Ariav G, Polsky A, Schiller J (2003) Submillisecond precision of the input-output transformation function mediated by fast sodium dendritic spikes in basal dendrites of CA1 pyramidal neurons. J Neurosci 23:7750-8 [PubMed]

Azouz R, Gray CM (2000) Dynamic spike threshold reveals a mechanism for synaptic coincidence detection in cortical neurons in vivo. Proc Natl Acad Sci U S A 97:8110-5 [Journal] [PubMed]

Bekkers JM (2000) Distribution and activation of voltage-gated potassium channels in cell-attached and outside-out patches from large layer 5 cortical pyramidal neurons of the rat. J Physiol 525 Pt 3:611-20 [PubMed]

Bernard C, Johnston D (2003) Distance-dependent modifiable threshold for action potential back-propagation in hippocampal dendrites. J Neurophysiol 90:1807-16 [Journal] [PubMed]

Cash S, Yuste R (1999) Linear summation of excitatory inputs by CA1 pyramidal neurons. Neuron 22:383-94 [PubMed]

Chen WR, Midtgaard J, Shepherd GM (1997) Forward and backward propagation of dendritic impulses and their synaptic control in mitral cells. Science 278:463-7 [PubMed]

Colbert CM, Johnston D (1996) Axonal action-potential initiation and Na+ channel densities in the soma and axon initial segment of subicular pyramidal neurons. J Neurosci 16:6676-86 [PubMed]

Colbert CM, Johnston D (1998) Protein kinase C activation decreases activity-dependent attenuation of dendritic Na+ current in hippocampal CA1 pyramidal neurons. J Neurophysiol 79:491-5 [Journal] [PubMed]

Colbert CM, Pan E (2002) Ion channel properties underlying axonal action potential initiation in pyramidal neurons. Nat Neurosci 5:533-8 [Journal] [PubMed]

Cook EP, Johnston D (1999) Voltage-dependent properties of dendrites that eliminate location-dependent variability of synaptic input. J Neurophysiol 81:535-43 [Journal] [PubMed]

CRAGG BG, HAMLYN LH (1955) Action potentials of the pyramidal neurones in the hippocampus of the rabbit. J Physiol 129:608-27 [PubMed]

Csicsvari J, Hirase H, Czurkó A, Mamiya A, Buzsáki G (1999) Oscillatory coupling of hippocampal pyramidal cells and interneurons in the behaving Rat. J Neurosci 19:274-87 [PubMed]

Destexhe A, Mainen Z, Sejnowski TJ (1994) An efficient method for computing synaptic conductances based on a kinetic model of receptor binding Neural Comput 6:14-18 [Journal]

•	Efficient Method for Computing Synaptic Conductance (Destexhe et al 1994) [Model]
•	Kinetic synaptic models applicable to building networks (Destexhe et al 1998) [Model]
•	Application of a common kinetic formalism for synaptic models (Destexhe et al 1994) [Model]

Destexhe A, Rudolph M, Fellous JM, Sejnowski TJ (2001) Fluctuating synaptic conductances recreate in vivo-like activity in neocortical neurons. Neuroscience 107:13-24 [PubMed]

•	Fluctuating synaptic conductances recreate in-vivo-like activity (Destexhe et al 2001) [Model]
•	Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018) [Model]

Eccles JC (1964) Presynaptic inhibition The Physiology of synapses :220-238

Fisher RS, Pedley TA, Moody WJ, Prince DA (1976) The role of extracellular potassium in hippocampal epilepsy. Arch Neurol 33:76-83 [PubMed]

Frick A, Magee J, Johnston D (2004) LTP is accompanied by an enhanced local excitability of pyramidal neuron dendrites. Nat Neurosci 7:126-35 [Journal] [PubMed]

Gasparini S, Magee JC (2002) Phosphorylation-dependent differences in the activation properties of distal and proximal dendritic Na+ channels in rat CA1 hippocampal neurons. J Physiol 541:665-72 [PubMed]

Golding NL, Spruston N (1998) Dendritic sodium spikes are variable triggers of axonal action potentials in hippocampal CA1 pyramidal neurons. Neuron 21:1189-200 [PubMed]

Golding NL, Staff NP, Spruston N (2002) Dendritic spikes as a mechanism for cooperative long-term potentiation. Nature 418:326-31 [Journal] [PubMed]

Harsch A, Robinson HP (2000) Postsynaptic variability of firing in rat cortical neurons: the roles of input synchronization and synaptic NMDA receptor conductance. J Neurosci 20:6181-92 [PubMed]

