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 • | Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017) |
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Abe T, Sugihara H, Nawa H, Shigemoto R, Mizuno N, Nakanishi S (1992) Molecular characterization of a novel metabotropic glutamate receptor mGluR5 coupled to inositol phosphate/Ca2+ signal transduction. J Biol Chem 267:13361-8 [PubMed] Agulhon C, Petravicz J, McMullen AB, Sweger EJ, Minton SK, Taves SR, Casper KB, Fiacco TA, McCarthy KD (2008) What is the role of astrocyte calcium in neurophysiology? Neuron 59:932-46 [Journal] [PubMed] Allen V, Swigart P, Cheung R, Cockcroft S, Katan M (1997) Regulation of inositol lipid-specific phospholipase cdelta by changes in Ca2+ ion concentrations. Biochem J 327 ( Pt 2):545-52 [PubMed] Araque A, Parpura V, Sanzgiri RP, Haydon PG (1998) Glutamate-dependent astrocyte modulation of synaptic transmission between cultured hippocampal neurons. Eur J Neurosci 10:2129-42 [PubMed] Balázsi G, Cornell-Bell AH, Moss F (2003) Increased phase synchronization of spontaneous calcium oscillations in epileptic human versus normal rat astrocyte cultures. Chaos 13:515-8 [Journal] [PubMed] Bernardinelli Y, Magistretti PJ, Chatton JY (2004) Astrocytes generate Na+-mediated metabolic waves. Proc Natl Acad Sci U S A 101:14937-42 [Journal] [PubMed] Berridge MJ (1990) Calcium oscillations. J Biol Chem 265:9583-6 Berridge MJ (1993) Inositol trisphosphate and calcium signalling. Nature 361:315-25 [Journal] [PubMed] Berridge MJ, Bootman MD, Lipp P (1998) Calcium--a life and death signal. Nature 395:645-8 [Journal] [PubMed] Berridge MJ, Lipp P, Bootman MD (2000) The versatility and universality of calcium signalling. Nat Rev Mol Cell Biol 1:11-21 [Journal] [PubMed] Bezprozvanny I, Watras J, Ehrlich BE (1991) Bell-shaped calcium-response curves of Ins(1,4,5)P3- and calcium-gated channels from endoplasmic reticulum of cerebellum. Nature 351:751-4 [Journal] [PubMed] Carafoli E (2002) Calcium signaling: a tale for all seasons. Proc Natl Acad Sci U S A 99:1115-22 [Journal] [PubMed] Carmignoto G (2000) Reciprocal communication systems between astrocytes and neurones. Prog Neurobiol 62:561-81 [PubMed] Charles A (1998) Intercellular calcium waves in glia. Glia 24:39-49 [PubMed] Chay T,Fan YS,Lee SY (1995) Bursting, spiking, chaos, fractals and universality in biological rhythms Int. J. Bifurcat. Chaos 5:595-635 [Journal] Chay TR, Lee YS, Fan YS (1995) Appearance of phase-locked Wenckebach-like rhythms, devil's staircase and universality in intracellular calcium spikes in non-excitable cell models. J Theor Biol 174:21-44 [Journal] [PubMed] Codazzi F, Teruel MN, Meyer T (2001) Control of astrocyte Ca(2+) oscillations and waves by oscillating translocation and activation of protein kinase C. Curr Biol 11:1089-97 [PubMed] Communi D, Dewaste V, Erneux C (1999) Calcium-calmodulin-dependent protein kinase II and protein kinase C-mediated phosphorylation and activation of D-myo-inositol 1,4, 5-trisphosphate 3-kinase B in astrocytes. J Biol Chem 274:14734-42 [PubMed] Communi D, Gevaert K, Demol H, Vandekerckhove J, Erneux C (2001) A novel receptor-mediated regulation mechanism of type I inositol polyphosphate 5-phosphatase by calcium/calmodulin-dependent protein kinase II phosphorylation. J Biol Chem 276:38738-47 [Journal] [PubMed] Communi D, Vanweyenberg V, Erneux C (1995) Molecular study and regulation of D-myo-inositol 1,4,5-trisphosphate 3-kinase. Cell Signal 7:643-50 [PubMed] Communi D, Vanweyenberg V, Erneux C (1997) D-myo-inositol 1,4,5-trisphosphate 3-kinase A is activated by receptor activation through a calcium:calmodulin-dependent protein kinase II phosphorylation mechanism. EMBO J 16:1943-52 [Journal] [PubMed] Cornell-Bell AH, Finkbeiner