Citation Relationships

Legends: Link to a Model Reference cited by multiple papers


Mulcahy G, Atwood B, Kuznetsov A (2020) Basal ganglia role in learning rewarded actions and executing previously learned choices: Healthy and diseased states. PLoS One 15:e0228081 [PubMed]

   Cortico - Basal Ganglia Loop (Mulcahy et al 2020)

References and models cited by this paper

References and models that cite this paper

Alexander GE, Crutcher MD (1990) Functional architecture of basal ganglia circuits: neural substrates of parallel processing. Trends Neurosci 13:266-71 [PubMed]
An J, Yadav T, Hessburg JP, Francis JT (2019) Reward Expectation Modulates Local Field Potentials, Spiking Activity and Spike-Field Coherence in the Primary Motor Cortex. eNeuro [Journal] [PubMed]
Baladron J, Nambu A, Hamker FH (2019) The subthalamic nucleus-external globus pallidus loop biases exploratory decisions towards known alternatives: a neuro-computational study. Eur J Neurosci 49:754-767 [Journal] [PubMed]
Balleine BW, Liljeholm M, Ostlund SB (2009) The integrative function of the basal ganglia in instrumental conditioning. Behav Brain Res 199:43-52 [Journal] [PubMed]
Bamford NS, Wightman RM, Sulzer D (2018) Dopamine's Effects on Corticostriatal Synapses during Reward-Based Behaviors. Neuron 97:494-510 [Journal] [PubMed]
Bergman H, Wichmann T, Karmon B, DeLong MR (1994) The primate subthalamic nucleus. II. Neuronal activity in the MPTP model of parkinsonism. J Neurophysiol 72:507-20 [Journal] [PubMed]
Best J, Park C, Terman D, Wilson C (2007) Transitions between irregular and rhythmic firing patterns in excitatory-inhibitory neuronal networks. J Comput Neurosci 23:217-35 [Journal] [PubMed]
Bhatia KP, Marsden CD (1994) The behavioural and motor consequences of focal lesions of the basal ganglia in man. Brain 117 ( Pt 4):859-76 [Journal] [PubMed]
Brown P, Eusebio A (2008) Paradoxes of functional neurosurgery: clues from basal ganglia recordings. Mov Disord 23:12-20; quiz 158 [Journal] [PubMed]
Buonomano DV, Merzenich MM (1998) Cortical plasticity: from synapses to maps. Annu Rev Neurosci 21:149-86 [Journal] [PubMed]
Chakravarthy VS, Joseph D, Bapi RS (2010) What do the basal ganglia do? A modeling perspective. Biol Cybern 103:237-53 [Journal] [PubMed]
Cohen JD, McClure SM, Yu AJ (2007) Should I stay or should I go? How the human brain manages the trade-off between exploitation and exploration. Philos Trans R Soc Lond B Biol Sci 362:933-42 [Journal] [PubMed]
Cools R, Altamirano L, D'Esposito M (2006) Reversal learning in Parkinson's disease depends on medication status and outcome valence. Neuropsychologia 44:1663-73 [Journal] [PubMed]
Cooper AJ, Stanford IM (2001) Dopamine D2 receptor mediated presynaptic inhibition of striatopallidal GABA(A) IPSCs in vitro. Neuropharmacology 41:62-71 [PubMed]
Cozac VV, Gschwandtner U, Hatz F, Hardmeier M, Rüegg S, Fuhr P (2016) Quantitative EEG and Cognitive Decline in Parkinson's Disease. Parkinsons Dis 2016:9060649 [Journal] [PubMed]
Cui G, Jun SB, Jin X, Pham MD, Vogel SS, Lovinger DM, Costa RM (2013) Concurrent activation of striatal direct and indirect pathways during action initiation. Nature 494:238-42 [Journal] [PubMed]
