Citation Relationships

Legends: Link to a Model Reference cited by multiple papers


Anderson RW, Farokhniaee A, Gunalan K, Howell B, McIntyre CC (2018) Action potential initiation, propagation, and cortical invasion in the hyperdirect pathway during subthalamic deep brain stimulation Brain Stimulation

   AP initiation, propagation, and cortical invasion in a Layer 5 pyramidal cell (Anderson et 2018)

References and models cited by this paper

References and models that cite this paper

Ackermann DM, Bhadra N, Gerges M, Thomas PJ (2011) Dynamics and sensitivity analysis of high-frequency conduction block. J Neural Eng 8:065007 [Journal] [PubMed]
Anderson TR, Hu B, Iremonger K, Kiss ZH (2006) Selective attenuation of afferent synaptic transmission as a mechanism of thalamic deep brain stimulation-induced tremor arrest. J Neurosci 26:841-50 [Journal] [PubMed]
Angulo MC, Rossier J, Audinat E (1999) Postsynaptic glutamate receptors and integrative properties of fast-spiking interneurons in the rat neocortex. J Neurophysiol 82:1295-302 [Journal] [PubMed]
Antic SD, Empson RM, Knöpfel T (2016) Voltage imaging to understand connections and functions of neuronal circuits. J Neurophysiol 116:135-52 [Journal] [PubMed]
Ashby P, Paradiso G, Saint-Cyr JA, Chen R, Lang AE, Lozano AM (2001) Potentials recorded at the scalp by stimulation near the human subthalamic nucleus. Clin Neurophysiol 112:431-7 [PubMed]
Baker KB, Montgomery EB, Rezai AR, Burgess R, Lüders HO (2002) Subthalamic nucleus deep brain stimulus evoked potentials: physiological and therapeutic implications. Mov Disord 17:969-83 [Journal] [PubMed]
Binzegger T, Douglas RJ, Martin KA (2005) Axons in cat visual cortex are topologically self-similar. Cereb Cortex 15:152-65 [Journal] [PubMed]
Catterall WA, Few AP (2008) Calcium channel regulation and presynaptic plasticity. Neuron 59:882-901 [Journal] [PubMed]
Chomiak T, Hu B (2007) Axonal and somatic filtering of antidromically evoked cortical excitation by simulated deep brain stimulation in rat brain. J Physiol 579:403-12 [Journal] [PubMed]
Cole SR, van der Meij R, Peterson EJ, de Hemptinne C, Starr PA, Voytek B (2017) Nonsinusoidal Beta Oscillations Reflect Cortical Pathophysiology in Parkinson's Disease. J Neurosci 37:4830-4840 [Journal] [PubMed]
de Hemptinne C, Swann NC, Ostrem JL, Ryapolova-Webb ES, San Luciano M, Galifianakis NB, Starr PA (2015) Therapeutic deep brain stimulation reduces cortical phase-amplitude coupling in Parkinson's disease. Nat Neurosci 18:779-86 [Journal] [PubMed]
Dejean C, Hyland B, Arbuthnott G (2009) Cortical effects of subthalamic stimulation correlate with behavioral recovery from dopamine antagonist induced akinesia. Cereb Cortex 19:1055-63 [Journal] [PubMed]
Devos D, Labyt E, Derambure P, Bourriez JL, Cassim F, Reyns N, Blond S, Guieu JD, Destée A, Defebvre L (2004) Subthalamic nucleus stimulation modulates motor cortex oscillatory activity in Parkinson's disease. Brain 127:408-19 [Journal] [PubMed]
Faisal AA, Laughlin SB (2007) Stochastic simulations on the reliability of action potential propagation in thin axons. PLoS Comput Biol 3:e79 [Journal] [PubMed]
Farokhniaee A,Anderson RW,McIntyre CC (2017) Deep brain stimulation induced synaptic depletion is a robust phenomenon independent of synapse type Soc. Neurosci. Abstr., 663.17, Washington, DC
Firmin L, Field P, Maier MA, Kraskov A, Kirkwood PA, Nakajima K, Lemon RN, Glickstein M (2014) Axon diameters and conduction velocities in the macaque pyramidal tract. J Neurophysiol 112:1229-40 [Journal] [PubMed]
Frick A, Feldmeyer D, Helmstaedter M, Sakmann B (2008) Monosynaptic connections between pairs of L5A pyramidal neurons in columns of juvenile rat somatosensory cortex. Cereb Cortex 18:397-406 [Journal] [PubMed]
