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Deitcher Y, Eyal G, Kanari L, Verhoog MB, Atenekeng Kahou GA, Mansvelder HD, de Kock CPJ, Segev I (2017) Comprehensive Morpho-Electrotonic Analysis Shows 2 Distinct Classes of L2 and L3 Pyramidal Neurons in Human Temporal Cortex. Cereb Cortex 27:5398-5414 [PubMed]

   2 Distinct Classes of L2 and L3 Pyramidal Neurons in Human Temporal Cortex (Deitcher et al 2017)

References and models cited by this paper

References and models that cite this paper

Alloway KD (2008) Information processing streams in rodent barrel cortex: the differential functions of barrel and septal circuits. Cereb Cortex 18:979-89 [Journal] [PubMed]
Aronoff R, Matyas F, Mateo C, Ciron C, Schneider B, Petersen CC (2010) Long-range connectivity of mouse primary somatosensory barrel cortex. Eur J Neurosci 31:2221-33 [Journal] [PubMed]
Benavides-Piccione R, Fernaud-Espinosa I, Robles V, Yuste R, DeFelipe J (2013) Age-based comparison of human dendritic spine structure using complete three-dimensional reconstructions. Cereb Cortex 23:1798-810 [Journal] [PubMed]
Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing Jr Stat Soc Ser B 57:289-300
Berger T, Larkum ME, Lüscher HR (2001) High I(h) channel density in the distal apical dendrite of layer V pyramidal cells increases bidirectional attenuation of EPSPs. J Neurophysiol 85:855-68 [Journal] [PubMed]
Callaway EM (2004) Feedforward, feedback and inhibitory connections in primate visual cortex. Neural Netw 17:625-32 [Journal] [PubMed]
Carlsson G (2009) Topology and data Bull N Ser Am Math Soc 46:255-308
Chen X, Leischner U, Rochefort NL, Nelken I, Konnerth A (2011) Functional mapping of single spines in cortical neurons in vivo. Nature 475:501-5 [Journal] [PubMed]
Constantinople CM, Bruno RM (2013) Deep cortical layers are activated directly by thalamus. Science 340:1591-4 [Journal] [PubMed]
Cuntz H, Forstner F, Borst A, Häusser M (2010) One rule to grow them all: a general theory of neuronal branching and its practical application. PLoS Comput Biol [Journal] [PubMed]
de Kock CP, Bruno RM, Spors H, Sakmann B (2007) Layer- and cell-type-specific suprathreshold stimulus representation in rat primary somatosensory cortex. J Physiol 581:139-54 [Journal] [PubMed]
de Kock CP, Sakmann B (2009) Spiking in primary somatosensory cortex during natural whisking in awake head-restrained rats is cell-type specific. Proc Natl Acad Sci U S A 106:16446-50 [Journal] [PubMed]
Defelipe J (2011) The evolution of the brain, the human nature of cortical circuits, and intellectual creativity. Front Neuroanat 5:29 [Journal] [PubMed]
DeFelipe J, Alonso-Nanclares L, Arellano JI (2002) Microstructure of the neocortex: comparative aspects. J Neurocytol 31:299-316 [PubMed]
Duda RO,Hart PE,Stork DG (2001) Pattern Classification
Egger R, Schmitt AC, Wallace DJ, Sakmann B, Oberlaender M, Kerr JN (2015) Robustness of sensory-evoked excitation is increased by inhibitory inputs to distal apical tuft dendrites. Proc Natl Acad Sci U S A 112:14072-7 [Journal] [PubMed]
   Distal inhibitory control of sensory-evoked excitation (Egger, Schmitt et al. 2015) [Model]
Elston GN, Benavides-Piccione R, DeFelipe J (2001) The pyramidal cell in cognition: a comparative study in human and monkey. J Neurosci 21:RC163 [PubMed]
Elston GN, Benavides-Piccione R, Defelipe J (2005) A study of pyramidal cell structure in the cingulate cortex of the macaque monkey with comparative notes on inferotemporal and primary visual cortex. Cereb Cortex 15:64-73 [Journal] [PubMed]
Evgeniou T,Pontil M,Elisseeff A (2004) Leave one out error, stability, and generalization of voting combinations of classifiers Mach Learn 55:71-97
Feldmeyer D (2012) Excitatory neuronal connectivity in the barrel cortex. Front Neuroanat 6:24 [Journal] [PubMed]