Damodaran S, Evans RC, Blackwell KT (2014) Synchronized firing of fast-spiking interneurons is critical to maintain balanced firing between direct and indirect pathway neurons of the striatum. J Neurophysiol 111:836-48 [Journal] [PubMed]
   Synchronicity of fast-spiking interneurons balances medium-spiny neurons (Damodaran et al. 2014) [Model]
DeLong MR (1990) Primate models of movement disorders of basal ganglia origin. Trends Neurosci 13:281-5 [PubMed]
Dostrovsky JO, Hutchison WD, Lozano AM (2002) The globus pallidus, deep brain stimulation, and Parkinson's disease. Neuroscientist 8:284-90 [Journal] [PubMed]
Doudet DJ, Gross C, Arluison M, Bioulac B (1990) Modifications of precentral cortex discharge and EMG activity in monkeys with MPTP-induced lesions of DA nigral neurons. Exp Brain Res 80:177-88 [PubMed]
Dreyer JK, Herrik KF, Berg RW, Hounsgaard JD (2010) Influence of phasic and tonic dopamine release on receptor activation. J Neurosci 30:14273-83 [Journal] [PubMed]
Fisher SD, Robertson PB, Black MJ, Redgrave P, Sagar MA, Abraham WC, Reynolds JNJ (2017) Reinforcement determines the timing dependence of corticostriatal synaptic plasticity in vivo. Nat Commun 8:334 [Journal] [PubMed]
Floran B, Floran L, Erlij D, Aceves J (2004) Dopamine D4 receptors inhibit depolarization-induced [3H]GABA release in the rat subthalamic nucleus. Eur J Pharmacol 498:97-102 [Journal] [PubMed]
Foerde K, Shohamy D (2011) The role of the basal ganglia in learning and memory: insight from Parkinson's disease. Neurobiol Learn Mem 96:624-36 [Journal] [PubMed]
Frank MJ (2005) Dynamic dopamine modulation in the basal ganglia: a neurocomputational account of cognitive deficits in medicated and nonmedicated Parkinsonism. J Cogn Neurosci 17:51-72 [Journal] [PubMed]
   Dynamic dopamine modulation in the basal ganglia: Learning in Parkinson (Frank et al 2004,2005) [Model]
Galvan A, Devergnas A, Wichmann T (2015) Alterations in neuronal activity in basal ganglia-thalamocortical circuits in the parkinsonian state. Front Neuroanat 9:5 [Journal] [PubMed]
Gerfen CR (1992) The neostriatal mosaic: multiple levels of compartmental organization in the basal ganglia. Annu Rev Neurosci 15:285-320 [Journal] [PubMed]
Grahn JA, Parkinson JA, Owen AM (2009) The role of the basal ganglia in learning and memory: neuropsychological studies. Behav Brain Res 199:53-60 [Journal] [PubMed]
Graybiel AM (2008) Habits, rituals, and the evaluative brain. Annu Rev Neurosci 31:359-87 [Journal] [PubMed]
Graybiel AM, Grafton ST (2015) The striatum: where skills and habits meet. Cold Spring Harb Perspect Biol 7:a021691 [Journal] [PubMed]
Grillner S, Robertson B, Stephenson-Jones M (2013) The evolutionary origin of the vertebrate basal ganglia and its role in action selection. J Physiol 591:5425-31 [Journal] [PubMed]
Grospe GM, Baker PM, Ragozzino ME (2018) Cognitive Flexibility Deficits Following 6-OHDA Lesions of the Rat Dorsomedial Striatum. Neuroscience 374:80-90 [Journal] [PubMed]
Gurney K, Prescott TJ, Redgrave P (2001) A computational model of action selection in the basal ganglia. I. A new functional anatomy. Biol Cybern 84:401-10 [Journal] [PubMed]
   Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004) [Model]
Gurney KN, Humphries MD, Redgrave P (2015) A new framework for cortico-striatal plasticity: behavioural theory meets in vitro data at the reinforcement-action interface. PLoS Biol 13:e1002034 [Journal] [PubMed]
