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Günay C, Doloc-Mihu A, Lamb DG, Calabrese RL (2019) Synaptic Strengths Dominate Phasing of Motor Circuit: Intrinsic Conductances of Neuron Types Need Not Vary across Animals. eNeuro [PubMed]

   Synaptic strengths are critical in creating the proper output phasing in a CPG (Gunay et al 2019)

References and models cited by this paper

References and models that cite this paper

Anwar H,Storms J,Nadim F (2015) Synaptic inputs are tuned to match intrinsic properties to maintain phase in oscillatory neural networks. BMC Neuroscience [Journal]
Bucher D, Prinz AA, Marder E (2005) Animal-to-animal variability in motor pattern production in adults and during growth. J Neurosci 25:1611-9 [Journal] [PubMed]
Doloc-Mihu A, Calabrese RL (2011) A database of computational models of a half-center oscillator for analyzing how neuronal parameters influence network activity. J Biol Phys 37:263-83 [Journal] [PubMed]
   Half-center oscillator database of leech heart interneuron model (Doloc-Mihu & Calabrese 2011) [Model]
Doloc-Mihu A, Calabrese RL (2016) Analysis of Family Structures Reveals Robustness or Sensitivity of Bursting Activity to Parameter Variations in a Half-Center Oscillator (HCO) Model. eNeuro [Journal] [PubMed]
Druckmann S (2013) Automated parameter constraining of single-neuron models. The computing dendrite [Journal]
Druckmann S, Banitt Y, Gidon A, Schürmann F, Markram H, Segev I (2007) A novel multiple objective optimization framework for constraining conductance-based neuron models by experimental data. Front Neurosci 1:7-18 [Journal] [PubMed]
Falcone JD, Carroll SL, Saxena T, Mandavia D, Clark A, Yarabarla V, Bellamkonda RV (2018) Correlation of mRNA Expression and Signal Variability in Chronic Intracortical Electrodes. Front Bioeng Biotechnol 6:26 [Journal] [PubMed]
García PS, Wright TM, Cunningham IR, Calabrese RL (2008) Using a model to assess the role of the spatiotemporal pattern of inhibitory input and intrasegmental electrical coupling in the intersegmental and side-to-side coordination of motor neurons by the leech heartbeat central pattern generator. J Neurophysiol 100:1354-71 [Journal] [PubMed]
Goaillard JM, Taylor AL, Schulz DJ, Marder E (2009) Functional consequences of animal-to-animal variation in circuit parameters. Nat Neurosci 12:1424-30 [Journal] [PubMed]
Golowasch J, Abbott LF, Marder E (1999) Activity-dependent regulation of potassium currents in an identified neuron of the stomatogastric ganglion of the crab Cancer borealis. J Neurosci 19:RC33 [PubMed]
Golowasch J, Casey M, Abbott LF, Marder E (1999) Network stability from activity-dependent regulation of neuronal conductances. Neural Comput 11:1079-96 [PubMed]
Golowasch J, Goldman MS, Abbott LF, Marder E (2002) Failure of averaging in the construction of a conductance-based neuron model. J Neurophysiol 87:1129-31 [Journal] [PubMed]
Grillner S (1974) On the generation of locomotion in the spinal dogfish. Exp Brain Res 20:459-70 [PubMed]
Günay C (2015) Neuronal model databases. Encyclopedia of computational neuroscienc,  Jaeger D, Jung R, ed. pp.1
Günay C, Edgerton JR, Li S, Sangrey T, Prinz AA, Jaeger D (2009) Database analysis of simulated and recorded electrophysiological datasets with PANDORA's toolbox. Neuroinformatics 7:93-111 [Journal] [PubMed]
Hamood AW, Haddad SA, Otopalik AG, Rosenbaum P, Marder E (2015) QUANTITATIVE REEVALUATION OF THE EFFECTS OF SHORT- AND LONG-TERM REMOVAL OF DESCENDING MODULATORY INPUTS ON THE PYLORIC RHYTHM OF THE CRAB, CANCER BOREALIS. eNeuro [Journal] [PubMed]
Hamood AW, Marder E (2014) Animal-to-Animal Variability in Neuromodulation and Circuit Function. Cold Spring Harb Symp Quant Biol 79:21-8 [Journal] [PubMed]
Hooper SL (1997) Phase maintenance in the pyloric pattern of the lobster (Panulirus interruptus) stomatogastric ganglion. J Comput Neurosci 4:191-205 [PubMed]
Hudson AE, Prinz AA (2010) Conductance ratios and cellular identity. PLoS Comput Biol 6:e1000838 [Journal] [PubMed]
Ito J (2015) Spike triggered average. Encyclopedia of computational neuroscience, Jaeger D, Jung R, ed.