Fernandez-Gonzalez P, Benavides-Piccione R, Leguey I, Bielza C, Larrañaga P, DeFelipe J (2017) Dendritic-branching angles of pyramidal neurons of the human cerebral cortex. Brain Struct Funct 222:1847-1859 [Journal] [PubMed]
Fortier E, Noreau A, Lepore F, Boivin M, Pérusse D, Rouleau GA, Beauregard M (2011) Early influence of the rs4675690 on the neural substrates of sadness. J Affect Disord 135:336-40 [Journal] [PubMed]
Gao WJ, Zheng ZH (2004) Target-specific differences in somatodendritic morphology of layer V pyramidal neurons in rat motor cortex. J Comp Neurol 476:174-85 [Journal] [PubMed]
Grienberger C, Chen X, Konnerth A (2015) Dendritic function in vivo. Trends Neurosci 38:45-54 [Journal] [PubMed]
Groh A, de Kock CP, Wimmer VC, Sakmann B, Kuner T (2008) Driver or coincidence detector: modal switch of a corticothalamic giant synapse controlled by spontaneous activity and short-term depression. J Neurosci 28:9652-63 [Journal] [PubMed]
Hallman LE, Schofield BR, Lin CS (1988) Dendritic morphology and axon collaterals of corticotectal, corticopontine, and callosal neurons in layer V of primary visual cortex of the hooded rat. J Comp Neurol 272:149-60 [Journal] [PubMed]
Harnett MT, Magee JC, Williams SR (2015) Distribution and function of HCN channels in the apical dendritic tuft of neocortical pyramidal neurons. J Neurosci 35:1024-37 [Journal] [PubMed]
Hay E, Schürmann F, Markram H, Segev I (2013) Preserving axosomatic spiking features despite diverse dendritic morphology. J Neurophysiol 109:2972-81 [Journal] [PubMed]
   Preserving axosomatic spiking features despite diverse dendritic morphology (Hay et al., 2013) [Model]
Hübener M, Schwarz C, Bolz J (1990) Morphological types of projection neurons in layer 5 of cat visual cortex. J Comp Neurol 301:655-74 [Journal] [PubMed]
Inda MC, DeFelipe J, Muñoz A (2006) Voltage-gated ion channels in the axon initial segment of human cortical pyramidal cells and their relationship with chandelier cells. Proc Natl Acad Sci U S A 103:2920-5 [Journal] [PubMed]
Kanari L, Dlotko P, Scolamiero M, Levi R, Shillcock J, Hess K, Markram H (2018) A Topological Representation of Branching Neuronal Morphologies. Neuroinformatics 16:3-13 [Journal] [PubMed]
Köhling R, Avoli M (2006) Methodological approaches to exploring epileptic disorders in the human brain in vitro. J Neurosci Methods 155:1-19 [Journal] [PubMed]
Kole MH, Hallermann S, Stuart GJ (2006) Single Ih channels in pyramidal neuron dendrites: properties, distribution, and impact on action potential output. J Neurosci 26:1677-87 [Journal] [PubMed]
   Stochastic Ih and Na-channels in pyramidal neuron dendrites (Kole et al 2006) [Model]
Larkum ME, Nevian T, Sandler M, Polsky A, Schiller J (2009) Synaptic integration in tuft dendrites of layer 5 pyramidal neurons: a new unifying principle. Science 325:756-60 [Journal] [PubMed]
   Synaptic integration in tuft dendrites of layer 5 pyramidal neurons (Larkum et al. 2009) [Model]
Larkum ME, Waters J, Sakmann B, Helmchen F (2007) Dendritic spikes in apical dendrites of neocortical layer 2/3 pyramidal neurons. J Neurosci 27:8999-9008 [Journal] [PubMed]
Larsen DD, Wickersham IR, Callaway EM (2007) Retrograde tracing with recombinant rabies virus reveals correlations between projection targets and dendritic architecture in layer 5 of mouse barrel cortex. Front Neural Circuits 1:5 [Journal] [PubMed]
Li LY, Ji XY, Liang F, Li YT, Xiao Z, Tao HW, Zhang LI (2014) A feedforward inhibitory circuit mediates lateral refinement of sensory representation in upper layer 2/3 of mouse primary auditory cortex. J Neurosci 34:13670-83 [Journal] [PubMed]
Lörincz A, Notomi T, Tamás G, Shigemoto R, Nusser Z (2002) Polarized and compartment-dependent distribution of HCN1 in pyramidal cell dendrites. Nat Neurosci 5:1185-93 [Journal] [PubMed]
Magee JC (1998) Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. J Neurosci 18:7613-24 [PubMed]
Major G, Larkum ME, Schiller J (2013) Active properties of neocortical pyramidal neuron dendrites. Annu Rev Neurosci 36:1-24 [Journal] [PubMed]