   Cortico-striatal plasticity in medium spiny neurons (Gurney et al 2015) [Model]
Gutierrez-Garralda JM, Moreno-Briseño P, Boll MC, Morgado-Valle C, Campos-Romo A, Diaz R, Fernandez-Ruiz J (2013) The effect of Parkinson's disease and Huntington's disease on human visuomotor learning. Eur J Neurosci 38:2933-40 [Journal] [PubMed]
Hassani OK, Mouroux M, Féger J (1996) Increased subthalamic neuronal activity after nigral dopaminergic lesion independent of disinhibition via the globus pallidus. Neuroscience 72:105-15 [PubMed]
Heindel WC, Butters N, Salmon DP (1988) Impaired learning of a motor skill in patients with Huntington's disease. Behav Neurosci 102:141-7 [Journal] [PubMed]
Hogarth L, Balleine BW, Corbit LH, Killcross S (2013) Associative learning mechanisms underpinning the transition from recreational drug use to addiction. Ann N Y Acad Sci 1282:12-24 [Journal] [PubMed]
Hopf FW, Lesscher HM (2014) Rodent models for compulsive alcohol intake. Alcohol 48:253-64 [Journal] [PubMed]
Hulse SH,Egeth H,Deese J (1980) The psychology of learning 5:478
Humphries MD, Lepora N, Wood R, Gurney K (2009) Capturing dopaminergic modulation and bimodal membrane behaviour of striatal medium spiny neurons in accurate, reduced models. Front Comput Neurosci 3:26 [Journal] [PubMed]
   Dopamine-modulated medium spiny neuron, reduced model (Humphries et al. 2009) [Model]
Humphries MD, Obeso JA, Dreyer JK (2018) Insights into Parkinson's disease from computational models of the basal ganglia. J Neurol Neurosurg Psychiatry 89:1181-1188 [Journal] [PubMed]
Humphries MD, Stewart RD, Gurney KN (2006) A physiologically plausible model of action selection and oscillatory activity in the basal ganglia. J Neurosci 26:12921-42 [Journal] [PubMed]
   Spiking neuron model of the basal ganglia (Humphries et al 2006) [Model]
Hutchison WD, Lozano AM, Davis KD, Saint-Cyr JA, Lang AE, Dostrovsky JO (1994) Differential neuronal activity in segments of globus pallidus in Parkinson's disease patients. Neuroreport 5:1533-7 [PubMed]
Izquierdo A, Wiedholz LM, Millstein RA, Yang RJ, Bussey TJ, Saksida LM, Holmes A (2006) Genetic and dopaminergic modulation of reversal learning in a touchscreen-based operant procedure for mice. Behav Brain Res 171:181-8 [Journal] [PubMed]
Kalia LV, Lang AE (2015) Parkinson's disease. Lancet 386:896-912 [Journal] [PubMed]
Keiflin R, Janak PH (2015) Dopamine Prediction Errors in Reward Learning and Addiction: From Theory to Neural Circuitry. Neuron 88:247-63 [Journal] [PubMed]
Kim T, Hamade KC, Todorov D, Barnett WH, Capps RA, Latash EM, Markin SN, Rybak IA, Molkov YI (2017) Reward Based Motor Adaptation Mediated by Basal Ganglia. Front Comput Neurosci 11:19 [Journal] [PubMed]
Kita H, Kita T (2011) Role of Striatum in the Pause and Burst Generation in the Globus Pallidus of 6-OHDA-Treated Rats. Front Syst Neurosci 5:42 [Journal] [PubMed]
Klaus A, Martins GJ, Paixao VB, Zhou P, Paninski L, Costa RM (2017) The Spatiotemporal Organization of the Striatum Encodes Action Space. Neuron 95:1171-1180.e7 [Journal] [PubMed]
Koch C,Segev I (2001) Methods in neuronal modeling: from ions to networks Computational neuroscience :671
Kreitzer AC, Malenka RC (2008) Striatal plasticity and basal ganglia circuit function. Neuron 60:543-54 [Journal] [PubMed]