Häusser M, Spruston N, Stuart GJ (2000) Diversity and dynamics of dendritic signaling. Science 290:739-44 [PubMed]

Hille B (2001) Classic mechanisms of block Ion Channels of Excitable Membranes (3rd edn) :503-537

Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed]

Hoffman DA, Johnston D (1998) Downregulation of transient K+ channels in dendrites of hippocampal CA1 pyramidal neurons by activation of PKA and PKC. J Neurosci 18:3521-8 [PubMed]

Hoffman DA, Magee JC, Colbert CM, Johnston D (1997) K+ channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature 387:869-75 [Journal] [PubMed]

Jones HC, Keep RF (1988) Brain fluid calcium concentration and response to acute hypercalcaemia during development in the rat. J Physiol 402:579-93 [PubMed]

Kamondi A, Acsády L, Buzsáki G (1998) Dendritic spikes are enhanced by cooperative network activity in the intact hippocampus. J Neurosci 18:3919-28 [PubMed]

KANDEL ER, SPENCER WA, BRINLEY FJ (1961) Electrophysiology of hippocampal neurons. I. Sequential invasion and synaptic organization. J Neurophysiol 24:225-42 [Journal] [PubMed]

Kudrimoti HS, Barnes CA, McNaughton BL (1999) Reactivation of hippocampal cell assemblies: effects of behavioral state, experience, and EEG dynamics. J Neurosci 19:4090-101 [PubMed]

Larkum ME, Zhu JJ, Sakmann B (2001) Dendritic mechanisms underlying the coupling of the dendritic with the axonal action potential initiation zone of adult rat layer 5 pyramidal neurons. J Physiol 533:447-66 [PubMed]

Lasser-Ross N, Miyakawa H, Lev-Ram V, Young SR, Ross WN (1991) High time resolution fluorescence imaging with a CCD camera. J Neurosci Methods 36:253-61 [PubMed]

Lisman JE (1999) Relating hippocampal circuitry to function: recall of memory sequences by reciprocal dentate-CA3 interactions. Neuron 22:233-42 [PubMed]

Magee JC (1998) Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. J Neurosci 18:7613-24 [PubMed]

Magee JC (1999) Dendritic lh normalizes temporal summation in hippocampal CA1 neurons. Nat Neurosci 2:508-14 [Journal] [PubMed]

Magee JC, Carruth M (1999) Dendritic voltage-gated ion channels regulate the action potential firing mode of hippocampal CA1 pyramidal neurons. J Neurophysiol 82:1895-901 [Journal] [PubMed]

Magee JC, Cook EP (2000) Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nat Neurosci 3:895-903 [Journal] [PubMed]

•	CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]

Magee JC, Johnston D (1997) A synaptically controlled, associative signal for Hebbian plasticity in hippocampal neurons. Science 275:209-13 [PubMed]

Martina M, Vida I, Jonas P (2000) Distal initiation and active propagation of action potentials in interneuron dendrites. Science 287:295-300 [PubMed]

Mcdermott CM, Bazan NG, Magee JC (2003) Effects of sleep deprivation on glutamatergic transmission in hippocampal neurons Soc Neurosci Abstr 29:903

McHugh TJ, Blum KI, Tsien JZ, Tonegawa S, Wilson MA (1996) Impaired hippocampal representation of space in CA1-specific NMDAR1 knockout mice. Cell 87:1339-49 [PubMed]

Migliore M, Messineo L, Ferrante M (2004) Dendritic Ih selectively blocks temporal summation of unsynchronized distal inputs in CA1 pyramidal neurons. J Comput Neurosci 16:5-13 [PubMed]

•	CA1 pyramidal neuron: effects of Ih on distal inputs (Migliore et al 2004) [Model]

Otmakhova NA, Otmakhov N, Lisman JE (2002) Pathway-specific properties of AMPA and NMDA-mediated transmission in CA1 hippocampal pyramidal cells. J Neurosci 22:1199-207 [PubMed]

Poirazi P, Brannon T, Mel BW (2003) Pyramidal neuron as two-layer neural network. Neuron 37:989-99 [PubMed]

•	CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poirazi P, Mel BW (2001) Impact of active dendrites and structural plasticity on the memory capacity of neural tissue. Neuron 29:779-96 [PubMed]

Polsky A, Mel BW, Schiller J (2004) Computational subunits in thin dendrites of pyramidal cells. Nat Neurosci 7:621-7 [Journal] [PubMed]