Goldstein SS, Rall W (1974) Changes of action potential shape and velocity for changing core conductor geometry. Biophys J 14:731-57 [Journal] [PubMed]
Gradinaru V, Mogri M, Thompson KR, Henderson JM, Deisseroth K (2009) Optical deconstruction of parkinsonian neural circuitry. Science 324:354-9 [Journal] [PubMed]
Grill WM, Cantrell MB, Robertson MS (2008) Antidromic propagation of action potentials in branched axons: implications for the mechanisms of action of deep brain stimulation. J Comput Neurosci 24:81-93 [Journal] [PubMed]
Grossman Y, Parnas I, Spira ME (1979) Mechanisms involved in differential conduction of potentials at high frequency in a branching axon. J Physiol 295:307-22 [PubMed]
Gunalan K, Chaturvedi A, Howell B, Duchin Y, Lempka SF, Patriat R, Sapiro G, Harel N, McIntyre CC (2017) Creating and parameterizing patient-specific deep brain stimulation pathway-activation models using the hyperdirect pathway as an example. PLoS One 12:e0176132 [Journal] [PubMed]
Haynes WI, Haber SN (2013) The organization of prefrontal-subthalamic inputs in primates provides an anatomical substrate for both functional specificity and integration: implications for Basal Ganglia models and deep brain stimulation. J Neurosci 33:4804-14 [Journal] [PubMed]
Howell B, McIntyre CC (2017) Role of Soft-Tissue Heterogeneity in Computational Models of Deep Brain Stimulation. Brain Stimul 10:46-50 [Journal] [PubMed]
Hu W, Tian C, Li T, Yang M, Hou H, Shu Y (2009) Distinct contributions of Na(v)1.6 and Na(v)1.2 in action potential initiation and backpropagation. Nat Neurosci 12:996-1002 [Journal] [PubMed]
   Action Potential initiation and backpropagation in Neocortical L5 Pyramidal Neuron (Hu et al. 2009) [Model]
Iremonger KJ, Anderson TR, Hu B, Kiss ZH (2006) Cellular mechanisms preventing sustained activation of cortex during subcortical high-frequency stimulation. J Neurophysiol 96:613-21 [Journal] [PubMed]
Jensen AL, Durand DM (2009) High frequency stimulation can block axonal conduction. Exp Neurol 220:57-70 [Journal] [PubMed]
Kang G, Lowery MM (2014) Effects of antidromic and orthodromic activation of STN afferent axons during DBS in Parkinson's disease: a simulation study. Front Comput Neurosci 8:32 [Journal] [PubMed]
Kita T, Kita H (2012) The subthalamic nucleus is one of multiple innervation sites for long-range corticofugal axons: a single-axon tracing study in the rat. J Neurosci 32:5990-9 [Journal] [PubMed]
Kita T, Osten P, Kita H (2014) Rat subthalamic nucleus and zona incerta share extensively overlapped representations of cortical functional territories. J Comp Neurol 522:4043-56 [Journal] [PubMed]
Kumaravelu K, Brocker DT, Grill WM (2016) A biophysical model of the cortex-basal ganglia-thalamus network in the 6-OHDA lesioned rat model of Parkinson's disease. J Comput Neurosci 40:207-29 [Journal] [PubMed]
   Cortex-Basal Ganglia-Thalamus network model (Kumaravelu et al. 2016) [Model]
Kuriakose R, Saha U, Castillo G, Udupa K, Ni Z, Gunraj C, Mazzella F, Hamani C, Lang AE, Moro E, Lozano AM, Hodaie M, Chen R (2010) The nature and time course of cortical activation following subthalamic stimulation in Parkinson's disease. Cereb Cortex 20:1926-36 [Journal] [PubMed]
Li Q, Ke Y, Chan DC, Qian ZM, Yung KK, Ko H, Arbuthnott GW, Yung WH (2012) Therapeutic deep brain stimulation in Parkinsonian rats directly influences motor cortex. Neuron 76:1030-41 [Journal] [PubMed]
Li Q, Qian ZM, Arbuthnott GW, Ke Y, Yung WH (2014) Cortical effects of deep brain stimulation: implications for pathogenesis and treatment of Parkinson disease. JAMA Neurol 71:100-3 [Journal] [PubMed]
