Citation Relationships

Legends: Link to a Model Reference cited by multiple papers


Segev I, London M (2000) Untangling dendrites with quantitative models. Science 290:744-50 [PubMed]

References and models cited by this paper

References and models that cite this paper

Agmon-Snir H, Carr CE, Rinzel J (1998) The role of dendrites in auditory coincidence detection. Nature 393:268-72 [Journal] [PubMed]
Agmon-Snir H, Segev I (1993) Signal delay and input synchronization in passive dendritic structures. J Neurophysiol 70:2066-85 [Journal] [PubMed]
Anderson JC, Binzegger T, Kahana O, Martin KA, Segev I (1999) Dendritic asymmetry cannot account for directional responses of neurons in visual cortex. Nat Neurosci 2:820-4 [Journal] [PubMed]
   Visual Cortex Neurons: Dendritic study (Anderson et al 1999) [Model]
Archie KA, Mel BW (2000) A model for intradendritic computation of binocular disparity. Nat Neurosci 3:54-63 [Journal] [PubMed]
   Visual Cortex Neurons: Dendritic computations (Archie, Mel 2000) [Model]
Bernander O, Douglas RJ, Martin KA, Koch C (1991) Synaptic background activity influences spatiotemporal integration in single pyramidal cells. Proc Natl Acad Sci U S A 88:11569-73 [PubMed]
Bernander O, Koch C, Douglas RJ (1994) Amplification and linearization of distal synaptic input to cortical pyramidal cells. J Neurophysiol 72:2743-53 [Journal] [PubMed]
Borg-Graham LJ (2000) Additional efficient computation of branched nerve equations: adaptive time step and ideal voltage clamp. J Comput Neurosci 8:209-26 [PubMed]
Borg-Graham LJ, Monier C, Frégnac Y (1998) Visual input evokes transient and strong shunting inhibition in visual cortical neurons. Nature 393:369-73 [Journal] [PubMed]
Borst A (1996) How do nerve cells compute? Dendritic integration in fly visual interneurones. Acta Physiol Scand 157:403-7 [Journal] [PubMed]
Borst A, Egelhaaf M (1992) In vivo imaging of calcium accumulation in fly interneurons as elicited by visual motion stimulation. Proc Natl Acad Sci U S A 89:4139-43 [PubMed]
Bower JM, Beeman D (1998) The Book Of Genesis: Exploring Realistic Neural Models With The General Neural Simulation System
Burke RE, ten Bruggencate G (1971) Electrotonic characteristics of alpha motoneurones of varying size. J Physiol 212:120 [PubMed]
Cash S, Yuste R (1999) Linear summation of excitatory inputs by CA1 pyramidal neurons. Neuron 22:383-94 [PubMed]
Cook EP, Johnston D (1999) Voltage-dependent properties of dendrites that eliminate location-dependent variability of synaptic input. J Neurophysiol 81:535-43 [Journal] [PubMed]
Copeland J (1996) Synthese 108:335
De Schutter E, Bower JM (1994) Simulated responses of cerebellar Purkinje cells are independent of the dendritic location of granule cell synaptic inputs. Proc Natl Acad Sci U S A 91:4736-40 [PubMed]
   Cerebellar purkinje cell (De Schutter and Bower 1994) [Model]
DeFelice LJ, Wanke E, Conti F (1975) Potassium and sodium current noise from squid axon membranes. Fed Proc 34:1338-42 [PubMed]
Douglas RJ, Martin KA, Whitteridge D (1988) Selective responses of visual cortical cells do not depend on shunting inhibition. Nature 332:642-4 [Journal] [PubMed]
Engert F, Bonhoeffer T (1999) Dendritic spine changes associated with hippocampal long-term synaptic plasticity. Nature 399:66-70 [Journal] [PubMed]
Fujita Y (1968) Activity of dendrites of single Purkinje cells and its relationship to so-called inactivation response in rabbit cerebellum. J Neurophysiol 31:131-41 [Journal] [PubMed]
