351:751-4 [Journal] [PubMed]
Carafoli E (2002) Calcium signaling: a tale for all seasons. Proc Natl Acad Sci U S A 99:1115-22 [Journal] [PubMed]
Carmignoto G (2000) Reciprocal communication systems between astrocytes and neurones. Prog Neurobiol 62:561-81 [PubMed]
Charles A (1998) Intercellular calcium waves in glia. Glia 24:39-49 [PubMed]
Chay T,Fan YS,Lee SY (1995) Bursting, spiking, chaos, fractals and universality in biological rhythms Int. J. Bifurcat. Chaos 5:595-635 [Journal]
Chay TR, Lee YS, Fan YS (1995) Appearance of phase-locked Wenckebach-like rhythms, devil's staircase and universality in intracellular calcium spikes in non-excitable cell models. J Theor Biol 174:21-44 [Journal] [PubMed]
Codazzi F, Teruel MN, Meyer T (2001) Control of astrocyte Ca(2+) oscillations and waves by oscillating translocation and activation of protein kinase C. Curr Biol 11:1089-97 [PubMed]
Communi D, Dewaste V, Erneux C (1999) Calcium-calmodulin-dependent protein kinase II and protein kinase C-mediated phosphorylation and activation of D-myo-inositol 1,4, 5-trisphosphate 3-kinase B in astrocytes. J Biol Chem 274:14734-42 [PubMed]
Communi D, Gevaert K, Demol H, Vandekerckhove J, Erneux C (2001) A novel receptor-mediated regulation mechanism of type I inositol polyphosphate 5-phosphatase by calcium/calmodulin-dependent protein kinase II phosphorylation. J Biol Chem 276:38738-47 [Journal] [PubMed]
Communi D, Vanweyenberg V, Erneux C (1995) Molecular study and regulation of D-myo-inositol 1,4,5-trisphosphate 3-kinase. Cell Signal 7:643-50 [PubMed]
Communi D, Vanweyenberg V, Erneux C (1997) D-myo-inositol 1,4,5-trisphosphate 3-kinase A is activated by receptor activation through a calcium:calmodulin-dependent protein kinase II phosphorylation mechanism. EMBO J 16:1943-52 [Journal] [PubMed]
Cornell-Bell AH, Finkbeiner SM, Cooper MS, Smith SJ (1990) Glutamate induces calcium waves in cultured astrocytes: long-range glial signaling. Science 247:470-3 [PubMed]
Cuthbertson KS, Chay TR (1991) Modelling receptor-controlled intracellular calcium oscillators. Cell Calcium 12:97-109 [PubMed]
Dani JW, Chernjavsky A, Smith SJ (1992) Neuronal activity triggers calcium waves in hippocampal astrocyte networks. Neuron 8:429-40 [PubMed]
De Koninck P, Schulman H (1998) Sensitivity of CaM kinase II to the frequency of Ca2+ oscillations. Science 279:227-30 [PubMed]
De Pittà M, Volman V, Levine H, Ben-Jacob E (2009) Multimodal encoding in a simplified model of intracellular calcium signaling. Cogn Process 10 Suppl 1:S55-70 [Journal] [PubMed]
De Pittà M, Volman V, Levine H, Pioggia G, De Rossi D, Ben-Jacob E (2008) Coexistence of amplitude and frequency modulations in intracellular calcium dynamics. Phys Rev E Stat Nonlin Soft Matter Phys 77:030903 [Journal] [PubMed]
De Young GW, Keizer J (1992) A single-pool inositol 1,4,5-trisphosphate-receptor-based model for agonist-stimulated oscillations in Ca2+ concentration. Proc Natl Acad Sci U S A 89:9895-9 [PubMed]
Delvaux A, Lemos M, Moreau C, Erneux C (1990) Regeneration of enzymatic activity after sodium dodecyl sulfate/polyacrylamide gel electrophoresis and zinc acetate staining: the example of inositol 1,4,5-trisphosphate 5-phosphatase. Anal Biochem 188:219-21 [PubMed]
Dupont G, Erneux C (1997) Simulations of the effects of inositol 1,4,5-trisphosphate 3-kinase and 5-phosphatase activities on Ca2+ oscillations. Cell Calcium 22:321-31 [PubMed]