Marx M, Feldmeyer D (2013) Morphology and physiology of excitatory neurons in layer 6b of the somatosensory rat barrel cortex. Cereb Cortex 23:2803-17 [Journal] [PubMed]
Mason A, Larkman A (1990) Correlations between morphology and electrophysiology of pyramidal neurons in slices of rat visual cortex. II. Electrophysiology. J Neurosci 10:1415-28 [PubMed]
Meyer HS, Wimmer VC, Oberlaender M, de Kock CP, Sakmann B, Helmstaedter M (2010) Number and laminar distribution of neurons in a thalamocortical projection column of rat vibrissal cortex. Cereb Cortex 20:2277-86 [Journal] [PubMed]
Mirz F, Ovesen T, Ishizu K, Johannsen P, Madsen S, Gjedde A, Pedersen CB (1999) Stimulus-dependent central processing of auditory stimuli: a PET study. Scand Audiol 28:161-9 [PubMed]
Molnár G, Oláh S, Komlósi G, Füle M, Szabadics J, Varga C, Barzó P, Tamás G (2008) Complex events initiated by individual spikes in the human cerebral cortex. PLoS Biol 6:e222 [Journal] [PubMed]
Morishima M, Kawaguchi Y (2006) Recurrent connection patterns of corticostriatal pyramidal cells in frontal cortex. J Neurosci 26:4394-405 [Journal] [PubMed]
Muir DR, Da Costa NM, Girardin CC, Naaman S, Omer DB, Ruesch E, Grinvald A, Douglas RJ (2011) Embedding of cortical representations by the superficial patch system. Cereb Cortex 21:2244-60 [Journal] [PubMed]
Narayanan RT, Egger R, Johnson AS, Mansvelder HD, Sakmann B, de Kock CP, Oberlaender M (2015) Beyond Columnar Organization: Cell Type- and Target Layer-Specific Principles of Horizontal Axon Projection Patterns in Rat Vibrissal Cortex. Cereb Cortex 25:4450-68 [Journal] [PubMed]
Nieuwenhuys R (1994) The neocortex. An overview of its evolutionary development, structural organization and synaptology. Anat Embryol (Berl) 190:307-37 [PubMed]
Nolan MF, Malleret G, Dudman JT, Buhl DL, Santoro B, Gibbs E, Vronskaya S, Buzsáki G, Siegelbaum SA, Kandel ER, Morozov A (2004) A behavioral role for dendritic integration: HCN1 channels constrain spatial memory and plasticity at inputs to distal dendrites of CA1 pyramidal neurons. Cell 119:719-32 [Journal] [PubMed]
Oberlaender M, Boudewijns ZS, Kleele T, Mansvelder HD, Sakmann B, de Kock CP (2011) Three-dimensional axon morphologies of individual layer 5 neurons indicate cell type-specific intracortical pathways for whisker motion and touch. Proc Natl Acad Sci U S A 108:4188-93 [Journal] [PubMed]
Oberlaender M, de Kock CP, Bruno RM, Ramirez A, Meyer HS, Dercksen VJ, Helmstaedter M, Sakmann B (2012) Cell type-specific three-dimensional structure of thalamocortical circuits in a column of rat vibrissal cortex. Cereb Cortex 22:2375-91 [Journal] [PubMed]
Pedregosa F,Varoquaux G,Gramfort A,Michel V,Thirion B,Grisel O,et al (2011) Scikit-learn: Machine Learning in Python J Mach Learn Res. 12:2825-2830
Poirazi P, Mel BW (2001) Impact of active dendrites and structural plasticity on the memory capacity of neural tissue. Neuron 29:779-96 [PubMed]
Qi G, Radnikow G, Feldmeyer D (2015) Electrophysiological and morphological characterization of neuronal microcircuits in acute brain slices using paired patch-clamp recordings. J Vis Exp :52358 [Journal] [PubMed]
RALL W (1959) Branching dendritic trees and motoneuron membrane resistivity. Exp Neurol 1:491-527 [PubMed]
Ramaswamy S, Hill SL, King JG, Schürmann F, Wang Y, Markram H (2012) Intrinsic morphological diversity of thick-tufted layer 5 pyramidal neurons ensures robust and invariant properties of in silico synaptic connections. J Physiol 590:737-52 [Journal] [PubMed]
Rapp M, Yarom Y, Segev I (1992) The impact of parallel fiber background activity on the cable properties of cerebellar Purkinje cells Neural Comput 4:518-533
Reimann MW, Horlemann AL, Ramaswamy S, Muller EB, Markram H (2017) Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity. Cereb Cortex 27:4570-4585 [Journal] [PubMed]