Gamble E, Koch C (1987) The dynamics of free calcium in dendritic spines in response to repetitive synaptic input. Science 236:1311-5 [PubMed]
Haag J, Borst A (1997) Encoding of visual motion information and reliability in spiking and graded potential neurons. J Neurosci 17:4809-19 [Journal] [PubMed]
Haag J, Egelhaaf M, Borst A (1992) Dendritic integration of motion information in visual interneurons of the blowfly. Neurosci Lett 140:173-6 [PubMed]
Häusser M, Clark BA (1997) Tonic synaptic inhibition modulates neuronal output pattern and spatiotemporal synaptic integration. Neuron 19:665-78 [PubMed]
Häusser M, Spruston N, Stuart GJ (2000) Diversity and dynamics of dendritic signaling. Science 290:739-44 [PubMed]
Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed]
Hodgkin AL, Rushton WAH (1946) The electrical constants of a crustacean nerve fibre Proc R Soc London B Biol Sci 133:444-479
Hoffman DA, Johnston D (1998) Downregulation of transient K+ channels in dendrites of hippocampal CA1 pyramidal neurons by activation of PKA and PKC. J Neurosci 18:3521-8 [PubMed]
Hoffman DA, Magee JC, Colbert CM, Johnston D (1997) K+ channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature 387:869-75 [Journal] [PubMed]
Holmes WR (1986) A continuous cable method for determining the transient potential in passive dendritic trees of known geometry. Biol Cybern 55:115-24 [PubMed]
Hopfield JJ (1994) Phys Today 47:40
Jack JJ, Redman SJ (1971) The propagation of transient potentials in some linear cable structures. J Physiol 215:283-320 [PubMed]
Jack JJB, Noble D, Tsien RW (1983) Linear cable theory Electrical Current Flow in Excitable Cells, Jack JJB:Noble D:Tsien RW, ed. pp.25
Kamondi A, Acsády L, Buzsáki G (1998) Dendritic spikes are enhanced by cooperative network activity in the intact hippocampus. J Neurosci 18:3919-28 [PubMed]
Koch C (1984) Cable theory in neurons with active, linearized membranes. Biol Cybern 50:15-33 [PubMed]
Koch C (1999) Biophysics Of Computation: Information Processing in Single Neurons
Koch C, Poggio T, Torre V (1982) Retinal ganglion cells: a functional interpretation of dendritic morphology. Philos Trans R Soc Lond B Biol Sci 298:227-63 [Journal] [PubMed]
Larkum ME, Zhu JJ, Sakmann B (1999) A new cellular mechanism for coupling inputs arriving at different cortical layers. Nature 398:338-41 [Journal] [PubMed]
Laurent G, Seymour-Laurent KJ, Johnson K (1993) Dendritic excitability and a voltage-gated calcium current in locust nonspiking local interneurons. J Neurophysiol 69:1484-98 [Journal] [PubMed]
London M, Meunier C, Segev I (1999) Signal transfer in passive dendrites with nonuniform membrane conductance. J Neurosci 19:8219-33 [PubMed]
London M, Shraibman A, Segev I (2000) Soc Neurosci Abstr 1:1118
Magee JC (1998) Dendritic hyperpolarization-activated currents modify the integrative properties of hippocampal CA1 pyramidal neurons. J Neurosci 18:7613-24 [PubMed]
Magee JC, Cook EP (2000) Somatic EPSP amplitude is independent of synapse location in hippocampal pyramidal neurons. Nat Neurosci 3:895-903 [Journal] [PubMed]
   CA1 pyramidal neuron: Synaptic Scaling (Magee, Cook 2000) [Model]
Mainen ZF, Sejnowski TJ (1996) Influence of dendritic structure on firing pattern in model neocortical neurons. Nature 382:363-6 [Journal] [PubMed]
   Influence of dendritic structure on neocortical neuron firing patterns (Mainen and Sejnowski 1996) [Model]
Maletic-Savatic M, Malinow R, Svoboda K (1999) Rapid dendritic morphogenesis in CA1 hippocampal dendrites induced by synaptic activity. Science 283:1923-7 [PubMed]