Lanciego JL, Luquin N, Obeso JA (2012) Functional neuroanatomy of the basal ganglia. Cold Spring Harb Perspect Med 2:a009621 [Journal] [PubMed]
Lawrence AD, Hodges JR, Rosser AE, Kershaw A, ffrench-Constant C, Rubinsztein DC, Robbins TW, Sahakian BJ (1998) Evidence for specific cognitive deficits in preclinical Huntington's disease. Brain 121 ( Pt 7):1329-41 [Journal] [PubMed]
Leblois A, Boraud T, Meissner W, Bergman H, Hansel D (2006) Competition between feedback loops underlies normal and pathological dynamics in the basal ganglia. J Neurosci 26:3567-83 [Journal] [PubMed]
   A dynamical model of the basal ganglia (Leblois et al 2006) [Model]
Lindahl M, Hellgren Kotaleski J (2016) Untangling Basal Ganglia Network Dynamics and Function: Role of Dopamine Depletion and Inhibition Investigated in a Spiking Network Model. eNeuro [Journal] [PubMed]
Linden J, James AS, McDaniel C, Jentsch JD (2018) Dopamine D2 Receptors in Dopaminergic Neurons Modulate Performance in a Reversal Learning Task in Mice. eNeuro [Journal] [PubMed]
London TD, Licholai JA, Szczot I, Ali MA, LeBlanc KH, Fobbs WC, Kravitz AV (2018) Coordinated Ramping of Dorsal Striatal Pathways preceding Food Approach and Consumption. J Neurosci 38:3547-3558 [Journal] [PubMed]
Maia TV, Frank MJ (2011) From reinforcement learning models to psychiatric and neurological disorders. Nat Neurosci 14:154-62 [Journal] [PubMed]
Mallet N, Ballion B, Le Moine C, Gonon F (2006) Cortical inputs and GABA interneurons imbalance projection neurons in the striatum of parkinsonian rats. J Neurosci 26:3875-84 [Journal] [PubMed]
Marsden CD, Obeso JA (1994) The functions of the basal ganglia and the paradox of stereotaxic surgery in Parkinson's disease. Brain 117 ( Pt 4):877-97 [PubMed]
Marsh BT, Tarigoppula VS, Chen C, Francis JT (2015) Toward an autonomous brain machine interface: integrating sensorimotor reward modulation and reinforcement learning. J Neurosci 35:7374-87 [Journal] [PubMed]
Miller WC,DeLong MR,Carpenter MB,Jayaraman A (1987) Altered Tonic Activity of Neurons in the Globus Pallidus and Subthalamic Nucleus in the Primate MPTP Model of Parkinsonism The Basal Ganglia II, Carpenter MB, Jayaraman A, ed. pp.415 [Journal]
Moyer JT, Wolf JA, Finkel LH (2007) Effects of dopaminergic modulation on the integrative properties of the ventral striatal medium spiny neuron. J Neurophysiol 98:3731-48 [Journal] [PubMed]
Munhoz RP, Cerasa A, Okun MS (2014) Surgical treatment of dyskinesia in Parkinson's disease. Front Neurol 5:65 [Journal] [PubMed]
Nelson AB, Kreitzer AC (2014) Reassessing models of basal ganglia function and dysfunction. Annu Rev Neurosci 37:117-35 [Journal] [PubMed]
Neymotin SA, Chadderdon GL, Kerr CC, Francis JT, Lytton WW (2013) Reinforcement learning of two-joint virtual arm reaching in a computer model of sensorimotor cortex. Neural Comput 25:3263-93 [Journal] [PubMed]
   Sensorimotor cortex reinforcement learning of 2-joint virtual arm reaching (Neymotin et al. 2013) [Model]
Ogura M, Kita H (2000) Dynorphin exerts both postsynaptic and presynaptic effects in the Globus pallidus of the rat. J Neurophysiol 83:3366-76 [Journal] [PubMed]
Packard MG, Knowlton BJ (2002) Learning and memory functions of the Basal Ganglia. Annu Rev Neurosci 25:563-93 [Journal] [PubMed]