SM, Cooper MS, Smith SJ (1990) Glutamate induces calcium waves in cultured astrocytes: long-range glial signaling. Science 247:470-3 [PubMed] Cuthbertson KS, Chay TR (1991) Modelling receptor-controlled intracellular calcium oscillators. Cell Calcium 12:97-109 [PubMed] Dani JW, Chernjavsky A, Smith SJ (1992) Neuronal activity triggers calcium waves in hippocampal astrocyte networks. Neuron 8:429-40 [PubMed] De Koninck P, Schulman H (1998) Sensitivity of CaM kinase II to the frequency of Ca2+ oscillations. Science 279:227-30 [PubMed] De Pittà M, Volman V, Levine H, Ben-Jacob E (2009) Multimodal encoding in a simplified model of intracellular calcium signaling. Cogn Process 10 Suppl 1:S55-70 [Journal] [PubMed] De Pittà M, Volman V, Levine H, Pioggia G, De Rossi D, Ben-Jacob E (2008) Coexistence of amplitude and frequency modulations in intracellular calcium dynamics. Phys Rev E Stat Nonlin Soft Matter Phys 77:030903 [Journal] [PubMed] De Young GW, Keizer J (1992) A single-pool inositol 1,4,5-trisphosphate-receptor-based model for agonist-stimulated oscillations in Ca2+ concentration. Proc Natl Acad Sci U S A 89:9895-9 [PubMed] Delvaux A, Lemos M, Moreau C, Erneux C (1990) Regeneration of enzymatic activity after sodium dodecyl sulfate/polyacrylamide gel electrophoresis and zinc acetate staining: the example of inositol 1,4,5-trisphosphate 5-phosphatase. Anal Biochem 188:219-21 [PubMed] Dupont G, Erneux C (1997) Simulations of the effects of inositol 1,4,5-trisphosphate 3-kinase and 5-phosphatase activities on Ca2+ oscillations. Cell Calcium 22:321-31 [PubMed] Dupont G, Goldbeter A (1993) One-pool model for Ca2+ oscillations involving Ca2+ and inositol 1,4,5-trisphosphate as co-agonists for Ca2+ release. Cell Calcium 14:311-22 [PubMed] Essen LO, Perisic O, Cheung R, Katan M, Williams RL (1996) Crystal structure of a mammalian phosphoinositide-specific phospholipase C delta. Nature 380:595-602 [Journal] [PubMed] Essen LO, Perisic O, Lynch DE, Katan M, Williams RL (1997) A ternary metal binding site in the C2 domain of phosphoinositide-specific phospholipase C-delta1. Biochemistry 36:2753-62 [Journal] [PubMed] Evanko DS,Sul JY,Zhang Q,Haydon PG (2004) The regulated release of transmitters from astrocytes Glial–neuronal Signaling, Hatton GI:Parpura V, ed. pp.397 Falcke M (2003) On the role of stochastic channel behavior in intracellular Ca2+ dynamics. Biophys J 84:42-56 [Journal] [PubMed] Falcke M (2004) Reading the patterns in living cells-the physics of Ca2+ signaling Advances In Physics 53:255-440 Fellin T, Carmignoto G (2004) Neurone-to-astrocyte signalling in the brain represents a distinct multifunctional unit. J Physiol 559:3-15 [Journal] [PubMed] Fellin T, Pascual O, Gobbo S, Pozzan T, Haydon PG, Carmignoto G (2004) Neuronal synchrony mediated by astrocytic glutamate through activation of extrasynaptic NMDA receptors. Neuron 43:729-43 [Journal] [PubMed] Fisher SK (1995) Homologous and heterologous regulation of receptor-stimulated phosphoinositide hydrolysis. Eur J Pharmacol 288:231-50 [PubMed] Foskett JK, Roifman CM, Wong D (1991) Activation of calcium oscillations by thapsigargin in parotid acinar cells. J Biol Chem 266:2778-82 [PubMed] Gallo V, Ghiani CA (2000) Glutamate receptors in glia: new cells, new inputs and new functions. Trends Pharmacol Sci 21:252-8 [PubMed] Hanson PI, Meyer T, Stryer L, Schulman H (1994) Dual role of calmodulin in autophosphorylation of multifunctional CaM kinase may underlie decoding of calcium signals. Neuron 12:943-56 [PubMed] Hirose K, Kadowaki S, Tanabe M, Takeshima H, Iino M (1999) Spatiotemporal dynamics of inositol 1,4,5-trisphosphate that underlies complex Ca2+ mobilization patterns. Science 284:1527-30 [PubMed] Höfer T, Venance L, Giaume C (2002) Control and plasticity