Manwani A, Koch C (1999) Detecting and estimating signals in noisy cable structure, I: neuronal noise sources. Neural Comput 11:1797-829 [PubMed]
Markram H, Tsodyks M (1996) Redistribution of synaptic efficacy between neocortical pyramidal neurons. Nature 382:807-10 [Journal] [PubMed]
Mel BW (1992) NMDA-based pattern discrimination in a modeled cortical neuron. Neural Comput 4:502-517
Mel BW (1993) Synaptic integration in an excitable dendritic tree. J Neurophysiol 70:1086-101 [Journal] [PubMed]
Mel BW, Ruderman DL, Archie KA (1998) Translation-invariant orientation tuning in visual "complex" cells could derive from intradendritic computations. J Neurosci 18:4325-34 [PubMed]
Meunier C, Segev I (2001) Neurons as Physical Objects: Dynamics and Function. Neuro-Informatics and Neuronal Modelling., Moss F:Gielen S, ed. pp.353
Nicholson C, Llinas R (1971) Field potentials in the alligator cerebellum and theory of their relationship to Purkinje cell dendritic spikes. J Neurophysiol 34:509-31 [Journal] [PubMed]
Paré D, Shink E, Gaudreau H, Destexhe A, Lang EJ (1998) Impact of spontaneous synaptic activity on the resting properties of cat neocortical pyramidal neurons In vivo. J Neurophysiol 79:1450-60 [Journal] [PubMed]
Pinsky PF, Rinzel J (1994) Intrinsic and network rhythmogenesis in a reduced Traub model for CA3 neurons. J Comput Neurosci 1:39-60 [PubMed]
   CA3 pyramidal cell: rhythmogenesis in a reduced Traub model (Pinsky, Rinzel 1994) [Model]
RALL W (1959) Branching dendritic trees and motoneuron membrane resistivity. Exp Neurol 1:491-527 [PubMed]
RALL W (1962) Theory of physiological properties of dendrites. Ann N Y Acad Sci 96:1071-92 [PubMed]
Rall W (1964) Theoretical significance of dendritic trees for neuronal input output relations Neural Theory and Modeling, Reiss RF, ed. pp.73 [Journal]
   Effects of synaptic location and timing on synaptic integration (Rall 1964) [Model]
Rall W (1967) Distinguishing theoretical synaptic potentials computed for different soma-dendritic distributions of synaptic input. J Neurophysiol 30:1138-68 [Journal] [PubMed]
Rall W (1969) Distributions of potential in cylindrical coordinates and time constants for a membrane cylinder. Biophys J 9:1509-41 [Journal] [PubMed]
Rall W (1974) Cellular Mechanisms Subserving Changes In Neuronal Activity, Woody CD:Brown KA:Crow TJ:Knispel JD, ed. pp.13
Rall W, Burke RE, Smith TG, Nelson PG, Frank K (1967) Dendritic location of synapses and possible mechanisms for the monosynaptic EPSP in motoneurons. J Neurophysiol 30:1169-93 [Journal] [PubMed]
Rall W, Rinzel J (1973) Branch input resistance and steady attenuation for input to one branch of a dendritic neuron model. Biophys J 13:648-87 [Journal] [PubMed]
Rall W, Shepherd GM, Reese TS, Brightman MW (1966) Dendrodendritic synaptic pathway for inhibition in the olfactory bulb. Exp Neurol 14:44-56 [PubMed]
Rapp M, Yarom Y, Segev I (1992) The impact of parallel fiber background activity on the cable properties of cerebellar Purkinje cells Neural Comput 4:518-533
Redman S, Walmsley B (1983) The time course of synaptic potentials evoked in cat spinal motoneurones at identified group Ia synapses. J Physiol 343:117-33 [PubMed]
Reyes AD, Rubel EW, Spain WJ (1994) Membrane properties underlying the firing of neurons in the avian cochlear nucleus. J Neurosci 14:5352-64 [PubMed]
Rieke F, Warland D, de Ruyter van Stevenink RR, Bialek W (1996) Spikes: Exploring The Language Of The Brain
Rinzel J, Rall W (1974) Transient response in a dendritic neuron model for current injected at one branch. Biophys J 14:759-90 [Journal] [PubMed]