Pan HS, Walters JR (1988) Unilateral lesion of the nigrostriatal pathway decreases the firing rate and alters the firing pattern of globus pallidus neurons in the rat. Synapse 2:650-6 [Journal] [PubMed]
Park C, Worth RM, Rubchinsky LL (2011) Neural dynamics in parkinsonian brain: the boundary between synchronized and nonsynchronized dynamics. Phys Rev E Stat Nonlin Soft Matter Phys 83:042901 [Journal] [PubMed]
Pavlides A, Hogan SJ, Bogacz R (2015) Computational Models Describing Possible Mechanisms for Generation of Excessive Beta Oscillations in Parkinson's Disease. PLoS Comput Biol 11:e1004609 [Journal] [PubMed]
   Excessive beta oscillations in Parkinson's disease (Pavlides et al. 2015) [Model]
Peterson DA, Elliott C, Song DD, Makeig S, Sejnowski TJ, Poizner H (2009) Probabilistic reversal learning is impaired in Parkinson's disease. Neuroscience 163:1092-101 [Journal] [PubMed]
Piron C, Kase D, Topalidou M, Goillandeau M, Orignac H, N'Guyen TH, Rougier N, Boraud T (2016) The globus pallidus pars interna in goal-oriented and routine behaviors: Resolving a long-standing paradox. Mov Disord 31:1146-54 [Journal] [PubMed]
Prescott TJ,Bryson JJ,Seth AK,Introduction (29) Modelling natural action selection Philos Trans R Soc B Biol Sci 2007 Sep 362(1485):1521-1529
Redgrave P, Rodriguez M, Smith Y, Rodriguez-Oroz MC, Lehericy S, Bergman H, Agid Y, DeLong MR, Obeso JA (2010) Goal-directed and habitual control in the basal ganglia: implications for Parkinson's disease. Nat Rev Neurosci 11:760-72 [Journal] [PubMed]
Reed MC,Best J,Nijhout HF () Passive and active stabilization of dopamine in the striatum Biosci Hypotheses 2009 Jan 2:240-4
Reiner A, Dragatsis I, Dietrich P (2011) Genetics and neuropathology of Huntington's disease. Int Rev Neurobiol 98:325-72 [Journal] [PubMed]
Reynolds JN, Hyland BI, Wickens JR (2001) A cellular mechanism of reward-related learning. Nature 413:67-70 [Journal] [PubMed]
Rikhye RV, Wimmer RD, Halassa MM (2018) Toward an Integrative Theory of Thalamic Function. Annu Rev Neurosci 41:163-183 [Journal] [PubMed]
Rommelfanger KS (2010) Extrastriatal dopaminergic circuits of the basal ganglia Front Neuroanat [Journal]
Rubin JE (2017) Computational models of basal ganglia dysfunction: the dynamics is in the details. Curr Opin Neurobiol 46:127-135 [Journal] [PubMed]
Schapira AH (2009) Neurobiology and treatment of Parkinson's disease. Trends Pharmacol Sci 30:41-7 [Journal] [PubMed]
Schroll H, Beste C, Hamker FH (2015) Combined lesions of direct and indirect basal ganglia pathways but not changes in dopamine levels explain learning deficits in patients with Huntington's disease. Eur J Neurosci 41:1227-44 [Journal] [PubMed]
Schroll H, Hamker FH (2016) Basal Ganglia dysfunctions in movement disorders: What can be learned from computational simulations. Mov Disord 31:1591-1601 [Journal] [PubMed]
Schroll H, Vitay J, Hamker FH (2014) Dysfunctional and compensatory synaptic plasticity in Parkinson's disease. Eur J Neurosci 39:688-702 [Journal] [PubMed]
Schultz W (2007) Behavioral dopamine signals. Trends Neurosci 30:203-10 [Journal] [PubMed]
Schultz W (2013) Updating dopamine reward signals. Curr Opin Neurobiol 23:229-38 [Journal] [PubMed]