•	CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003) [Model]

Poolos NP, Mauk MD, Kocsis JD (1987) Activity-evoked increases in extracellular potassium modulate presynaptic excitability in the CA1 region of the hippocampus. J Neurophysiol 58:404-16 [Journal] [PubMed]

Qin YL, McNaughton BL, Skaggs WE, Barnes CA (1997) Memory reprocessing in corticocortical and hippocampocortical neuronal ensembles. Philos Trans R Soc Lond B Biol Sci 352:1525-33 [Journal] [PubMed]

Schiller J, Major G, Koester HJ, Schiller Y (2000) NMDA spikes in basal dendrites of cortical pyramidal neurons. Nature 404:285-9 [Journal] [PubMed]

Schiller J, Schiller Y, Stuart G, Sakmann B (1997) Calcium action potentials restricted to distal apical dendrites of rat neocortical pyramidal neurons. J Physiol 505 ( Pt 3):605-16 [PubMed]

Smith MA, Ellis-Davies GC, Magee JC (2003) Mechanism of the distance-dependent scaling of Schaffer collateral synapses in rat CA1 pyramidal neurons. J Physiol 548:245-58 [Journal] [PubMed]

Spencer WA, Kandel ER (1961) ELECTROPHYSIOLOGY OF HIPPOCAMPAL NEURONS: IV. FAST PREPOTENTIALS. J Neurophysiol 24:272-85 [Journal] [PubMed]

Turner RW, Meyers DE, Richardson TL, Barker JL (1991) The site for initiation of action potential discharge over the somatodendritic axis of rat hippocampal CA1 pyramidal neurons. J Neurosci 11:2270-80 [PubMed]

Wei DS, Mei YA, Bagal A, Kao JP, Thompson SM, Tang CM (2001) Compartmentalized and binary behavior of terminal dendrites in hippocampal pyramidal neurons. Science 293:2272-5 [Journal] [PubMed]

Williams SR, Stuart GJ (2002) Dependence of EPSP efficacy on synapse location in neocortical pyramidal neurons. Science 295:1907-10 [Journal] [PubMed]

Wilson MA, McNaughton BL (1994) Reactivation of hippocampal ensemble memories during sleep. Science 265:676-9 [PubMed]

Acker CD, White JA (2007) Roles of IA and morphology in action potential propagation in CA1 pyramidal cell dendrites. J Comput Neurosci 23:201-16 [Journal] [PubMed]

•	Roles of I(A) and morphology in AP prop. in CA1 pyramidal cell dendrites (Acker and White 2007) [Model]

Alturki A, Feng F, Nair A, Guntu V, Nair SS (2016) Distinct current modules shape cellular dynamics in model neurons. Neuroscience 334:309-331 [Journal] [PubMed]

•	Distinct current modules shape cellular dynamics in model neurons (Alturki et al 2016) [Model]

Azouz R, Gray CM (2008) Stimulus-selective spiking is driven by the relative timing of synchronous excitation and disinhibition in cat striate neurons in vivo. Eur J Neurosci 28:1286-300 [Journal] [PubMed]

Basak R, Narayanan R (2018) Active dendrites regulate the spatiotemporal spread of signaling microdomains. PLoS Comput Biol 14:e1006485 [Journal] [PubMed]

•	Active dendrites shape signaling microdomains in hippocampal neurons (Basak & Narayanan 2018) [Model]

Booth V, Poe GR (2006) Input source and strength influences overall firing phase of model hippocampal CA1 pyramidal cells during theta: relevance to REM sleep reactivation and memory consolidation. Hippocampus 16:161-73 [Journal] [PubMed]

Cannon RC, O'Donnell C, Nolan MF (2010) Stochastic ion channel gating in dendritic neurons: morphology dependence and probabilistic synaptic activation of dendritic spikes. PLoS Comput Biol [Journal] [PubMed]

•	Stochastic ion channels and neuronal morphology (Cannon et al. 2010) [Model]

Carnevale NT, Morse TM (1996-2009) Research reports that have used NEURON Web published citations at the NEURON website [Journal]

Cassarà AM, Hagberg GE, Bianciardi M, Migliore M, Maraviglia B (2008) Realistic simulations of neuronal activity: a contribution to the debate on direct detection of neuronal currents by MRI. Neuroimage 39:87-106 [Journal] [PubMed]

•	CA1 pyramidal neuron: calculation of MRI signals (Cassara et al. 2008) [Model]

