Citation Relationships

Legends: Link to a Model Reference cited by multiple papers

Otopalik AG, Goeritz ML, Sutton AC, Brookings T, Guerini C, Marder E (2017) Sloppy morphological tuning in identified neurons of the crustacean stomatogastric ganglion. Elife [PubMed]

   Sloppy morphological tuning in identified neurons of the crustacean STG (Otopalik et al 2017)

References and models cited by this paper

References and models that cite this paper

Anderson WW, Barker DL (1981) Synaptic mechanisms that generate network oscillations in the absence of discrete postsynaptic potentials. J Exp Zool 216:187-91 [Journal] [PubMed]
Baldwin DH, Graubard K (1995) Distribution of fine neurites of stomatogastric neurons of the crab Cancer borealis: evidence for a structured neuropil. J Comp Neurol 356:355-67 [Journal] [PubMed]
Bielza C, Benavides-Piccione R, López-Cruz P, Larrañaga P, DeFelipe J (2014) Branching angles of pyramidal cell dendrites follow common geometrical design principles in different cortical areas. Sci Rep 4:5909 [Journal] [PubMed]
Blitz DM, Nusbaum MP (2011) Neural circuit flexibility in a small sensorimotor system. Curr Opin Neurobiol 21:544-52 [Journal] [PubMed]
Bloomfield SA, Miller RF (1986) A functional organization of ON and OFF pathways in the rabbit retina. J Neurosci 6:1-13 [PubMed]
Bose A, Golowasch J, Guan Y, Nadim F (2014) The role of linear and voltage-dependent ionic currents in the generation of slow wave oscillations. J Comput Neurosci 37:229-42 [Journal] [PubMed]
Bucher D, Johnson CD, Marder E (2007) Neuronal morphology and neuropil structure in the stomatogastric ganglion of the lobster, Homarus americanus. J Comp Neurol 501:185-205 [Journal] [PubMed]
Calabrese RL, Norris BJ, Wenning A, Wright TM (2011) Coping with variability in small neuronal networks. Integr Comp Biol 51:845-55 [Journal] [PubMed]
Chen BL, Hall DH, Chklovskii DB (2006) Wiring optimization can relate neuronal structure and function. Proc Natl Acad Sci U S A 103:4723-8 [Journal] [PubMed]
Cherniak C (1992) Local optimization of neuron arbors. Biol Cybern 66:503-10 [PubMed]
Chklovskii DB (2000) Optimal sizes of dendritic and axonal arbors in a topographic projection. J Neurophysiol 83:2113-9 [Journal] [PubMed]
Chklovskii DB (2004) Synaptic connectivity and neuronal morphology: two sides of the same coin. Neuron 43:609-17 [Journal] [PubMed]
Chklovskii DB, Schikorski T, Stevens CF (2002) Wiring optimization in cortical circuits. Neuron 34:341-7 [PubMed]
Chklovskii DB, Stepanyants A (2003) Power-law for axon diameters at branch point. BMC Neurosci 4:18 [Journal] [PubMed]
Christie AE, Baldwin D, Turrigiano G, Graubard K, Marder E (1995) Immunocytochemical localization of multiple cholecystokinin-like peptides in the stomatogastric nervous system of the crab Cancer borealis. J Exp Biol 198:263-71 [PubMed]
Christie AE, Baldwin DH, Marder E, Graubard K (1997) Organization of the stomatogastric neuropil of the crab, Cancer borealis, as revealed by modulator immunocytochemistry. Cell Tissue Res 288:135-48 [PubMed]
Christie AE, Skiebe P, Marder E (1995) Matrix of neuromodulators in neurosecretory structures of the crab Cancer borealis. J Exp Biol 198:2431-9 [PubMed]
Cuntz H, Borst A, Segev I (2007) Optimization principles of dendritic structure. Theor Biol Med Model 4:21 [Journal] [PubMed]
Cuntz H, Forstner F, Borst A, Häusser M (2010) One rule to grow them all: a general theory of neuronal branching and its practical application. PLoS Comput Biol [Journal] [PubMed]
Cuntz H, Forstner F, Haag J, Borst A (2008) The morphological identity of insect dendrites. PLoS Comput Biol 4:e1000251 [Journal] [PubMed]
Cuntz H, Forstner F, Schnell B, Ammer G, Raghu SV, Borst A (2013) Preserving neural function under extreme scaling. PLoS One 8:e71540 [Journal] [PubMed]
