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5-neuron-model of neocortex for producing realistic extracellular AP shapes (Van Dijck et al. 2012)
 
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Model Information
Model File
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Accession:
226812
This is a 5-neuron model of neocortex, containing one tufted layer-5 pyramidal cell, two non-tufted pyramidal cells, and two inhibitory interneurons. It was used to reproduce extracellular spike shapes in a study comparing algorithms for spike sorting and electrode selection. The neuron models are adapted from Dyhrfjeld-Johnsen et al. (2005).
Reference:
1 .
Van Dijck G, Seidl K, Paul O, Ruther P, Van Hulle MM, Maex R (2012) Enhancing the yield of high-density electrode arrays through automated electrode selection.
Int J Neural Syst
22
:1-19
[
PubMed
]
Citations
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Model Information
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Model Type:
Extracellular;
Neuron or other electrically excitable cell;
Realistic Network;
Brain Region(s)/Organism:
Cell Type(s):
Neocortex U1 L5B pyramidal pyramidal tract GLU cell;
Neocortex U1 L2/6 pyramidal intratelencephalic GLU cell;
Channel(s):
Gap Junctions:
Receptor(s):
Gene(s):
Transmitter(s):
Simulation Environment:
GENESIS;
Model Concept(s):
Implementer(s):
Maex, Reinoud [reinoud at bbf.uia.ac.be];
Search NeuronDB
for information about:
Neocortex U1 L5B pyramidal pyramidal tract GLU cell
;
Neocortex U1 L2/6 pyramidal intratelencephalic GLU cell
;
/
Five-neuron-neocortex
Electrodes
Fibres
Granule_cell
L5P37C
L5P37C-notuft
L5P37C-onlybasal
Network_5neuron_IMTEK
Output
README.html
screenshot_a.png
screenshot2.png
screenshot3.png
screenshot4.png
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