Schneidman E, Freedman B, Segev I (1998) Ion channel stochasticity may be critical in determining the reliability and precision of spike timing. Neural Comput 10:1679-703 [PubMed]
Schoppa NE, Westbrook GL (1999) Regulation of synaptic timing in the olfactory bulb by an A-type potassium current. Nat Neurosci 2:1106-13 [Journal] [PubMed]
Schwindt PC, Crill WE (1995) Amplification of synaptic current by persistent sodium conductance in apical dendrite of neocortical neurons. J Neurophysiol 74:2220-4 [Journal] [PubMed]
Segev I, Fleshman JW, Burke RE (1998) Compartmental models of complex neurons Methods in Neuronal Modeling, Koch C:Segev I, ed. pp.93
Segev I, London M (1999) A theoretical view of passive and active dendrites Dendrites, Stuart G:Spruston N:Hausser M, ed. pp.205
Segev I, Rall W (1988) Computational study of an excitable dendritic spine. J Neurophysiol 60:499-523 [Journal] [PubMed]
Segev I, Rall W (1998) Excitable dendrites and spines: earlier theoretical insights elucidate recent direct observations. Trends Neurosci 21:453-60 [PubMed]
Segev I, Rall W, Shepherd GM (1995) The Theoretical Foundation Of Dendritic Function
Shepherd GM (1996) The dendritic spine: a multifunctional integrative unit. J Neurophysiol 75:2197-210 [Journal] [PubMed]
Shepherd GM, Brayton RK, Miller JP, Segev I, Rinzel J, Rall W (1985) Signal enhancement in distal cortical dendrites by means of interactions between active dendritic spines. Proc Natl Acad Sci U S A 82:2192-5 [PubMed]
Siegel M, Marder E, Abbott LF (1994) Activity-dependent current distributions in model neurons. Proc Natl Acad Sci U S A 91:11308-12 [PubMed]
Single S, Borst A (1998) Dendritic integration and its role in computing image velocity. Science 281:1848-50 [PubMed]
Single S, Haag J, Borst A (1997) Dendritic computation of direction selectivity and gain control in visual interneurons. J Neurosci 17:6023-30 [PubMed]
Sobel EC, Tank DW (1993) Timing of odor stimulation does not alter patterning of olfactory bulb unit activity in freely breathing rats. J Neurophysiol 69:1331-7 [Journal] [PubMed]
Softky W (1994) Sub-millisecond coincidence detection in active dendritic trees. Neuroscience 58:13-41 [PubMed]
Stemmler M, Koch C (1999) How voltage-dependent conductances can adapt to maximize the information encoded by neuronal firing rate. Nat Neurosci 2:521-7 [Journal] [PubMed]
Stratford KJ, Mason AJR, Larkman AU, Major G, Jack JJB (1989) The modelling of pyramidal neurones in the visual cortex The Computing Neuron, Durbin R:Miall C:Mitchison G, ed. pp.296
Stuart G, Spruston N (1995) Probing dendritic function with patch pipettes. Curr Opin Neurobiol 5:389-94 [PubMed]
Svoboda K, Helmchen F, Denk W, Tank DW (1999) Spread of dendritic excitation in layer 2/3 pyramidal neurons in rat barrel cortex in vivo. Nat Neurosci 2:65-73 [Journal] [PubMed]
Traub RD, Wong RK, Miles R, Michelson H (1991) A model of a CA3 hippocampal pyramidal neuron incorporating voltage-clamp data on intrinsic conductances. J Neurophysiol 66:635-50 [Journal] [PubMed]
Tuckwell HC (1988) Introduction to Theoretical Neurobiology. Volume 2: Nonlinear and Stochastic Theories
Turrigiano GG, Leslie KR, Desai NS, Rutherford LC, Nelson SB (1998) Activity-dependent scaling of quantal amplitude in neocortical neurons. Nature 391:892-6 [Journal] [PubMed]
Ulrich D, Stricker C (2000) Dendrosomatic voltage and charge transfer in rat neocortical pyramidal cells in vitro. J Neurophysiol 84:1445-52 [Journal] [PubMed]