Dupont G, Goldbeter A (1993) One-pool model for Ca2+ oscillations involving Ca2+ and inositol 1,4,5-trisphosphate as co-agonists for Ca2+ release. Cell Calcium 14:311-22 [PubMed]
Essen LO, Perisic O, Cheung R, Katan M, Williams RL (1996) Crystal structure of a mammalian phosphoinositide-specific phospholipase C delta. Nature 380:595-602 [Journal] [PubMed]
Essen LO, Perisic O, Lynch DE, Katan M, Williams RL (1997) A ternary metal binding site in the C2 domain of phosphoinositide-specific phospholipase C-delta1. Biochemistry 36:2753-62 [Journal] [PubMed]
Evanko DS,Sul JY,Zhang Q,Haydon PG (2004) The regulated release of transmitters from astrocytes Glial–neuronal Signaling, Hatton GI:Parpura V, ed. pp.397
Falcke M (2003) On the role of stochastic channel behavior in intracellular Ca2+ dynamics. Biophys J 84:42-56 [Journal] [PubMed]
Falcke M (2004) Reading the patterns in living cells-the physics of Ca2+ signaling Advances In Physics 53:255-440
Fellin T, Carmignoto G (2004) Neurone-to-astrocyte signalling in the brain represents a distinct multifunctional unit. J Physiol 559:3-15 [Journal] [PubMed]
Fellin T, Pascual O, Gobbo S, Pozzan T, Haydon PG, Carmignoto G (2004) Neuronal synchrony mediated by astrocytic glutamate through activation of extrasynaptic NMDA receptors. Neuron 43:729-43 [Journal] [PubMed]
Finkbeiner SM (1993) Glial calcium. Glia 9:83-104 [Journal] [PubMed]
Fisher SK (1995) Homologous and heterologous regulation of receptor-stimulated phosphoinositide hydrolysis. Eur J Pharmacol 288:231-50 [PubMed]
Foskett JK, Roifman CM, Wong D (1991) Activation of calcium oscillations by thapsigargin in parotid acinar cells. J Biol Chem 266:2778-82 [PubMed]
Gallo V, Ghiani CA (2000) Glutamate receptors in glia: new cells, new inputs and new functions. Trends Pharmacol Sci 21:252-8 [PubMed]
Hanson PI, Meyer T, Stryer L, Schulman H (1994) Dual role of calmodulin in autophosphorylation of multifunctional CaM kinase may underlie decoding of calcium signals. Neuron 12:943-56 [PubMed]
Hirose K, Kadowaki S, Tanabe M, Takeshima H, Iino M (1999) Spatiotemporal dynamics of inositol 1,4,5-trisphosphate that underlies complex Ca2+ mobilization patterns. Science 284:1527-30 [PubMed]
Höfer T, Venance L, Giaume C (2002) Control and plasticity of intercellular calcium waves in astrocytes: a modeling approach. J Neurosci 22:4850-9 [PubMed]
Iino M (1990) Biphasic Ca2+ dependence of inositol 1,4,5-trisphosphate-induced Ca release in smooth muscle cells of the guinea pig taenia caeci. J Gen Physiol 95:1103-22 [PubMed]
Irvine RF, Letcher AJ, Heslop JP, Berridge MJ (1986) The inositol tris/tetrakisphosphate pathway--demonstration of Ins(1,4,5)P3 3-kinase activity in animal tissues. Nature 320:631-4 [Journal] [PubMed]
Jaffe LF (1993) Classes and mechanisms of calcium waves. Cell Calcium 14:736-45 [PubMed]
Kawabata S, Tsutsumi R, Kohara A, Yamaguchi T, Nakanishi S, Okada M (1996) Control of calcium oscillations by phosphorylation of metabotropic glutamate receptors. Nature 383:89-92 [Journal] [PubMed]
Kazantsev VB (2009) Spontaneous calcium signals induced by gap junctions in a network model of astrocytes. Phys Rev E Stat Nonlin Soft Matter Phys 79:010901 [Journal] [PubMed]