of intercellular calcium waves in astrocytes: a modeling approach. J Neurosci 22:4850-9 [PubMed] Iino M (1990) Biphasic Ca2+ dependence of inositol 1,4,5-trisphosphate-induced Ca release in smooth muscle cells of the guinea pig taenia caeci. J Gen Physiol 95:1103-22 [PubMed] Irvine RF, Letcher AJ, Heslop JP, Berridge MJ (1986) The inositol tris/tetrakisphosphate pathway--demonstration of Ins(1,4,5)P3 3-kinase activity in animal tissues. Nature 320:631-4 [Journal] [PubMed] Jaffe LF (1993) Classes and mechanisms of calcium waves. Cell Calcium 14:736-45 [PubMed] Kawabata S, Tsutsumi R, Kohara A, Yamaguchi T, Nakanishi S, Okada M (1996) Control of calcium oscillations by phosphorylation of metabotropic glutamate receptors. Nature 383:89-92 [Journal] [PubMed] Kazantsev VB (2009) Spontaneous calcium signals induced by gap junctions in a network model of astrocytes. Phys Rev E Stat Nonlin Soft Matter Phys 79:010901 [Journal] [PubMed] Keizer J, Li YX, Stojilkovic S, Rinzel J (1995) InsP3-induced Ca2+ excitability of the endoplasmic reticulum. Mol Biol Cell 6:945-51 [PubMed] Kolodziej SJ, Hudmon A, Waxham MN, Stoops JK (2000) Three-dimensional reconstructions of calcium/calmodulin-dependent (CaM) kinase IIalpha and truncated CaM kinase IIalpha reveal a unique organization for its structural core and functional domains. J Biol Chem 275:14354-9 [PubMed] Li YX, Rinzel J (1994) Equations for InsP3 receptor-mediated [Ca2+]i oscillations derived from a detailed kinetic model: a Hodgkin-Huxley like formalism. J Theor Biol 166:461-73 [Journal] [PubMed] Li YX, Rinzel J, Keizer J, Stojilkovic SS (1994) Calcium oscillations in pituitary gonadotrophs: comparison of experiment and theory. Proc Natl Acad Sci U S A 91:58-62 [PubMed] Lytton J, Westlin M, Burk SE, Shull GE, MacLennan DH (1992) Functional comparisons between isoforms of the sarcoplasmic or endoplasmic reticulum family of calcium pumps. J Biol Chem 267:14483-9 [PubMed] Masu M, Tanabe Y, Tsuchida K, Shigemoto R, Nakanishi S (1991) Sequence and expression of a metabotropic glutamate receptor. Nature 349:760-5 [Journal] [PubMed] Meyer T, Stryer L (1988) Molecular model for receptor-stimulated calcium spiking. Proc Natl Acad Sci U S A 85:5051-5 [PubMed] Mishra J, Bhalla US (2002) Simulations of inositol phosphate metabolism and its interaction with InsP(3)-mediated calcium release. Biophys J 83:1298-316 [Journal] [PubMed] Montana V, Malarkey EB, Verderio C, Matteoli M, Parpura V (2006) Vesicular transmitter release from astrocytes. Glia 54:700-15 [Journal] [PubMed] Nash MS, Young KW, Challiss RA, Nahorski SR (2001) Intracellular signalling. Receptor-specific messenger oscillations. Nature 413:381-2 [Journal] [PubMed] Nett WJ, Oloff SH, McCarthy KD (2002) Hippocampal astrocytes in situ exhibit calcium oscillations that occur independent of neuronal activity. J Neurophysiol 87:528-37 [Journal] [PubMed] Nishizuka Y (1995) Protein kinase C and lipid signaling for sustained cellular responses. FASEB J 9:484-96 [PubMed] Parpura V (2004) Glutamate-mediated bi-directional signaling between neurons and astrocytes Glial–neuronal Signaling, Hatton GI:Parpura V, ed. pp.365 Parpura V, Basarsky TA, Liu F, Jeftinija K, Jeftinija S, Haydon PG (1994) Glutamate-mediated astrocyte-neuron signalling. Nature 369:744-7 [Journal] [PubMed] Pasti L, Volterra A, Pozzan T, Carmignoto G (1997) Intracellular calcium oscillations in astrocytes: a highly plastic, bidirectional form of communication between neurons and astrocytes in situ. J Neurosci 17:7817-30 [PubMed] Pawelczyk T, Matecki A (1997) Structural requirements of phospholipase C delta1 for regulation by spermine, sphingosine and sphingomyelin. Eur J Biochem 248:459-65 [PubMed] Perea G, Araque A (2005) Synaptic regulation of the astrocyte