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Bono J, Clopath C (2017) Modeling somatic and dendritic spike mediated plasticity at the single neuron and network level. Nat Commun 8:706 [PubMed]

   Modeling dendritic spikes and plasticity (Bono and Clopath 2017)

References and models cited by this paper

References and models that cite this paper

Acker CD, Antic SD (2009) Quantitative assessment of the distributions of membrane conductances involved in action potential backpropagation along basal dendrites. J Neurophysiol 101:1524-41 [Journal] [PubMed]
   Excitability of PFC Basal Dendrites (Acker and Antic 2009) [Model]
Antic SD, Zhou WL, Moore AR, Short SM, Ikonomu KD (2010) The decade of the dendritic NMDA spike. J Neurosci Res 88:2991-3001 [Journal] [PubMed]
Artola A, Bröcher S, Singer W (1990) Different voltage-dependent thresholds for inducing long-term depression and long-term potentiation in slices of rat visual cortex. Nature 347:69-72 [Journal] [PubMed]
Behabadi BF, Polsky A, Jadi M, Schiller J, Mel BW (2012) Location-dependent excitatory synaptic interactions in pyramidal neuron dendrites. PLoS Comput Biol 8:e1002599 [Journal] [PubMed]
   Excitatory synaptic interactions in pyramidal neuron dendrites (Behabadi et al. 2012) [Model]
Benavides-Piccione R, Fernaud-Espinosa I, Robles V, Yuste R, DeFelipe J (2013) Age-based comparison of human dendritic spine structure using complete three-dimensional reconstructions. Cereb Cortex 23:1798-810 [Journal] [PubMed]
Berlucchi G, Buchtel HA (2009) Neuronal plasticity: historical roots and evolution of meaning. Exp Brain Res 192:307-19 [Journal] [PubMed]
Bi GQ, Poo MM (1998) Synaptic modifications in cultured hippocampal neurons: dependence on spike timing, synaptic strength, and postsynaptic cell type. J Neurosci 18:10464-72 [PubMed]
Bienenstock EL, Cooper LN, Munro PW (1982) Theory for the development of neuron selectivity: orientation specificity and binocular interaction in visual cortex. J Neurosci 2:32-48 [PubMed]
Bliss TV, Lomo T (1973) Long-lasting potentiation of synaptic transmission in the dentate area of the anaesthetized rabbit following stimulation of the perforant path. J Physiol 232:331-56 [PubMed]
Bloss EB, Cembrowski MS, Karsh B, Colonell J, Fetter RD, Spruston N (2016) Structured Dendritic Inhibition Supports Branch-Selective Integration in CA1 Pyramidal Cells. Neuron 89:1016-30 [Journal] [PubMed]
   CA1 pyramidal neuron synaptic integration (Bloss et al. 2016) [Model]
Branco T, Clark BA, Häusser M (2010) Dendritic discrimination of temporal input sequences in cortical neurons. Science 329:1671-5 [Journal] [PubMed]
   Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010) [Model]
Branco T, Häusser M (2011) Synaptic integration gradients in single cortical pyramidal cell dendrites. Neuron 69:885-92 [Journal] [PubMed]
   Dendritic Discrimination of Temporal Input Sequences (Branco et al. 2010) [Model]
Brandalise F, Gerber U (2014) Mossy fiber-evoked subthreshold responses induce timing-dependent plasticity at hippocampal CA3 recurrent synapses. Proc Natl Acad Sci U S A 111:4303-8 [Journal] [PubMed]
Brea J, Gaál AT, Urbanczik R, Senn W (2016) Prospective Coding by Spiking Neurons. PLoS Comput Biol 12:e1005003 [Journal] [PubMed]
Buchanan KA, Mellor JR (2010) The activity requirements for spike timing-dependent plasticity in the hippocampus. Front Synaptic Neurosci 2:11 [Journal] [PubMed]
Caporale N, Dan Y (2008) Spike timing-dependent plasticity: a Hebbian learning rule. Annu Rev Neurosci 31:25-46 [Journal] [PubMed]