Cuntz H, Mathy A, Häusser M (2012) A scaling law derived from optimal dendritic wiring. Proc Natl Acad Sci U S A 109:11014-8 [Journal] [PubMed]
de Sousa G, Maex R, Adams R, Davey N, Steuber V (2015) Dendritic morphology predicts pattern recognition performance in multi-compartmental model neurons with and without active conductances. J Comput Neurosci 38:221-34 [Journal] [PubMed]
Donohue DE, Ascoli GA (2011) Automated reconstruction of neuronal morphology: an overview. Brain Res Rev 67:94-102 [Journal] [PubMed]
Eisen JS, Marder E (1982) Mechanisms underlying pattern generation in lobster stomatogastric ganglion as determined by selective inactivation of identified neurons. III. Synaptic connections of electrically coupled pyloric neurons. J Neurophysiol 48:1392-1415 [Journal] [PubMed]
Engelhardt JK, Morales FR, Chase MH (1998) An alternative method for the analysis of neuron passive electrical data which uses integrals of voltage transients. J Neurosci Methods 81:131-8 [PubMed]
Geuna S (2000) Appreciating the difference between design-based and model-based sampling strategies in quantitative morphology of the nervous system. J Comp Neurol 427:333-9 [PubMed]
Goaillard JM, Taylor AL, Schulz DJ, Marder E (2009) Functional consequences of animal-to-animal variation in circuit parameters. Nat Neurosci 12:1424-30 [Journal] [PubMed]
Goeritz ML, Bowers MR, Slepian B, Marder E (2013) Neuropilar projections of the anterior gastric receptor neuron in the stomatogastric ganglion of the Jonah crab, Cancer borealis. PLoS One 8:e79306 [Journal] [PubMed]
Goldberg D, Nusbaum MP, Marder E (1988) Substance P-like immunoreactivity in the stomatogastric nervous systems of the crab Cancer borealis and the lobsters Panulirus interruptus and Homarus americanus. Cell Tissue Res 252:515-22 [PubMed]
Goodman C (1976) Constancy and uniqueness in a large population of small interneurons. Science 193:502-4 [PubMed]
Goodman CS (1978) Isogenic grasshoppers: genetic variability in the morphology of identified neurons. J Comp Neurol 182:681-705 [Journal] [PubMed]
Graubard K (1978) Synaptic transmission without action potentials: input-output properties of a nonspiking presynaptic neuron. J Neurophysiol 41:1014-25 [Journal] [PubMed]
Graubard K, Raper JA, Hartline DK (1980) Graded synaptic transmission between spiking neurons. Proc Natl Acad Sci U S A 77:3733-5 [PubMed]
Graubard K, Raper JA, Hartline DK (1983) Graded synaptic transmission between identified spiking neurons. J Neurophysiol 50:508-21 [Journal] [PubMed]
Graubard K, Ross WN (1985) Regional distribution of calcium influx into bursting neurons detected with arsenazo III. Proc Natl Acad Sci U S A 82:5565-9 [PubMed]
Gutierrez GJ, O'Leary T, Marder E (2013) Multiple mechanisms switch an electrically coupled, synaptically inhibited neuron between competing rhythmic oscillators. Neuron 77:845-58 [Journal] [PubMed]
   Competing oscillator 5-cell circuit and Parameterscape plotting (Gutierrez et al. 2013) [Model]
Hamada MS, Goethals S, de Vries SI, Brette R, Kole MH (2016) Covariation of axon initial segment location and dendritic tree normalizes the somatic action potential. Proc Natl Acad Sci U S A 113:14841-14846 [Journal] [PubMed]
Harris-Warrick R, Marder E, Selverston AI, Moulins M (1992) Dynamic Biological Networks: The Stomatogastric Nervous System
Hines ML, Morse TM, Carnevale NT (2007) Model structure analysis in NEURON : toward interoperability among neural simulators. Methods Mol Biol 401:91-102 [Journal] [PubMed]
Hong YK, Kim IJ, Sanes JR (2011) Stereotyped axonal arbors of retinal ganglion cell subsets in the mouse superior colliculus. J Comp Neurol 519:1691-711 [Journal] [PubMed]