Li S, Arbuthnott GW, Jutras MJ, Goldberg JA, Jaeger D (2007) Resonant antidromic cortical circuit activation as a consequence of high-frequency subthalamic deep-brain stimulation. J Neurophysiol 98:3525-37 [Journal] [PubMed]
Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ (1995) A model of spike initiation in neocortical pyramidal neurons. Neuron 15:1427-39 [PubMed]
   Spike Initiation in Neocortical Pyramidal Neurons (Mainen et al 1995) [Model]
Manor Y, Koch C, Segev I (1991) Effect of geometrical irregularities on propagation delay in axonal trees. Biophys J 60:1424-37 [Journal] [PubMed]
Markram H, Muller E, Ramaswamy S, Reimann MW, Abdellah M, Sanchez CA, Ailamaki A, Alonso-Nanclares L, Antille N, Arsever S, Kahou GA, Berger TK, Bilgili A, Buncic N, Chalimourda A, Chindemi G, Courcol JD, Delalondre F, Delattre V, Druckmann S, Dumusc R, Dynes J, Eilemann S, Gal E, Gevaert ME, Ghobril JP, Gidon A, Graham JW, Gupta A, Haenel V, Hay E, Heinis T, Hernando JB, Hines M, Kanari L, Keller D, Kenyon J, Khazen G, Kim Y, King JG, Kisvarday Z, Kumbhar P, Lasserre S, Le Bé JV, Magalhães BR, Merchán-Pérez A, Meystre J, Morrice BR, Muller J, Muñoz-Céspedes A, Muralidhar S, Muthurasa K, Nachbaur D, Newton TH, Nolte M, Ovcharenko A, Palacios J, Pastor L, Perin R, Ranjan R, Riachi I, Rodríguez JR, Riquelme JL, Rössert C, Sfyrakis K, Shi Y, Shillcock JC, Silberberg G, Silva R, Tauheed F, Telefont M, Toledo-Rodriguez M, Tränkler T, Van Geit W, Díaz JV, Walker R, Wang Y, Zaninetta SM (2015) Reconstruction and Simulation of Neocortical Microcircuitry. Cell 163:456-92 [Journal] [PubMed]
   The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]
Mathai A, Ma Y, Paré JF, Villalba RM, Wichmann T, Smith Y (2015) Reduced cortical innervation of the subthalamic nucleus in MPTP-treated parkinsonian monkeys. Brain 138:946-62 [Journal] [PubMed]
Mathai A, Wichmann T, Smith Y (2013) More than meets the eye-myelinated axons crowd the subthalamic nucleus. Mov Disord 28:1811-5 [Journal] [PubMed]
McNeal DR (1976) Analysis of a model for excitation of myelinated nerve. IEEE Trans Biomed Eng 23:329-37 [PubMed]
Nambu A, Tokuno H, Inase M, Takada M (1997) Corticosubthalamic input zones from forelimb representations of the dorsal and ventral divisions of the premotor cortex in the macaque monkey: comparison with the input zones from the primary motor cortex and the supplementary motor area. Neurosci Lett 239:13-6 [PubMed]
Neher E (2015) Merits and Limitations of Vesicle Pool Models in View of Heterogeneous Populations of Synaptic Vesicles. Neuron 87:1131-1142 [Journal] [PubMed]
Neher E, Sakaba T (2008) Multiple roles of calcium ions in the regulation of neurotransmitter release. Neuron 59:861-72 [Journal] [PubMed]
Papp EA, Leergaard TB, Calabrese E, Johnson GA, Bjaalie JG (2014) Waxholm Space atlas of the Sprague Dawley rat brain. Neuroimage 97:374-86 [Journal] [PubMed]
Popovic MA, Foust AJ, McCormick DA, Zecevic D (2011) The spatio-temporal characteristics of action potential initiation in layer 5 pyramidal neurons: a voltage imaging study. J Physiol 589:4167-87 [Journal] [PubMed]
Qiu X, Zhu Q, Sun J (2015) Quantitative analysis of vesicle recycling at the calyx of Held synapse. Proc Natl Acad Sci U S A 112:4779-84 [Journal] [PubMed]
Ramaswamy S, Markram H (2015) Anatomy and physiology of the thick-tufted layer 5 pyramidal neuron. Front Cell Neurosci 9:233 [Journal] [PubMed]
Rosenbaum R, Rubin J, Doiron B (2012) Short term synaptic depression imposes a frequency dependent filter on synaptic information transfer. PLoS Comput Biol 8:e1002557 [Journal] [PubMed]