Cavarretta F, Carnevale NT, Tegolo D, Migliore M (2014) Effects of low frequency electric fields on synaptic integration in hippocampal CA1 pyramidal neurons: implications for power line emissions. Front Cell Neurosci 8:310 [Journal] [PubMed]

•	CA1 pyramidal neurons: effect of external electric field from power lines (Cavarretta et al. 2014) [Model]

Culmone V, Migliore M (2012) Progressive effect of beta amyloid peptides accumulation on CA1 pyramidal neurons: a model study suggesting possible treatments. Front Comput Neurosci 6:52 [Journal] [PubMed]

•	CA1 pyramidal neurons: effects of Alzheimer (Culmone and Migliore 2012) [Model]

Das A, Narayanan R (2015) Active dendrites mediate stratified gamma-range coincidence detection in hippocampal model neurons. J Physiol 593:3549-76 [Journal] [PubMed]

Edgerton JR, Hanson JE, Günay C, Jaeger D (2010) Dendritic sodium channels regulate network integration in globus pallidus neurons: a modeling study. J Neurosci 30:15146-59 [Journal] [PubMed]

•	Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010) [Model]

Ferrante M, Migliore M, Ascoli GA (2013) Functional impact of dendritic branch-point morphology. J Neurosci 33:2156-65 [Journal] [PubMed]

•	Functional impact of dendritic branch point morphology (Ferrante et al., 2013) [Model]

Jarsky T, Roxin A, Kath WL, Spruston N (2005) Conditional dendritic spike propagation following distal synaptic activation of hippocampal CA1 pyramidal neurons. Nat Neurosci 8:1667-76 [Journal] [PubMed]

•	CA1 pyramidal neuron synaptic integration (Jarsky et al. 2005) [Model]

Katz Y, Menon V, Nicholson DA, Geinisman Y, Kath WL, Spruston N (2009) Synapse distribution suggests a two-stage model of dendritic integration in CA1 pyramidal neurons. Neuron 63:171-7 [Journal] [PubMed]

•	A two-stage model of dendritic integration in CA1 pyramidal neurons (Katz et al. 2009) [Model]

Komendantov AO, Ascoli GA (2009) Dendritic excitability and neuronal morphology as determinants of synaptic efficacy. J Neurophysiol 101:1847-66 [Journal] [PubMed]

Kuo JJ, Lee RH, Zhang L, Heckman CJ (2006) Essential role of the persistent sodium current in spike initiation during slowly rising inputs in mouse spinal neurones. J Physiol 574:819-34 [Journal] [PubMed]

Lewin N, Aksay E, Clancy CE (2012) Computational modeling reveals dendritic origins of GABA(A)-mediated excitation in CA1 pyramidal neurons. PLoS One 7:e47250 [Journal] [PubMed]

•	Paradoxical GABA-mediated excitation (Lewin et al. 2012) [Model]

Lin RJ, Jaeger D (2011) Using computer simulations to determine the limitations of dynamic clamp stimuli applied at the soma in mimicking distributed conductance sources. J Neurophysiol 105:2610-24 [Journal] [PubMed]

Marasco A, Limongiello A, Migliore M (2012) Fast and accurate low-dimensional reduction of biophysically detailed neuron models. Sci Rep 2:928 [Journal] [PubMed]

•	Ca1 pyramidal neuron: reduction model (Marasco et al. 2012) [Model]

Menon V, Musial TF, Liu A, Katz Y, Kath WL, Spruston N, Nicholson DA (2013) Balanced synaptic impact via distance-dependent synapse distribution and complementary expression of AMPARs and NMDARs in hippocampal dendrites. Neuron 80:1451-63 [Journal] [PubMed]

•	Distance-dependent synaptic strength in CA1 pyramidal neurons (Menon et al. 2013) [Model]

Migliore M, De Blasi I, Tegolo D, Migliore R (2011) A modeling study suggesting how a reduction in the context-dependent input on CA1 pyramidal neurons could generate schizophrenic behavior. Neural Netw 24:552-9 [Journal] [PubMed]

•	CA1 pyramidal neuron: schizophrenic behavior (Migliore et al. 2011) [Model]

Migliore M, De Simone G, Migliore R (2015) Effect of the initial synaptic state on the probability to induce long-term potentiation and depression. Biophys J 108:1038-46 [Journal] [PubMed]

•	Effect of the initial synaptic state on the probability to induce LTP and LTD (Migliore et al. 2015) [Model]

Migliore M, Ferrante M, Ascoli GA (2005) Signal propagation in oblique dendrites of CA1 pyramidal cells. J Neurophysiol 94:4145-55 [Journal] [PubMed]