Hunter JD (2007) Matplotlib: a 2D graphics environment Ieee Comput Sci Eng 9:90-95
Kilman VL, Marder E (1996) Ultrastructure of the stomatogastric ganglion neuropil of the crab, Cancer borealis. J Comp Neurol 374:362-75 [Journal] [PubMed]
Kim Y, Sinclair R, Chindapol N, Kaandorp JA, De Schutter E (2012) Geometric theory predicts bifurcations in minimal wiring cost trees in biology are flat. PLoS Comput Biol 8:e1002474 [Journal] [PubMed]
King DG (1976) Organization of crustacean neuropil. II. Distribution of synaptic contacts on identified motor neurons in lobster stomatogastric ganglion. J Neurocytol 5:239-66 [PubMed]
King DG (1976) Organization of crustacean neuropil. I. Patterns of synaptic connections in lobster stomatogastric ganglion. J Neurocytol 5:207-37 [PubMed]
Lu J, Tapia JC, White OL, Lichtman JW (2009) The interscutularis muscle connectome. PLoS Biol 7:e32 [Journal] [PubMed]
Mainen ZF, Sejnowski TJ (1996) Influence of dendritic structure on firing pattern in model neocortical neurons. Nature 382:363-6 [Journal] [PubMed]
   Influence of dendritic structure on neocortical neuron firing patterns (Mainen and Sejnowski 1996) [Model]
Manor Y, Nadim F, Abbott LF, Marder E (1997) Temporal dynamics of graded synaptic transmission in the lobster stomatogastric ganglion. J Neurosci 17:5610-21 [PubMed]
Manor Y, Nadim F, Epstein S, Ritt J, Marder E, Kopell N (1999) Network oscillations generated by balancing graded asymmetric reciprocal inhibition in passive neurons. J Neurosci 19:2765-79 [PubMed]
Marder E, Bucher D (2007) Understanding circuit dynamics using the stomatogastric nervous system of lobsters and crabs. Annu Rev Physiol 69:291-316 [Journal] [PubMed]
Marder E, Eisen JS (1984) Transmitter identification of pyloric neurons: electrically coupled neurons use different transmitters. J Neurophysiol 51:1345-61 [Journal] [PubMed]
Marder E, Goaillard JM (2006) Variability, compensation and homeostasis in neuron and network function. Nat Rev Neurosci 7:563-74 [Journal] [PubMed]
Marder E, Goeritz ML, Otopalik AG (2015) Robust circuit rhythms in small circuits arise from variable circuit components and mechanisms. Curr Opin Neurobiol 31:156-63 [Journal] [PubMed]
Marder E, Hooper SL, Siwicki KK (1986) Modulatory action and distribution of the neuropeptide proctolin in the crustacean stomatogastric nervous system. J Comp Neurol 243:454-67 [Journal] [PubMed]
Martin KA, Somogyi P, Whitteridge D (1983) Physiological and morphological properties of identified basket cells in the cat's visual cortex. Exp Brain Res 50:193-200 [PubMed]
Martin KA, Whitteridge D (1984) The relationship of receptive field properties to the dendritic shape of neurones in the cat striate cortex. J Physiol 356:291-302 [PubMed]
Martin KA, Whitteridge D (1984) Form, function and intracortical projections of spiny neurones in the striate visual cortex of the cat. J Physiol 353:463-504 [PubMed]
Maynard DM, Dando MR (1974) The structure of the stomatogastric neuromuscular system in Callinectes sapidus, Homarus americanus and Panulirus argus (Decapoda Crustacea). Philos Trans R Soc Lond B Biol Sci 268:161-220 [Journal] [PubMed]
Maynard DM,Walton KD (1975) Effects of Maintained Depolarization of Presynaptic Neurons on Inhibitory Transmission in Lobster Neuropil J. Comp. Physiol. 97:215-243
Maynard EA (1971) Electron microscopy of stomatogastric ganglion in the lobster Homarus americanus. Tissue Cell 3:137-60 [PubMed]
Miller JP, Jacobs GA (1984) Relationships between neuronal structure and function. J Exp Biol 112:129-45 [PubMed]
Norris BJ, Wenning A, Wright TM, Calabrese RL (2011) Constancy and variability in the output of a central pattern generator. J Neurosci 31:4663-74 [Journal] [PubMed]
Otopalik AG,Sutton AL,Banghart M,Marder E (2017) When complex neuronal structures may not matter (in review)