calcium signal. J Neural Transm (Vienna) 112:127-35 [Journal] [PubMed] Perea G, Araque A (2005) Properties of synaptically evoked astrocyte calcium signal reveal synaptic information processing by astrocytes. J Neurosci 25:2192-203 [Journal] [PubMed] Politi A, Gaspers LD, Thomas AP, Höfer T (2006) Models of IP3 and Ca2+ oscillations: frequency encoding and identification of underlying feedbacks. Biophys J 90:3120-33 [Journal] [PubMed] Porter JT, McCarthy KD (1996) Hippocampal astrocytes in situ respond to glutamate released from synaptic terminals. J Neurosci 16:5073-81 [PubMed] Rebecchi MJ, Pentyala SN (2000) Structure, function, and control of phosphoinositide-specific phospholipase C. Physiol Rev 80:1291-335 [Journal] [PubMed] Rhee SG (2001) Regulation of phosphoinositide-specific phospholipase C. Annu Rev Biochem 70:281-312 [Journal] [PubMed] Rhee SG, Bae YS (1997) Regulation of phosphoinositide-specific phospholipase C isozymes. J Biol Chem 272:15045-8 [PubMed] Rooney TA, Renard DC, Sass EJ, Thomas AP (1991) Oscillatory cytosolic calcium waves independent of stimulated inositol 1,4,5-trisphosphate formation in hepatocytes. J Biol Chem 266:12272-82 [PubMed] Ryu SH, Kim UH, Wahl MI, Brown AB, Carpenter G, Huang KP, Rhee SG (1990) Feedback regulation of phospholipase C-beta by protein kinase C. J Biol Chem 265:17941-5 [PubMed] Seifert G, Hüttmann K, Schramm J, Steinhäuser C (2004) Enhanced relative expression of glutamate receptor 1 flip AMPA receptor subunits in hippocampal astrocytes of epilepsy patients with Ammon's horn sclerosis. J Neurosci 24:1996-2003 [Journal] [PubMed] Sejnowski TJ, Paulsen O (2006) Network oscillations: emerging computational principles. J Neurosci 26:1673-6 [Journal] [PubMed] Shinomura T, Asaoka Y, Oka M, Yoshida K, Nishizuka Y (1991) Synergistic action of diacylglycerol and unsaturated fatty acid for protein kinase C activation: its possible implications. Proc Natl Acad Sci U S A 88:5149-53 [PubMed] Shrier A, Dubarsky H, Rosengarten M, Guevara MR, Nattel S, Glass L (1987) Prediction of complex atrioventricular conduction rhythms in humans with use of the atrioventricular nodal recovery curve. Circulation 76:1196-205 [PubMed] Sim SS, Kim JW, Rhee SG (1990) Regulation of D-myo-inositol 1,4,5-trisphosphate 3-kinase by cAMP-dependent protein kinase and protein kinase C. J Biol Chem 265:10367-72 [PubMed] Sims CE, Allbritton NL (1998) Metabolism of inositol 1,4,5-trisphosphate and inositol 1,3,4,5-tetrakisphosphate by the oocytes of Xenopus laevis. J Biol Chem 273:4052-8 [PubMed] Skupin A, Falcke M (2007) Statistical properties and information content of calcium oscillations. Genome Inform 18:44-53 [PubMed] Skupin A, Kettenmann H, Winkler U, Wartenberg M, Sauer H, Tovey SC, Taylor CW, Falcke M (2008) How does intracellular Ca2+ oscillate: by chance or by the clock? Biophys J 94:2404-11 [Journal] [PubMed] Sneyd J, Wetton BT, Charles AC, Sanderson MJ (1995) Intercellular calcium waves mediated by diffusion of inositol trisphosphate: a two-dimensional model. Am J Physiol 268:C1537-45 [Journal] [PubMed] Stout CE, Costantin JL, Naus CC, Charles AC (2002) Intercellular calcium signaling in astrocytes via ATP release through connexin hemichannels. J Biol Chem 277:10482-8 [Journal] [PubMed] Stryer L (1999) Biochemistry Suzuki Y, Moriyoshi E, Tsuchiya D, Jingami H (2004) Negative cooperativity of glutamate binding in the dimeric metabotropic glutamate receptor subtype 1. J Biol Chem 279:35526-34 [Journal] [PubMed] Tang Y, Othmer HG (1995) Frequency encoding in excitable systems with applications to calcium oscillations. Proc Natl Acad Sci U S A 92:7869-73 [PubMed] Teichberg VI (1991) Glial glutamate receptors: likely actors in brain signaling. FASEB J 5:3086-91 [PubMed] Thiel G, Czernik AJ, Gorelick