Caroni P, Donato F, Muller D (2012) Structural plasticity upon learning: regulation and functions. Nat Rev Neurosci 13:478-90 [Journal] [PubMed]
Cazé RD,Humphries M,Gutkin BS (2012) Spiking and saturating dendrites differentially expand single neuron computation capacity Advances in neural information processing systems, Pereira F:Burges CJC:Bottou L:Weinberger KQ, ed. pp.1
Chen X, Leischner U, Rochefort NL, Nelken I, Konnerth A (2011) Functional mapping of single spines in cortical neurons in vivo. Nature 475:501-5 [Journal] [PubMed]
Chistiakova M, Bannon NM, Bazhenov M, Volgushev M (2014) Heterosynaptic plasticity: multiple mechanisms and multiple roles. Neuroscientist 20:483-98 [Journal] [PubMed]
Chistiakova M, Bannon NM, Chen JY, Bazhenov M, Volgushev M (2015) Homeostatic role of heterosynaptic plasticity: models and experiments. Front Comput Neurosci 9:89 [Journal] [PubMed]
Cichon J, Gan WB (2015) Branch-specific dendritic Ca(2+) spikes cause persistent synaptic plasticity. Nature 520:180-5 [Journal] [PubMed]
Clopath C, Büsing L, Vasilaki E, Gerstner W (2010) Connectivity reflects coding: a model of voltage-based STDP with homeostasis. Nat Neurosci 13:344-52 [Journal] [PubMed]
   Voltage-based STDP synapse (Clopath et al. 2010) [Model]
Druckmann S, Feng L, Lee B, Yook C, Zhao T, Magee JC, Kim J (2014) Structured synaptic connectivity between hippocampal regions. Neuron 81:629-40 [Journal] [PubMed]
Dudek SM, Bear MF (1992) Homosynaptic long-term depression in area CA1 of hippocampus and effects of N-methyl-D-aspartate receptor blockade. Proc Natl Acad Sci U S A 89:4363-7 [PubMed]
Dudman JT, Tsay D, Siegelbaum SA (2007) A role for synaptic inputs at distal dendrites: instructive signals for hippocampal long-term plasticity. Neuron 56:866-79 [Journal] [PubMed]
Feldman DE (2012) The spike-timing dependence of plasticity. Neuron 75:556-71 [Journal] [PubMed]
Frégnac Y, Pananceau M, René A, Huguet N, Marre O, Levy M, Shulz DE (2010) A Re-Examination of Hebbian-Covariance Rules and Spike Timing-Dependent Plasticity in Cat Visual Cortex in vivo. Front Synaptic Neurosci 2:147 [Journal] [PubMed]
Frey U, Morris RG (1997) Synaptic tagging and long-term potentiation. Nature 385:533-6 [Journal] [PubMed]
Froemke RC, Dan Y (2002) Spike-timing-dependent synaptic modification induced by natural spike trains. Nature 416:433-8 [Journal] [PubMed]
Froemke RC, Letzkus JJ, Kampa BM, Hang GB, Stuart GJ (2010) Dendritic synapse location and neocortical spike-timing-dependent plasticity. Front Synaptic Neurosci 2:29 [Journal] [PubMed]
Froemke RC, Tsay IA, Raad M, Long JD, Dan Y (2006) Contribution of individual spikes in burst-induced long-term synaptic modification. J Neurophysiol 95:1620-9 [Journal] [PubMed]
Fu M, Yu X, Lu J, Zuo Y (2012) Repetitive motor learning induces coordinated formation of clustered dendritic spines in vivo. Nature 483:92-5 [Journal] [PubMed]
Fusi S, Drew PJ, Abbott LF (2005) Cascade models of synaptically stored memories. Neuron 45:599-611 [Journal] [PubMed]
Gambino F, Pagès S, Kehayas V, Baptista D, Tatti R, Carleton A, Holtmaat A (2014) Sensory-evoked LTP driven by dendritic plateau potentials in vivo. Nature 515:116-9 [Journal] [PubMed]
Gerstner W, Kempter R, van Hemmen JL, Wagner H (1996) A neuronal learning rule for sub-millisecond temporal coding. Nature 383:76-81 [Journal] [PubMed]
Gidon A, Segev I (2012) Principles governing the operation of synaptic inhibition in dendrites. Neuron 75:330-41 [Journal] [PubMed]
   Principles governing the operation of synaptic inhibition in dendrites (Gidon & Segev 2012) [Model]
Golding NL, Staff NP, Spruston N (2002) Dendritic spikes as a mechanism for cooperative long-term potentiation. Nature 418:326-31 [Journal] [PubMed]