Kushinsky D, Morozova EO, Marder E (2019) In vivo effects of temperature on the heart and pyloric rhythms in the crab Cancer borealis. J Exp Biol [Journal] [PubMed]
Lamb DG, Calabrese RL (2013) Correlated conductance parameters in leech heart motor neurons contribute to motor pattern formation. PLoS One 8:e79267 [Journal] [PubMed]
   Leech Heart (HE) Motor Neuron conductances contributions to NN activity (Lamb & Calabrese 2013) [Model]
Lane BJ, Samarth P, Ransdell JL, Nair SS, Schulz DJ (2016) Synergistic plasticity of intrinsic conductance and electrical coupling restores synchrony in an intact motor network. Elife [Journal] [PubMed]
Liang C, Li Y, Luo J (2016) A Novel Method to Detect Functional microRNA Regulatory Modules by Bicliques Merging. IEEE/ACM Trans Comput Biol Bioinform 13:549-56 [Journal] [PubMed]
Marder E, Calabrese RL (1996) Principles of rhythmic motor pattern generation. Physiol Rev 76:687-717 [Journal] [PubMed]
Marder E, Goaillard JM (2006) Variability, compensation and homeostasis in neuron and network function. Nat Rev Neurosci 7:563-74 [Journal] [PubMed]
Marder E, Goeritz ML, Otopalik AG (2015) Robust circuit rhythms in small circuits arise from variable circuit components and mechanisms. Curr Opin Neurobiol 31:156-63 [Journal] [PubMed]
Markram H, Muller E, Ramaswamy S, Reimann MW, Abdellah M, Sanchez CA, Ailamaki A, Alonso-Nanclares L, Antille N, Arsever S, Kahou GA, Berger TK, Bilgili A, Buncic N, Chalimourda A, Chindemi G, Courcol JD, Delalondre F, Delattre V, Druckmann S, Dumusc R, Dynes J, Eilemann S, Gal E, Gevaert ME, Ghobril JP, Gidon A, Graham JW, Gupta A, Haenel V, Hay E, Heinis T, Hernando JB, Hines M, Kanari L, Keller D, Kenyon J, Khazen G, Kim Y, King JG, Kisvarday Z, Kumbhar P, Lasserre S, Le Bé JV, Magalhães BR, Merchán-Pérez A, Meystre J, Morrice BR, Muller J, Muñoz-Céspedes A, Muralidhar S, Muthurasa K, Nachbaur D, Newton TH, Nolte M, Ovcharenko A, Palacios J, Pastor L, Perin R, Ranjan R, Riachi I, Rodríguez JR, Riquelme JL, Rössert C, Sfyrakis K, Shi Y, Shillcock JC, Silberberg G, Silva R, Tauheed F, Telefont M, Toledo-Rodriguez M, Tränkler T, Van Geit W, Díaz JV, Walker R, Wang Y, Zaninetta SM (2015) Reconstruction and Simulation of Neocortical Microcircuitry. Cell 163:456-92 [Journal] [PubMed]
   The neocortical microcircuit collaboration portal (Markram et al. 2015) [Model]
Norris BJ, Weaver AL, Morris LG, Wenning A, García PA, Calabrese RL (2006) A central pattern generator producing alternative outputs: temporal pattern of premotor activity. J Neurophysiol 96:309-26 [Journal] [PubMed]
Norris BJ, Weaver AL, Wenning A, García PS, Calabrese RL (2007) A central pattern generator producing alternative outputs: pattern, strength, and dynamics of premotor synaptic input to leech heart motor neurons. J Neurophysiol 98:2992-3005 [Journal] [PubMed]
Norris BJ, Weaver AL, Wenning A, García PS, Calabrese RL (2007) A central pattern generator producing alternative outputs: phase relations of leech heart motor neurons with respect to premotor synaptic input. J Neurophysiol 98:2983-91 [Journal] [PubMed]