Keizer J, Li YX, Stojilkovic S, Rinzel J (1995) InsP3-induced Ca2+ excitability of the endoplasmic reticulum. Mol Biol Cell 6:945-51 [PubMed]
Kolodziej SJ, Hudmon A, Waxham MN, Stoops JK (2000) Three-dimensional reconstructions of calcium/calmodulin-dependent (CaM) kinase IIalpha and truncated CaM kinase IIalpha reveal a unique organization for its structural core and functional domains. J Biol Chem 275:14354-9 [PubMed]
Li YX, Rinzel J (1994) Equations for InsP3 receptor-mediated [Ca2+]i oscillations derived from a detailed kinetic model: a Hodgkin-Huxley like formalism. J Theor Biol 166:461-73 [Journal] [PubMed]
Li YX, Rinzel J, Keizer J, Stojilkovic SS (1994) Calcium oscillations in pituitary gonadotrophs: comparison of experiment and theory. Proc Natl Acad Sci U S A 91:58-62 [PubMed]
Lytton J, Westlin M, Burk SE, Shull GE, MacLennan DH (1992) Functional comparisons between isoforms of the sarcoplasmic or endoplasmic reticulum family of calcium pumps. J Biol Chem 267:14483-9 [PubMed]
Masu M, Tanabe Y, Tsuchida K, Shigemoto R, Nakanishi S (1991) Sequence and expression of a metabotropic glutamate receptor. Nature 349:760-5 [Journal] [PubMed]
Meyer T, Stryer L (1988) Molecular model for receptor-stimulated calcium spiking. Proc Natl Acad Sci U S A 85:5051-5 [PubMed]
Mishra J, Bhalla US (2002) Simulations of inositol phosphate metabolism and its interaction with InsP(3)-mediated calcium release. Biophys J 83:1298-316 [Journal] [PubMed]
Montana V, Malarkey EB, Verderio C, Matteoli M, Parpura V (2006) Vesicular transmitter release from astrocytes. Glia 54:700-15 [Journal] [PubMed]
Nash MS, Young KW, Challiss RA, Nahorski SR (2001) Intracellular signalling. Receptor-specific messenger oscillations. Nature 413:381-2 [Journal] [PubMed]
Nett WJ, Oloff SH, McCarthy KD (2002) Hippocampal astrocytes in situ exhibit calcium oscillations that occur independent of neuronal activity. J Neurophysiol 87:528-37 [Journal] [PubMed]
Nishizuka Y (1995) Protein kinase C and lipid signaling for sustained cellular responses. FASEB J 9:484-96 [PubMed]
Parpura V (2004) Glutamate-mediated bi-directional signaling between neurons and astrocytes Glial–neuronal Signaling, Hatton GI:Parpura V, ed. pp.365
Parpura V, Basarsky TA, Liu F, Jeftinija K, Jeftinija S, Haydon PG (1994) Glutamate-mediated astrocyte-neuron signalling. Nature 369:744-7 [Journal] [PubMed]
Pasti L, Volterra A, Pozzan T, Carmignoto G (1997) Intracellular calcium oscillations in astrocytes: a highly plastic, bidirectional form of communication between neurons and astrocytes in situ. J Neurosci 17:7817-30 [PubMed]
Pawelczyk T, Matecki A (1997) Structural requirements of phospholipase C delta1 for regulation by spermine, sphingosine and sphingomyelin. Eur J Biochem 248:459-65 [PubMed]
Perea G, Araque A (2005) Synaptic regulation of the astrocyte calcium signal. J Neural Transm (Vienna) 112:127-35 [Journal] [PubMed]
Perea G, Araque A (2005) Properties of synaptically evoked astrocyte calcium signal reveal synaptic information processing by astrocytes. J Neurosci 25:2192-203 [Journal] [PubMed]
Politi A, Gaspers LD, Thomas AP, Höfer T (2006) Models of IP3 and Ca2+ oscillations: frequency encoding and identification of underlying feedbacks. Biophys J 90:3120-33 [Journal] [PubMed]
Porter JT, McCarthy KD (1996) Hippocampal astrocytes in situ respond to glutamate released from synaptic terminals. J Neurosci 16:5073-81 [PubMed]