Goodman D, Brette R (2008) Brian: a simulator for spiking neural networks in python. Front Neuroinform 2:5 [Journal] [PubMed]
Gordon U, Polsky A, Schiller J (2006) Plasticity compartments in basal dendrites of neocortical pyramidal neurons. J Neurosci 26:12717-26 [Journal] [PubMed]
Graupner M, Brunel N (2012) Calcium-based plasticity model explains sensitivity of synaptic changes to spike pattern, rate, and dendritic location. Proc Natl Acad Sci U S A 109:3991-6 [Journal] [PubMed]
Hardie J, Spruston N (2009) Synaptic depolarization is more effective than back-propagating action potentials during induction of associative long-term potentiation in hippocampal pyramidal neurons. J Neurosci 29:3233-41 [Journal] [PubMed]
Harvey CD, Svoboda K (2007) Locally dynamic synaptic learning rules in pyramidal neuron dendrites. Nature 450:1195-200 [Journal] [PubMed]
Hawkins J, Ahmad S (2016) Why Neurons Have Thousands of Synapses, a Theory of Sequence Memory in Neocortex. Front Neural Circuits 10:23 [Journal] [PubMed]
   Theory of sequence memory in neocortex (Hawkins & Ahmad 2016) [Model]
Hebb DO (1949) The Organization Of Behavior
Hill DN, Varga Z, Jia H, Sakmann B, Konnerth A (2013) Multibranch activity in basal and tuft dendrites during firing of layer 5 cortical neurons in vivo. Proc Natl Acad Sci U S A 110:13618-23 [Journal] [PubMed]
Jadi M, Polsky A, Schiller J, Mel BW (2012) Location-dependent effects of inhibition on local spiking in pyramidal neuron dendrites. PLoS Comput Biol 8:e1002550 [Journal] [PubMed]
Jahr CE, Stevens CF (1990) Voltage dependence of NMDA-activated macroscopic conductances predicted by single-channel kinetics. J Neurosci 10:3178-82 [PubMed]
Jia H, Rochefort NL, Chen X, Konnerth A (2010) Dendritic organization of sensory input to cortical neurons in vivo. Nature 464:1307-12 [Journal] [PubMed]
Kampa BM, Letzkus JJ, Stuart GJ (2006) Requirement of dendritic calcium spikes for induction of spike-timing-dependent synaptic plasticity. J Physiol 574:283-90 [Journal] [PubMed]
Kastellakis G, Silva AJ, Poirazi P (2016) Linking Memories across Time via Neuronal and Dendritic Overlaps in Model Neurons with Active Dendrites. Cell Rep 17:1491-1504 [Journal] [PubMed]
   Model of memory linking through memory allocation (Kastellakis et al. 2016) [Model]
Katz Y, Menon V, Nicholson DA, Geinisman Y, Kath WL, Spruston N (2009) Synapse distribution suggests a two-stage model of dendritic integration in CA1 pyramidal neurons. Neuron 63:171-7 [Journal] [PubMed]
   A two-stage model of dendritic integration in CA1 pyramidal neurons (Katz et al. 2009) [Model]
Kim Y, Hsu CL, Cembrowski MS, Mensh BD, Spruston N (2015) Dendritic sodium spikes are required for long-term potentiation at distal synapses on hippocampal pyramidal neurons. Elife [Journal] [PubMed]
   CA1 pyramidal neuron: Dendritic Na+ spikes are required for LTP at distal synapses (Kim et al 2015) [Model]
Kumar A, Mehta MR (2011) Frequency-Dependent Changes in NMDAR-Dependent Synaptic Plasticity. Front Comput Neurosci 5:38 [Journal] [PubMed]
Larkum ME, Waters J, Sakmann B, Helmchen F (2007) Dendritic spikes in apical dendrites of neocortical layer 2/3 pyramidal neurons. J Neurosci 27:8999-9008 [Journal] [PubMed]
Lee KF, Soares C, Thivierge JP, Béïque JC (2016) Correlated Synaptic Inputs Drive Dendritic Calcium Amplification and Cooperative Plasticity during Clustered Synapse Development. Neuron 89:784-99 [Journal] [PubMed]
Legenstein R, Maass W (2011) Branch-specific plasticity enables self-organization of nonlinear computation in single neurons. J Neurosci 31:10787-802 [Journal] [PubMed]