Pérez F,Granger BE (2007) IPython: A System for Interactive Scientific Computing Computing in Science & Engineering 9:21-29
RALL W (1959) Branching dendritic trees and motoneuron membrane resistivity. Exp Neurol 1:491-527 [PubMed]
Rall W, Rinzel J (1973) Branch input resistance and steady attenuation for input to one branch of a dendritic neuron model. Biophys J 13:648-87 [Journal] [PubMed]
Ramon y Cajal S (1995) Histology of the Nervous System of Man and Vertebrates :1-1672
Raper JA (1979) Nonimpulse-mediated synaptic transmission during the generation of a cyclic motor program. Science 205:304-6 [PubMed]
Rinzel J, Rall W (1974) Transient response in a dendritic neuron model for current injected at one branch. Biophys J 14:759-90 [Journal] [PubMed]
Rivera-Alba M, Peng H, de Polavieja GG, Chklovskii DB (2014) Wiring economy can account for cell body placement across species and brain areas. Curr Biol 24:R109-10 [Journal] [PubMed]
Roffman RC, Norris BJ, Calabrese RL (2012) Animal-to-animal variability of connection strength in the leech heartbeat central pattern generator. J Neurophysiol 107:1681-93 [Journal] [PubMed]
Ross WN, Graubard K (1989) Spatially and temporally resolved calcium concentration changes in oscillating neurons of crab stomatogastric ganglion. Proc Natl Acad Sci U S A 86:1679-83 [PubMed]
Sakurai A,Tamvacakis AN,Katz PS (2014) Hidden synaptic differences in a neural circuit underlie differential behavioral susceptibility to a neural injury Elife [Journal]
Schulz DJ, Goaillard JM, Marder E (2006) Variable channel expression in identified single and electrically coupled neurons in different animals. Nat Neurosci 9:356-62 [Journal] [PubMed]
Selverston AI, Russell DF, Miller JP (1976) The stomatogastric nervous system: structure and function of a small neural network. Prog Neurobiol 7:215-90 [PubMed]
Stepanyants A, Tamás G, Chklovskii DB (2004) Class-specific features of neuronal wiring. Neuron 43:251-9 [Journal] [PubMed]
Thuma JB, White WE, Hobbs KH, Hooper SL (2009) Pyloric neuron morphology in the stomatogastric ganglion of the lobster, Panulirus interruptus. Brain Behav Evol 73:26-42 [Journal] [PubMed]
Van der Walt S,Colbert SC,Varoquaux G (2011) The NumPy Array: A Structure for Efficient Numerical Computation Computing in Science & Engineering 13:22-30
van Pelt J, Uylings HB (2011) The Flatness of Bifurcations in 3D Dendritic Trees: An Optimal Design. Front Comput Neurosci 5:54 [Journal] [PubMed]
Van Pelt J, Uylings HB, Verwer RW, Pentney RJ, Woldenberg MJ (1992) Tree asymmetry--a sensitive and practical measure for binary topological trees. Bull Math Biol 54:759-84 [PubMed]
Wang Y, Gupta A, Toledo-Rodriguez M, Wu CZ, Markram H (2002) Anatomical, physiological, molecular and circuit properties of nest basket cells in the developing somatosensory cortex. Cereb Cortex 12:395-410 [PubMed]
Wen Q, Chklovskii DB (2008) A cost-benefit analysis of neuronal morphology. J Neurophysiol 99:2320-8 [Journal] [PubMed]
Wen Q, Stepanyants A, Elston GN, Grosberg AY, Chklovskii DB (2009) Maximization of the connectivity repertoire as a statistical principle governing the shapes of dendritic arbors. Proc Natl Acad Sci U S A 106:12536-41 [Journal] [PubMed]
Wilensky AE, Baldwin DH, Christie AE, Graubard K (2003) Stereotyped neuropil branching of an identified stomatogastric motor neuron. J Comp Neurol 466:554-63 [Journal] [PubMed]
Moubarak E, Engel D, Dufour MA, Tapia M, Tell F, Goaillard JM (2019) Robustness to Axon Initial Segment Variation Is Explained by Somatodendritic Excitability in Rat Substantia Nigra Dopaminergic Neurons. J Neurosci 39:5044-5063 [Journal] [PubMed]
   Dopaminergic subtantia nigra neuron (Moubarak et al 2019) [Model]
(89 refs)