White JA, Rubinstein JT, Kay AR (2000) Channel noise in neurons. Trends Neurosci 23:131-7 [PubMed]
Wilson CJ (1995) Dynamic modification of dendritic cable properties and synaptic transmission by voltage-gated potassium channels. J Comput Neurosci 2:91-115 [PubMed]
Yuste R, Majewska A, Holthoff K (2000) From form to function: calcium compartmentalization in dendritic spines. Nat Neurosci 3:653-9 [Journal] [PubMed]
Zador A, Pearlmutter B (1996) Neural Comput 8:611
Bui TV, Cushing S, Dewey D, Fyffe RE, Rose PK (2003) Comparison of the morphological and electrotonic properties of Renshaw cells, Ia inhibitory interneurons, and motoneurons in the cat. J Neurophysiol 90:2900-18 [Journal] [PubMed]
Carlson BA, Kawasaki M (2006) Stimulus selectivity is enhanced by voltage-dependent conductances in combination-sensitive neurons. J Neurophysiol 96:3362-77 [Journal] [PubMed]
   Combination sensitivity and active conductances (Carlson and Kawasaki 2006) [Model]
Cataldo E, Brunelli M, Byrne JH, Av-Ron E, Cai Y, Baxter DA (2005) Computational model of touch sensory cells (T Cells) of the leech: role of the afterhyperpolarization (AHP) in activity-dependent conduction failure. J Comput Neurosci 18:5-24 [Journal] [PubMed]
   Touch Sensory Cells (T Cells) of the Leech (Cataldo et al. 2004) (Scuri et al. 2007) [Model]
Desjardins AE, Li YX, Reinker S, Miura RM, Neuman RS (2003) The influences of Ih on temporal summation in hippocampal CA1 pyramidal neurons: a modeling study. J Comput Neurosci 15:131-42 [PubMed]
García-Grajales JA, Rucabado G, García-Dopico A, Peña JM, Jérusalem A (2015) Neurite, a finite difference large scale parallel program for the simulation of electrical signal propagation in neurites under mechanical loading. PLoS One 10:e0116532 [Journal] [PubMed]
   Neurite: electrophysiological-mechanical coupling simulation framework (Garcia-Grajales et al 2015) [Model]
Gleeson P, Steuber V, Silver RA (2007) neuroConstruct: a tool for modeling networks of neurons in 3D space. Neuron 54:219-35 [Journal] [PubMed]
Gulledge AT, Carnevale NT, Stuart GJ (2012) Electrical advantages of dendritic spines. PLoS One 7:e36007 [Journal] [PubMed]
Hanson JE, Smith Y, Jaeger D (2004) Sodium channels and dendritic spike initiation at excitatory synapses in globus pallidus neurons. J Neurosci 24:329-40 [Journal] [PubMed]
Hao J, Wang XD, Dan Y, Poo MM, Zhang XH (2009) An arithmetic rule for spatial summation of excitatory and inhibitory inputs in pyramidal neurons. Proc Natl Acad Sci U S A 106:21906-11 [Journal] [PubMed]
   Spatial summation of excitatory and inhibitory inputs in pyramidal neurons (Hao et al. 2010) [Model]
Häusser M, Mel B (2003) Dendrites: bug or feature? Curr Opin Neurobiol 13:372-83 [PubMed]
Hiratani N, Fukai T (2018) Redundancy in synaptic connections enables neurons to learn optimally. Proc Natl Acad Sci U S A 115:E6871-E6879 [Journal] [PubMed]
   A model of optimal learning with redundant synaptic connections (Hiratani & Fukai 2018) [Model]
Holmes WR, Ambros-Ingerson J, Grover LM (2006) Fitting experimental data to models that use morphological data from public databases. J Comput Neurosci 20:349-65 [Journal] [PubMed]
J?drzejewski-Szmek Z, Abrahao KP, J?drzejewska-Szmek J, Lovinger DM, Blackwell KT (2018) Parameter Optimization Using Covariance Matrix Adaptation-Evolutionary Strategy (CMA-ES), an Approach to Investigate Differences in Channel Properties Between Neuron Subtypes. Front Neuroinform 12:47 [Journal] [PubMed]
   Parameter optimization using CMA-ES (Jedrzejewski-Szmek et al 2018) [Model]