Letzkus JJ, Kampa BM, Stuart GJ (2006) Learning rules for spike timing-dependent plasticity depend on dendritic synapse location. J Neurosci 26:10420-9 [Journal] [PubMed]
   STDP depends on dendritic synapse location (Letzkus et al. 2006) [Model]
Lisman J, Spruston N (2005) Postsynaptic depolarization requirements for LTP and LTD: a critique of spike timing-dependent plasticity. Nat Neurosci 8:839-41 [PubMed]
Lisman J, Spruston N (2010) Questions about STDP as a General Model of Synaptic Plasticity. Front Synaptic Neurosci 2:140 [Journal] [PubMed]
Losonczy A, Makara JK, Magee JC (2008) Compartmentalized dendritic plasticity and input feature storage in neurons. Nature 452:436-41 [Journal] [PubMed]
Major G, Larkum ME, Schiller J (2013) Active properties of neocortical pyramidal neuron dendrites. Annu Rev Neurosci 36:1-24 [Journal] [PubMed]
Major G, Polsky A, Denk W, Schiller J, Tank DW (2008) Spatiotemporally graded NMDA spike/plateau potentials in basal dendrites of neocortical pyramidal neurons. J Neurophysiol 99:2584-601 [Journal] [PubMed]
Makara JK, Losonczy A, Wen Q, Magee JC (2009) Experience-dependent compartmentalized dendritic plasticity in rat hippocampal CA1 pyramidal neurons. Nat Neurosci 12:1485-7 [Journal] [PubMed]
Markram H, Lübke J, Frotscher M, Roth A, Sakmann B (1997) Physiology and anatomy of synaptic connections between thick tufted pyramidal neurones in the developing rat neocortex. J Physiol 500 ( Pt 2):409-40 [PubMed]
Markram H, Lübke J, Frotscher M, Sakmann B (1997) Regulation of synaptic efficacy by coincidence of postsynaptic APs and EPSPs. Science 275:213-5 [PubMed]
Markram H, Toledo-Rodriguez M, Wang Y, Gupta A, Silberberg G, Wu C (2004) Interneurons of the neocortical inhibitory system. Nat Rev Neurosci 5:793-807 [Journal] [PubMed]
Mehta MR (2004) Cooperative LTP can map memory sequences on dendritic branches. Trends Neurosci 27:69-72 [Journal] [PubMed]
Mel BW (1991) The clusteron: toward a simple abstraction for a complex neuron NIPS 4:35-42
Morrison A, Diesmann M, Gerstner W (2008) Phenomenological models of synaptic plasticity based on spike timing. Biol Cybern 98:459-78 [Journal] [PubMed]
Nevian T, Larkum ME, Polsky A, Schiller J (2007) Properties of basal dendrites of layer 5 pyramidal neurons: a direct patch-clamp recording study. Nat Neurosci 10:206-14 [Journal] [PubMed]
   Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007) [Model]
Nevian T, Sakmann B (2006) Spine Ca2+ signaling in spike-timing-dependent plasticity. J Neurosci 26:11001-13 [Journal] [PubMed]
Ngezahayo A, Schachner M, Artola A (2000) Synaptic activity modulates the induction of bidirectional synaptic changes in adult mouse hippocampus. J Neurosci 20:2451-8 [PubMed]
Nicholson DA, Trana R, Katz Y, Kath WL, Spruston N, Geinisman Y (2006) Distance-dependent differences in synapse number and AMPA receptor expression in hippocampal CA1 pyramidal neurons. Neuron 50:431-42 [Journal] [PubMed]
Palmer LM, Shai AS, Reeve JE, Anderson HL, Paulsen O, Larkum ME (2014) NMDA spikes enhance action potential generation during sensory input. Nat Neurosci 17:383-90 [Journal] [PubMed]
Pfister JP, Gerstner W (2006) Triplets of spikes in a model of spike timing-dependent plasticity. J Neurosci 26:9673-82 [Journal] [PubMed]
Poirazi P, Mel BW (2001) Impact of active dendrites and structural plasticity on the memory capacity of neural tissue. Neuron 29:779-96 [PubMed]
Roxin A, Fusi S (2013) Efficient partitioning of memory systems and its importance for memory consolidation. PLoS Comput Biol 9:e1003146 [Journal] [PubMed]