Norris BJ, Wenning A, Wright TM, Calabrese RL (2011) Constancy and variability in the output of a central pattern generator. J Neurosci 31:4663-74 [Journal] [PubMed]
Otopalik AG, Sutton AC, Banghart M, Marder E (2017) When complex neuronal structures may not matter. Elife [Journal] [PubMed]
Prinz AA (2010) Computational approaches to neuronal network analysis. Philos Trans R Soc Lond B Biol Sci 365:2397-405 [Journal] [PubMed]
Ransdell JL, Nair SS, Schulz DJ (2013) Neurons within the same network independently achieve conserved output by differentially balancing variable conductance magnitudes. J Neurosci 33:9950-6 [Journal] [PubMed]
Schulz DJ, Goaillard JM, Marder E (2006) Variable channel expression in identified single and electrically coupled neurons in different animals. Nat Neurosci 9:356-62 [Journal] [PubMed]
Schulz DJ, Goaillard JM, Marder EE (2007) Quantitative expression profiling of identified neurons reveals cell-specific constraints on highly variable levels of gene expression. Proc Natl Acad Sci U S A 104:13187-91 [Journal] [PubMed]
Smarandache C, Hall WM, Mulloney B (2009) Coordination of rhythmic motor activity by gradients of synaptic strength in a neural circuit that couples modular neural oscillators. J Neurosci 29:9351-60 [Journal] [PubMed]
Smolinski TG,Prinz AA,Zurada JM (2007) Hybridization of rough sets and multi-objective evolutionary algorithms for classificatory signal decomposition Rough computing: theories, technologies, and applications, Hassanien AE, Suraj Z, Slezak D, Lingras P , ed. pp.204
Swensen AM, Bean BP (2005) Robustness of burst firing in dissociated purkinje neurons with acute or long-term reductions in sodium conductance. J Neurosci 25:3509-20 [Journal] [PubMed]
Wenning A, Cymbalyuk GS, Calabrese RL (2004) Heartbeat control in leeches. I. Constriction pattern and neural modulation of blood pressure in intact animals. J Neurophysiol 91:382-96 [Journal] [PubMed]
Wenning A, Hill AA, Calabrese RL (2004) Heartbeat control in leeches. II. Fictive motor pattern. J Neurophysiol 91:397-409 [Journal] [PubMed]
Wenning A, Norris BJ, Günay C, Kueh D, Calabrese RL (2018) Output variability across animals and levels in a motor system. Elife [Journal] [PubMed]
Williams AH, Kwiatkowski MA, Mortimer AL, Marder E, Zeeman ML, Dickinson PS (2013) Animal-to-animal variability in the phasing of the crustacean cardiac motor pattern: an experimental and computational analysis. J Neurophysiol 109:2451-65 [Journal] [PubMed]
Wright TM, Calabrese RL (2011) Contribution of motoneuron intrinsic properties to fictive motor pattern generation. J Neurophysiol 106:538-53 [Journal] [PubMed]
Wright TM, Calabrese RL (2011) Patterns of presynaptic activity and synaptic strength interact to produce motor output. J Neurosci 31:17555-71 [Journal] [PubMed]
Zou X, Chen Y, Liu M, Kang L (2008) A new evolutionary algorithm for solving many-objective optimization problems. IEEE Trans Syst Man Cybern B Cybern 38:1402-12 [Journal] [PubMed]
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