•	CA1 pyramidal neuron: signal propagation in oblique dendrites (Migliore et al 2005) [Model]

Migliore M, Novara G, Tegolo D (2008) Single neuron binding properties and the magical number 7. Hippocampus 18:1122-30 [Journal] [PubMed]

•	CA1 pyramidal neurons: binding properties and the magical number 7 (Migliore et al. 2008) [Model]

Migliore R, De Simone G, Leinekugel X, Migliore M (2017) The possible consequences for cognitive functions of external electric fields at power line frequency on hippocampal CA1 pyramidal neurons. Eur J Neurosci 45:1024-1031 [Journal] [PubMed]

•	Effects of electric fields on cognitive functions (Migliore et al 2016) [Model]

Narayanan R, Johnston D (2008) The h channel mediates location dependence and plasticity of intrinsic phase response in rat hippocampal neurons. J Neurosci 28:5846-60 [Journal] [PubMed]

•	Resonance properties through Chirp stimulus responses (Narayanan Johnston 2007, 2008) [Model]

Narayanan R, Johnston D (2010) The h current is a candidate mechanism for regulating the sliding modification threshold in a BCM-like synaptic learning rule. J Neurophysiol 104:1020-33 [Journal] [PubMed]

•	BCM-like synaptic plasticity with conductance-based models (Narayanan Johnston, 2010) [Model]

Nevian T, Larkum ME, Polsky A, Schiller J (2007) Properties of basal dendrites of layer 5 pyramidal neurons: a direct patch-clamp recording study. Nat Neurosci 10:206-14 [Journal] [PubMed]

•	Dendritic Na+ spike initiation and backpropagation of APs in active dendrites (Nevian et al. 2007) [Model]

Nicholson DA, Trana R, Katz Y, Kath WL, Spruston N, Geinisman Y (2006) Distance-dependent differences in synapse number and AMPA receptor expression in hippocampal CA1 pyramidal neurons. Neuron 50:431-42 [Journal] [PubMed]

Parekh R, Ascoli GA (2013) Neuronal morphology goes digital: a research hub for cellular and system neuroscience. Neuron 77:1017-38 [Journal] [PubMed]

•	Neuronal morphology goes digital ... (Parekh & Ascoli 2013) [Model]

Royeck M, Horstmann MT, Remy S, Reitze M, Yaari Y, Beck H (2008) Role of axonal NaV1.6 sodium channels in action potential initiation of CA1 pyramidal neurons. J Neurophysiol 100:2361-80 [Journal] [PubMed]

•	Axonal NaV1.6 Sodium Channels in AP Initiation of CA1 Pyramidal Neurons (Royeck et al. 2008) [Model]

Shu Y, Duque A, Yu Y, Haider B, McCormick DA (2007) Properties of action-potential initiation in neocortical pyramidal cells: evidence from whole cell axon recordings. J Neurophysiol 97:746-60 [Journal] [PubMed]

•	Intracortical synaptic potential modulation by presynaptic somatic potential (Shu et al. 2006, 2007) [Model]

Spera E, Migliore M, Unsworth N, Tegolo D (2016) On the cellular mechanisms underlying working memory capacity in humans Neural Network World 4:335-359 [Journal]

•	Model of CA1 activity during working memory task (Spera et al. 2016) [Model]

Sun Q, Srinivas KV, Sotayo A, Siegelbaum SA (2014) Dendritic Na+ spikes enable cortical input to drive action potential output from hippocampal CA2 pyramidal neurons. Elife [Journal] [PubMed]

Tamosiunaite M, Porr B, Wörgötter F (2007) Self-influencing synaptic plasticity: recurrent changes of synaptic weights can lead to specific functional properties. J Comput Neurosci 23:113-27 [Journal] [PubMed]

•	Self-influencing synaptic plasticity (Tamosiunaite et al. 2007) [Model]

Traub RD, Contreras D, Whittington MA (2005) Combined experimental/simulation studies of cellular and network mechanisms of epileptogenesis in vitro and in vivo. J Clin Neurophysiol 22:330-42 [PubMed]

•	Collection of simulated data from a thalamocortical network model (Glabska, Chintaluri, Wojcik 2017) [Model]
•	A single column thalamocortical network model (Traub et al 2005) [Model]

Wenger C, Paredes L, Rattay F (2011) Current-distance relations for microelectrode stimulation of pyramidal cells. Artif Organs 35:263-6 [Journal] [PubMed]