Kim H (2017) Impact of the localization of dendritic calcium persistent inward current on the input-output properties of spinal motoneuron pool: a computational study. J Appl Physiol (1985) 123:1166-1187 [Journal] [PubMed]
   Locational influence of dendritic PIC on input-output properties of spinal motoneurons (Kim 2017) [Model]
Kim H, Jones KE, Heckman CJ (2014) Asymmetry in signal propagation between the soma and dendrites plays a key role in determining dendritic excitability in motoneurons. PLoS One 9:e95454 [Journal] [PubMed]
   Locational influence of dendritic PIC on input-output properties of spinal motoneurons (Kim 2017) [Model]
Kozloski J, Wagner J (2011) An Ultrascalable Solution to Large-scale Neural Tissue Simulation. Front Neuroinform 5:15 [Journal] [PubMed]
Kurian M, Crook SM, Jung R (2011) Motoneuron model of self-sustained firing after spinal cord injury. J Comput Neurosci 31:625-45 [Journal] [PubMed]
   Motoneuron model of self-sustained firing after spinal cord injury (Kurian et al. 2011) [Model]
London M, Schreibman A, Häusser M, Larkum ME, Segev I (2002) The information efficacy of a synapse. Nat Neurosci 5:332-40 [Journal] [PubMed]
Lovelace JJ, Cios KJ (2008) A very simple spiking neuron model that allows for modeling of large, complex systems. Neural Comput 20:65-90 [Journal] [PubMed]
Migliore M, Shepherd GM (2002) Emerging rules for the distributions of active dendritic conductances. Nat Rev Neurosci 3:362-70 [Journal] [PubMed]
   Modulation of temporal integration window (Migliore, Shepherd 2002) [Model]
Narayanan R, Narayan A, Chattarji S (2005) A probabilistic framework for region-specific remodeling of dendrites in three-dimensional neuronal reconstructions. Neural Comput 17:75-96 [Journal] [PubMed]
   Region-specific atrophy in dendrites (Narayanan, Narayan, Chattarji, 2005) [Model]
Ostroumov K (2007) A new stochastic tridimensional model of neonatal rat spinal motoneuron for investigating compartmentalization of neuronal conductances and their influence on firing. J Neurosci Methods 163:362-72 [Journal] [PubMed]
   Stochastic 3D model of neonatal rat spinal motoneuron (Ostroumov 2007) [Model]
Papoutsi A, Sidiropoulou K, Cutsuridis V, Poirazi P (2013) Induction and modulation of persistent activity in a layer V PFC microcircuit model. Front Neural Circuits 7:161 [Journal] [PubMed]
   L5 PFC microcircuit used to study persistent activity (Papoutsi et al. 2014, 2013) [Model]
Reed MC, Blum JJ, Mitchell CC (2002) Precision of neural timing: effects of convergence and time-windowing. J Comput Neurosci 13:35-47 [PubMed]
Saraga F, Wu CP, Zhang L, Skinner FK (2003) Active dendrites and spike propagation in multi-compartment models of oriens-lacunosum/moleculare hippocampal interneurons. J Physiol 552:673-89 [Journal] [PubMed]
   Active dendrites and spike propagation in a hippocampal interneuron (Saraga et al 2003) [Model]
Takashima A, Hikosaka R, Takahata M (2006) Functional significance of passive and active dendritic properties in the synaptic integration by an identified nonspiking interneuron of crayfish. J Neurophysiol 96:3157-69 [Journal] [PubMed]
   Synaptic integration of an identified nonspiking interneuron in crayfish (Takashima et al 2006) [Model]
van Ooyen A, Duijnhouwer J, Remme MW, van Pelt J (2002) The effect of dendritic topology on firing patterns in model neurons. Network 13:311-25 [PubMed]
Williams SR, Stuart GJ (2002) Dependence of EPSP efficacy on synapse location in neocortical pyramidal neurons. Science 295:1907-10 [Journal] [PubMed]
(126 refs)