   The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]
Sakata S, Harris KD (2009) Laminar structure of spontaneous and sensory-evoked population activity in auditory cortex. Neuron 64:404-18 [Journal] [PubMed]
Staiger JF, Bojak I, Miceli S, Schubert D (2015) A gradual depth-dependent change in connectivity features of supragranular pyramidal cells in rat barrel cortex. Brain Struct Funct 220:1317-37 [Journal] [PubMed]
Szabadics J, Varga C, Molnár G, Oláh S, Barzó P, Tamás G (2006) Excitatory effect of GABAergic axo-axonic cells in cortical microcircuits. Science 311:233-5 [Journal] [PubMed]
Takahashi N, Oertner TG, Hegemann P, Larkum ME (2016) Active cortical dendrites modulate perception. Science 354:1587-1590 [Journal] [PubMed]
Testa-Silva G, Verhoog MB, Linaro D, de Kock CP, Baayen JC, Meredith RM, De Zeeuw CI, Giugliano M, Mansvelder HD (2014) High bandwidth synaptic communication and frequency tracking in human neocortex. PLoS Biol 12:e1002007 [Journal] [PubMed]
Tian C, Wang K, Ke W, Guo H, Shu Y (2014) Molecular identity of axonal sodium channels in human cortical pyramidal cells. Front Cell Neurosci 8:297 [Journal] [PubMed]
Uw S,Ng AY,Jordan MI,Weiss Y (2001) On spectral clustering: analysis and an algorithm Adv Neural Inf Process Syst 14:849-856
van Aerde KI, Feldmeyer D (2015) Morphological and physiological characterization of pyramidal neuron subtypes in rat medial prefrontal cortex. Cereb Cortex 25:788-805 [Journal] [PubMed]
Varga C, Tamas G, Barzo P, Olah S, Somogyi P (2015) Molecular and Electrophysiological Characterization of GABAergic Interneurons Expressing the Transcription Factor COUP-TFII in the Adult Human Temporal Cortex. Cereb Cortex 25:4430-49 [Journal] [PubMed]
Verhoog MB, Goriounova NA, Obermayer J, Stroeder J, Hjorth JJ, Testa-Silva G, Baayen JC, de Kock CP, Meredith RM, Mansvelder HD (2013) Mechanisms underlying the rules for associative plasticity at adult human neocortical synapses. J Neurosci 33:17197-208 [Journal] [PubMed]
Wahl-Schott C, Biel M (2009) HCN channels: structure, cellular regulation and physiological function. Cell Mol Life Sci 66:470-94 [Journal] [PubMed]
Wang B, Ke W, Guang J, Chen G, Yin L, Deng S, He Q, Liu Y, He T, Zheng R, Jiang Y, Zhang X, Li T, Luan G, Lu HD, Zhang M, Zhang X, Shu Y (2016) Firing Frequency Maxima of Fast-Spiking Neurons in Human, Monkey, and Mouse Neocortex. Front Cell Neurosci 10:239 [Journal] [PubMed]
Wang B, Yin L, Zou X, Ye M, Liu Y, He T, Deng S, Jiang Y, Zheng R, Wang Y, Yang M, Lu H, Wu S, Shu Y (2015) A Subtype of Inhibitory Interneuron with Intrinsic Persistent Activity in Human and Monkey Neocortex. Cell Rep 10:1450-1458 [Journal] [PubMed]
Wang M, Ramos BP, Paspalas CD, Shu Y, Simen A, Duque A, Vijayraghavan S, Brennan A, Dudley A, Nou E, Mazer JA, McCormick DA, Arnsten AF (2007) Alpha2A-adrenoceptors strengthen working memory networks by inhibiting cAMP-HCN channel signaling in prefrontal cortex. Cell 129:397-410 [Journal] [PubMed]
Williams SR, Stuart GJ (2000) Site independence of EPSP time course is mediated by dendritic I(h) in neocortical pyramidal neurons. J Neurophysiol 83:3177-82 [Journal] [PubMed]
Xu NL, Harnett MT, Williams SR, Huber D, O'Connor DH, Svoboda K, Magee JC (2012) Nonlinear dendritic integration of sensory and motor input during an active sensing task. Nature 492:247-51 [Journal] [PubMed]
Yuste R (2010) Dendritic Spines
Zhu JJ (2000) Maturation of layer 5 neocortical pyramidal neurons: amplifying salient layer 1 and layer 4 inputs by Ca2+ action potentials in adult rat tuft dendrites. J Physiol 526 Pt 3:571-87 [PubMed]
Aberra AS, Peterchev AV, Grill WM (2018) Biophysically realistic neuron models for simulation of cortical stimulation. J Neural Eng 15:066023 [Journal] [PubMed]
   Biophysically realistic neuron models for simulation of cortical stimulation (Aberra et al. 2018) [Model]
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