Rosenbaum R, Zimnik A, Zheng F, Turner RS, Alzheimer C, Doiron B, Rubin JE (2014) Axonal and synaptic failure suppress the transfer of firing rate oscillations, synchrony and information during high frequency deep brain stimulation. Neurobiol Dis 62:86-99 [Journal] [PubMed]
Sakaba T (2006) Roles of the fast-releasing and the slowly releasing vesicles in synaptic transmission at the calyx of Held. J Neurosci 26:5863-71 [Journal] [PubMed]
Sanders TH, Jaeger D (2016) Optogenetic stimulation of cortico-subthalamic projections is sufficient to ameliorate bradykinesia in 6-ohda lesioned mice. Neurobiol Dis 95:225-37 [Journal] [PubMed]
Santaniello S, McCarthy MM, Montgomery EB, Gale JT, Kopell N, Sarma SV (2015) Therapeutic mechanisms of high-frequency stimulation in Parkinson's disease and neural restoration via loop-based reinforcement. Proc Natl Acad Sci U S A 112:E586-95 [Journal] [PubMed]
Sherman MA, Lee S, Law R, Haegens S, Thorn CA, Hämäläinen MS, Moore CI, Jones SR (2016) Neural mechanisms of transient neocortical beta rhythms: Converging evidence from humans, computational modeling, monkeys, and mice. Proc Natl Acad Sci U S A 113:E4885-94 [Journal] [PubMed]
Shu Y, Duque A, Yu Y, Haider B, McCormick DA (2007) Properties of action-potential initiation in neocortical pyramidal cells: evidence from whole cell axon recordings. J Neurophysiol 97:746-60 [Journal] [PubMed]
   Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007) [Model]
Tass PA, Qin L, Hauptmann C, Dovero S, Bezard E, Boraud T, Meissner WG (2012) Coordinated reset has sustained aftereffects in Parkinsonian monkeys. Ann Neurol 72:816-20 [Journal] [PubMed]
Thanawala MS, Regehr WG (2016) Determining synaptic parameters using high-frequency activation. J Neurosci Methods 264:136-152 [Journal] [PubMed]
Tinkhauser G, Pogosyan A, Little S, Beudel M, Herz DM, Tan H, Brown P (2017) The modulatory effect of adaptive deep brain stimulation on beta bursts in Parkinson's disease. Brain 140:1053-1067 [Journal] [PubMed]
Tsodyks MV, Markram H (1997) The neural code between neocortical pyramidal neurons depends on neurotransmitter release probability. Proc Natl Acad Sci U S A 94:719-23 [PubMed]
Urbano FJ, Leznik E, Llinas RR (2002) Cortical activation patterns evoked by afferent axons stimuli at different frequencies: an in vitro voltage-sensitive dye imaging study Thalamus Rel Syst 1:371-378
Walker HC, Huang H, Gonzalez CL, Bryant JE, Killen J, Cutter GR, Knowlton RC, Montgomery EB, Guthrie BL, Watts RL (2012) Short latency activation of cortex during clinically effective subthalamic deep brain stimulation for Parkinson's disease. Mov Disord 27:864-73 [Journal] [PubMed]
Wang J, Nebeck S, Muralidharan A, Johnson MD, Vitek JL, Baker KB (2016) Coordinated Reset Deep Brain Stimulation of Subthalamic Nucleus Produces Long-Lasting, Dose-Dependent Motor Improvements in the 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine Non-Human Primate Model of Parkinsonism. Brain Stimul 9:609-17 [Journal] [PubMed]
Wang LY, Kaczmarek LK (1998) High-frequency firing helps replenish the readily releasable pool of synaptic vesicles. Nature 394:384-8 [Journal] [PubMed]
Weiss D, Klotz R, Govindan RB, Scholten M, Naros G, Ramos-Murguialday A, Bunjes F, Meisner C, Plewnia C, Krüger R, Gharabaghi A (2015) Subthalamic stimulation modulates cortical motor network activity and synchronization in Parkinson's disease. Brain 138:679-93 [Journal] [PubMed]
Whitmer D, de Solages C, Hill B, Yu H, Henderson JM, Bronte-Stewart H (2012) High frequency deep brain stimulation attenuates subthalamic and cortical rhythms in Parkinson's disease. Front Hum Neurosci 6:155 [Journal] [PubMed]
Zhou L, Chiu SY (2001) Computer model for action potential propagation through branch point in myelinated nerves. J Neurophysiol 85:197-210 [Journal] [PubMed]
(67 refs)