Rebecchi MJ, Pentyala SN (2000) Structure, function, and control of phosphoinositide-specific phospholipase C. Physiol Rev 80:1291-335 [Journal] [PubMed]
Rhee SG (2001) Regulation of phosphoinositide-specific phospholipase C. Annu Rev Biochem 70:281-312 [Journal] [PubMed]
Rhee SG, Bae YS (1997) Regulation of phosphoinositide-specific phospholipase C isozymes. J Biol Chem 272:15045-8 [PubMed]
Rooney TA, Renard DC, Sass EJ, Thomas AP (1991) Oscillatory cytosolic calcium waves independent of stimulated inositol 1,4,5-trisphosphate formation in hepatocytes. J Biol Chem 266:12272-82 [PubMed]
Ryu SH, Kim UH, Wahl MI, Brown AB, Carpenter G, Huang KP, Rhee SG (1990) Feedback regulation of phospholipase C-beta by protein kinase C. J Biol Chem 265:17941-5 [PubMed]
Seifert G, Hüttmann K, Schramm J, Steinhäuser C (2004) Enhanced relative expression of glutamate receptor 1 flip AMPA receptor subunits in hippocampal astrocytes of epilepsy patients with Ammon's horn sclerosis. J Neurosci 24:1996-2003 [Journal] [PubMed]
Sejnowski TJ, Paulsen O (2006) Network oscillations: emerging computational principles. J Neurosci 26:1673-6 [Journal] [PubMed]
Shinomura T, Asaoka Y, Oka M, Yoshida K, Nishizuka Y (1991) Synergistic action of diacylglycerol and unsaturated fatty acid for protein kinase C activation: its possible implications. Proc Natl Acad Sci U S A 88:5149-53 [PubMed]
Shrier A, Dubarsky H, Rosengarten M, Guevara MR, Nattel S, Glass L (1987) Prediction of complex atrioventricular conduction rhythms in humans with use of the atrioventricular nodal recovery curve. Circulation 76:1196-205 [PubMed]
Sim SS, Kim JW, Rhee SG (1990) Regulation of D-myo-inositol 1,4,5-trisphosphate 3-kinase by cAMP-dependent protein kinase and protein kinase C. J Biol Chem 265:10367-72 [PubMed]
Sims CE, Allbritton NL (1998) Metabolism of inositol 1,4,5-trisphosphate and inositol 1,3,4,5-tetrakisphosphate by the oocytes of Xenopus laevis. J Biol Chem 273:4052-8 [PubMed]
Skupin A, Falcke M (2007) Statistical properties and information content of calcium oscillations. Genome Inform 18:44-53 [PubMed]
Skupin A, Kettenmann H, Winkler U, Wartenberg M, Sauer H, Tovey SC, Taylor CW, Falcke M (2008) How does intracellular Ca2+ oscillate: by chance or by the clock? Biophys J 94:2404-11 [Journal] [PubMed]
Sneyd J, Wetton BT, Charles AC, Sanderson MJ (1995) Intercellular calcium waves mediated by diffusion of inositol trisphosphate: a two-dimensional model. Am J Physiol 268:C1537-45 [Journal] [PubMed]
Stout CE, Costantin JL, Naus CC, Charles AC (2002) Intercellular calcium signaling in astrocytes via ATP release through connexin hemichannels. J Biol Chem 277:10482-8 [Journal] [PubMed]
Stryer L (1999) Biochemistry
Suzuki Y, Moriyoshi E, Tsuchiya D, Jingami H (2004) Negative cooperativity of glutamate binding in the dimeric metabotropic glutamate receptor subtype 1. J Biol Chem 279:35526-34 [Journal] [PubMed]
Tang Y, Othmer HG (1995) Frequency encoding in excitable systems with applications to calcium oscillations. Proc Natl Acad Sci U S A 92:7869-73 [PubMed]
Teichberg VI (1991) Glial glutamate receptors: likely actors in brain signaling. FASEB J 5:3086-91 [PubMed]