Sharp AH, Ross CA (1996) Neurobiology of Huntington's disease. Neurobiol Dis 3:3-15 [Journal] [PubMed]
Shen KZ, Johnson SW (2000) Presynaptic dopamine D2 and muscarine M3 receptors inhibit excitatory and inhibitory transmission to rat subthalamic neurones in vitro. J Physiol 525 Pt 2:331-41 [PubMed]
Shen KZ, Zhu ZT, Munhall A, Johnson SW (2003) Dopamine receptor supersensitivity in rat subthalamus after 6-hydroxydopamine lesions. Eur J Neurosci 18:2967-74 [Journal] [PubMed]
Shindou T, Shindou M, Watanabe S, Wickens J (2019) A silent eligibility trace enables dopamine-dependent synaptic plasticity for reinforcement learning in the mouse striatum. Eur J Neurosci 49:726-736 [Journal] [PubMed]
Soikkeli R, Partanen J, Soininen H, Pääkkönen A, Riekkinen P (1991) Slowing of EEG in Parkinson's disease. Electroencephalogr Clin Neurophysiol 79:159-65 [PubMed]
Stanford IM, Cooper AJ (1999) Presynaptic mu and delta opioid receptor modulation of GABAA IPSCs in the rat globus pallidus in vitro. J Neurosci 19:4796-803 [PubMed]
Sterio D, Beric A, Dogali M, Fazzini E, Alfaro G, Devinsky O (1994) Neurophysiological properties of pallidal neurons in Parkinson's disease. Ann Neurol 35:586-91 [Journal] [PubMed]
Surmeier DJ, Plotkin J, Shen W (2009) Dopamine and synaptic plasticity in dorsal striatal circuits controlling action selection. Curr Opin Neurobiol 19:621-8 [Journal] [PubMed]
Surmeier DJ, Song WJ, Yan Z (1996) Coordinated expression of dopamine receptors in neostriatal medium spiny neurons. J Neurosci 16:6579-91 [PubMed]
Takahashi Y, Schoenbaum G, Niv Y (2008) Silencing the critics: understanding the effects of cocaine sensitization on dorsolateral and ventral striatum in the context of an actor/critic model. Front Neurosci 2:86-99 [Journal] [PubMed]
Topalidou M, Kase D, Boraud T, Rougier NP (2018) A Computational Model of Dual Competition between the Basal Ganglia and the Cortex. eNeuro [Journal] [PubMed]
Turrigiano GG, Nelson SB (2004) Homeostatic plasticity in the developing nervous system. Nat Rev Neurosci 5:97-107 [Journal] [PubMed]
van Albada SJ, Gray RT, Drysdale PM, Robinson PA (2009) Mean-field modeling of the basal ganglia-thalamocortical system. II Dynamics of parkinsonian oscillations. J Theor Biol 257:664-88 [Journal] [PubMed]
Wei W, Rubin JE, Wang XJ (2015) Role of the indirect pathway of the basal ganglia in perceptual decision making. J Neurosci 35:4052-64 [Journal] [PubMed]
Wichmann T, Bergman H, Starr PA, Subramanian T, Watts RL, DeLong MR (1999) Comparison of MPTP-induced changes in spontaneous neuronal discharge in the internal pallidal segment and in the substantia nigra pars reticulata in primates. Exp Brain Res 125:397-409 [PubMed]
Wojtecki L, Groiss SJ, Hartmann CJ, Elben S, Omlor S, Schnitzler A, Vesper J (2016) Deep Brain Stimulation in Huntington's Disease-Preliminary Evidence on Pathophysiology, Efficacy and Safety. Brain Sci [Journal] [PubMed]
Wolters A, Sandbrink F, Schlottmann A, Kunesch E, Stefan K, Cohen LG, Benecke R, Classen J (2003) A temporally asymmetric Hebbian rule governing plasticity in the human motor cortex. J Neurophysiol 89:2339-45 [Journal] [PubMed]
Yin HH, Knowlton BJ, Balleine BW (2004) Lesions of dorsolateral striatum preserve outcome expectancy but disrupt habit formation in instrumental learning. Eur J Neurosci 19:181-9 [PubMed]
(107 refs)