Sandler M, Shulman Y, Schiller J (2016) A Novel Form of Local Plasticity in Tuft Dendrites of Neocortical Somatosensory Layer 5 Pyramidal Neurons. Neuron 90:1028-42 [Journal] [PubMed]
Schiller J, Major G, Koester HJ, Schiller Y (2000) NMDA spikes in basal dendrites of cortical pyramidal neurons. Nature 404:285-9 [Journal] [PubMed]
Schiller J, Schiller Y, Stuart G, Sakmann B (1997) Calcium action potentials restricted to distal apical dendrites of rat neocortical pyramidal neurons. J Physiol 505 ( Pt 3):605-16 [PubMed]
Schulz JM (2010) Synaptic Plasticity in vivo: More than Just Spike-Timing? Front Synaptic Neurosci 2:150 [Journal] [PubMed]
Shouval HZ, Bear MF, Cooper LN (2002) A unified model of NMDA receptor-dependent bidirectional synaptic plasticity. Proc Natl Acad Sci U S A 99:10831-6 [Journal] [PubMed]
Shouval HZ, Wang SS, Wittenberg GM (2010) Spike timing dependent plasticity: a consequence of more fundamental learning rules. Front Comput Neurosci [Journal] [PubMed]
Sjöström PJ, Häusser M (2006) A cooperative switch determines the sign of synaptic plasticity in distal dendrites of neocortical pyramidal neurons. Neuron 51:227-38 [Journal] [PubMed]
Sjöström PJ, Turrigiano GG, Nelson SB (2001) Rate, timing, and cooperativity jointly determine cortical synaptic plasticity. Neuron 32:1149-64 [PubMed]
Stent GS (1973) A physiological mechanism for Hebb's postulate of learning. Proc Natl Acad Sci U S A 70:997-1001 [PubMed]
Takahashi H, Magee JC (2009) Pathway interactions and synaptic plasticity in the dendritic tuft regions of CA1 pyramidal neurons. Neuron 62:102-11 [Journal] [PubMed]
Thalmeier D, Uhlmann M, Kappen HJ, Memmesheimer RM (2016) Learning Universal Computations with Spikes. PLoS Comput Biol 12:e1004895 [Journal] [PubMed]
Triesch J (2007) Synergies between intrinsic and synaptic plasticity mechanisms. Neural Comput 19:885-909 [Journal] [PubMed]
Turrigiano G (2011) Too many cooks? Intrinsic and synaptic homeostatic mechanisms in cortical circuit refinement. Annu Rev Neurosci 34:89-103 [Journal] [PubMed]
Turrigiano G (2012) Homeostatic synaptic plasticity: local and global mechanisms for stabilizing neuronal function. Cold Spring Harb Perspect Biol 4:a005736 [Journal] [PubMed]
Turrigiano GG, Nelson SB (2004) Homeostatic plasticity in the developing nervous system. Nat Rev Neurosci 5:97-107 [Journal] [PubMed]
Urbanczik R, Senn W (2014) Learning by the dendritic prediction of somatic spiking. Neuron 81:521-8 [Journal] [PubMed]
Wang HX, Gerkin RC, Nauen DW, Bi GQ (2005) Coactivation and timing-dependent integration of synaptic potentiation and depression. Nat Neurosci 8:187-93 [Journal] [PubMed]
Waters J, Larkum M, Sakmann B, Helmchen F (2003) Supralinear Ca2+ influx into dendritic tufts of layer 2/3 neocortical pyramidal neurons in vitro and in vivo. J Neurosci 23:8558-67 [PubMed]
Watt AJ, van Rossum MC, MacLeod KM, Nelson SB, Turrigiano GG (2000) Activity coregulates quantal AMPA and NMDA currents at neocortical synapses. Neuron 26:659-70 [PubMed]
Weber JP, Andrásfalvy BK, Polito M, Magó Á, Ujfalussy BB, Makara JK (2016) Location-dependent synaptic plasticity rules by dendritic spine cooperativity. Nat Commun 7:11380 [Journal] [PubMed]
Wilmes KA, Sprekeler H, Schreiber S (2016) Inhibition as a Binary Switch for Excitatory Plasticity in Pyramidal Neurons. PLoS Comput Biol 12:e1004768 [Journal] [PubMed]
   Inhibition of bAPs and Ca2+ spikes in a multi-compartment pyramidal neuron model (Wilmes et al 2016) [Model]
Yger P,Gilson M (2015) Models of metaplasticity: a review of concepts Front. Comput. Neurosci. 9:1-14
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