Thiel G, Czernik AJ, Gorelick F, Nairn AC, Greengard P (1988) Ca2+/calmodulin-dependent protein kinase II: identification of threonine-286 as the autophosphorylation site in the alpha subunit associated with the generation of Ca2+-independent activity. Proc Natl Acad Sci U S A 85:6337-41 [PubMed]
Togashi S, Takazawa K, Endo T, Erneux C, Onaya T (1997) Structural identification of the myo-inositol 1,4,5-trisphosphate-binding domain in rat brain inositol 1,4,5-trisphosphate 3-kinase. Biochem J 326 ( Pt 1):221-5 [PubMed]
Tsodyks MV, Markram H (1997) The neural code between neocortical pyramidal neurons depends on neurotransmitter release probability. Proc Natl Acad Sci U S A 94:719-23 [PubMed]
Uhlhaas PJ, Singer W (2006) Neural synchrony in brain disorders: relevance for cognitive dysfunctions and pathophysiology. Neuron 52:155-68 [Journal] [PubMed]
Verjans B, Lecocq R, Moreau C, Erneux C (1992) Purification of bovine brain inositol-1,4,5-trisphosphate 5-phosphatase. Eur J Biochem 204:1083-7 [PubMed]
Verkhratsky A, Kettenmann H (1996) Calcium signalling in glial cells. Trends Neurosci 19:346-52 [PubMed]
Volman V, Ben-Jacob E, Levine H (2007) The astrocyte as a gatekeeper of synaptic information transfer. Neural Comput 19:303-26 [Journal] [PubMed]
Volterra A, Meldolesi J (2005) Astrocytes, from brain glue to communication elements: the revolution continues. Nat Rev Neurosci 6:626-40 [Journal] [PubMed]
Wang X, Lou N, Xu Q, Tian GF, Peng WG, Han X, Kang J, Takano T, Nedergaard M (2006) Astrocytic Ca2+ signaling evoked by sensory stimulation in vivo. Nat Neurosci 9:816-23 [Journal] [PubMed]
Woods NM, Cuthbertson KS, Cobbold PH (1986) Repetitive transient rises in cytoplasmic free calcium in hormone-stimulated hepatocytes. Nature 319:600-2 [Journal] [PubMed]
Young KW, Nash MS, Challiss RA, Nahorski SR (2003) Role of Ca2+ feedback on single cell inositol 1,4,5-trisphosphate oscillations mediated by G-protein-coupled receptors. J Biol Chem 278:20753-60 [Journal] [PubMed]
Zhang BX, Zhao H, Muallem S (1993) Ca(2+)-dependent kinase and phosphatase control inositol 1,4,5-trisphosphate-mediated Ca2+ release. Modification by agonist stimulation. J Biol Chem 268:10997-1001 [PubMed]
Zonta M, Carmignoto G (2002) Calcium oscillations encoding neuron-to-astrocyte communication. J Physiol Paris 96:193-8 [PubMed]
Zur Nieden R, Deitmer JW (2006) The role of metabotropic glutamate receptors for the generation of calcium oscillations in rat hippocampal astrocytes in situ. Cereb Cortex 16:676-87 [Journal] [PubMed]
Denizot A, Arizono M, Nägerl UV, Soula H, Berry H (2019) Simulation of calcium signaling in fine astrocytic processes: Effect of spatial properties on spontaneous activity. PLoS Comput Biol 15:e1006795 [Journal] [PubMed]
   Simulation of calcium signaling in fine astrocytic processes (Denizot et al 2019) [Model]
Dupont G, Lokenye EF, Challiss RA (2011) A model for Ca2+ oscillations stimulated by the type 5 metabotropic glutamate receptor: an unusual mechanism based on repetitive, reversible phosphorylation of the receptor. Biochimie 93:2132-8 [Journal] [PubMed]
   Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011) [Model]
Handy G, Taheri M, White JA, Borisyuk A (2017) Mathematical investigation of IP3-dependent calcium dynamics in astrocytes. J Comput Neurosci 42:257-273 [Journal] [PubMed]
   A mathematical model of evoked calcium dynamics in astrocytes (Handy et al 2017) [Model]
(110 refs)