F, Nairn AC, Greengard P (1988) Ca2+/calmodulin-dependent protein kinase II: identification of threonine-286 as the autophosphorylation site in the alpha subunit associated with the generation of Ca2+-independent activity. Proc Natl Acad Sci U S A 85:6337-41 [PubMed] Togashi S, Takazawa K, Endo T, Erneux C, Onaya T (1997) Structural identification of the myo-inositol 1,4,5-trisphosphate-binding domain in rat brain inositol 1,4,5-trisphosphate 3-kinase. Biochem J 326 ( Pt 1):221-5 [PubMed] Tsodyks MV, Markram H (1997) The neural code between neocortical pyramidal neurons depends on neurotransmitter release probability. Proc Natl Acad Sci U S A 94:719-23 [PubMed] Uhlhaas PJ, Singer W (2006) Neural synchrony in brain disorders: relevance for cognitive dysfunctions and pathophysiology. Neuron 52:155-68 [Journal] [PubMed] Verjans B, Lecocq R, Moreau C, Erneux C (1992) Purification of bovine brain inositol-1,4,5-trisphosphate 5-phosphatase. Eur J Biochem 204:1083-7 [PubMed] Verkhratsky A, Kettenmann H (1996) Calcium signalling in glial cells. Trends Neurosci 19:346-52 [PubMed] Volman V, Ben-Jacob E, Levine H (2007) The astrocyte as a gatekeeper of synaptic information transfer. Neural Comput 19:303-26 [Journal] [PubMed] Volterra A, Meldolesi J (2005) Astrocytes, from brain glue to communication elements: the revolution continues. Nat Rev Neurosci 6:626-40 [Journal] [PubMed] Wang X, Lou N, Xu Q, Tian GF, Peng WG, Han X, Kang J, Takano T, Nedergaard M (2006) Astrocytic Ca2+ signaling evoked by sensory stimulation in vivo. Nat Neurosci 9:816-23 [Journal] [PubMed] Woods NM, Cuthbertson KS, Cobbold PH (1986) Repetitive transient rises in cytoplasmic free calcium in hormone-stimulated hepatocytes. Nature 319:600-2 [Journal] [PubMed] Young KW, Nash MS, Challiss RA, Nahorski SR (2003) Role of Ca2+ feedback on single cell inositol 1,4,5-trisphosphate oscillations mediated by G-protein-coupled receptors. J Biol Chem 278:20753-60 [Journal] [PubMed] Zhang BX, Zhao H, Muallem S (1993) Ca(2+)-dependent kinase and phosphatase control inositol 1,4,5-trisphosphate-mediated Ca2+ release. Modification by agonist stimulation. J Biol Chem 268:10997-1001 [PubMed] Zonta M, Carmignoto G (2002) Calcium oscillations encoding neuron-to-astrocyte communication. J Physiol Paris 96:193-8 [PubMed] Zur Nieden R, Deitmer JW (2006) The role of metabotropic glutamate receptors for the generation of calcium oscillations in rat hippocampal astrocytes in situ. Cereb Cortex 16:676-87 [Journal] [PubMed] | Cui Y, Prokin I, Xu H, Delord B, Genet S, Venance L, Berry H (2016) Endocannabinoid dynamics gate spike-timing dependent depression and potentiation. Elife 5:e13185 [Journal] [PubMed]
Denizot A, Arizono M, Nägerl UV, Soula H, Berry H (2019) Simulation of calcium signaling in fine astrocytic processes: Effect of spatial properties on spontaneous activity. PLoS Comput Biol 15:e1006795 [Journal] [PubMed]
Dupont G, Lokenye EF, Challiss RA (2011) A model for Ca2+ oscillations stimulated by the type 5 metabotropic glutamate receptor: an unusual mechanism based on repetitive, reversible phosphorylation of the receptor. Biochimie 93:2132-8 [Journal] [PubMed]
Handy G, Taheri M, White JA, Borisyuk A (2017) Mathematical investigation of IP3-dependent calcium dynamics in astrocytes. J Comput Neurosci 42:257-273 [Journal] [PubMed]
Manninen T, Havela R, Linne ML (2017) Reproducibility and comparability of computational models for astrocyte calcium excitability Front. Neuroinform. [Journal] Savtchenko LP, Bard L, Jensen TP, Reynolds JP, Kraev I, Medvedev N, Stewart MG, Henneberger C, Rusakov DA (2018) Disentangling astroglial physiology with a realistic cell model in silico. Nat Commun 9:3554 [Journal] [PubMed]
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