[fixed]
morph.Vrest = -90.220509483 -90.220509483 -90.220509483 True
h.v_init = -70.0432010302 -70.0432010302 -70.0432010302 True
morph.kdmc_gbar = 0.000916263431341 0.000916263431341 0.000916263431341 True
morph.cap = 0.700445928608 0.700445928608 0.7004459286080 True
morph.spinecapfactor = 1.48057846279 1.48057846279 1.48057846279 True
morph.rall = 137.494564931 137.494564931 137.494564931 TruePTcell
morph.rm = 38457.4393085 38457.4393085 38457.4393085 True
morph.h_gbar = 6.6129403774e-05 6.6129403774e-05 6.6129403774e-05 True
[params]
# each param is assignment string (comma-separated variable names), min, max, original, bounded
morph.kdmc_gbar = 0.000725698962891 0.00114999553934 0.000916263431341 False
morph.kBK_gpeak = 4.63449910469e-05 7.41871806763e-05 6e-05 False
morph.cal_gcalbar = 3.9402995e-06 6.06015e-06 5e-06 False
morph.can_gcanbar = 3.9601e-06 6.27546347488e-06 5e-06 False
morph.kap_gbar = 0.04 0.0689923565988 0.05 False
morph.kdr_gbar = 0.00494043336051 0.0086984469343 0.007 False
morph.nax_gbar = 0.0116673995259 0.024 0.02 False
morph.kBK_caVhminShift = 44.7725194146 54.1455684051 50.0 False
morph.cadad_taur = 1.0 100.0 1.0 False
morph.cadad_depth = 0.0864623739218 0.113341526033 0.1 False
[run]
#cellimport is the py file that has code for creating a cell
cellimport = morph
#cellfunc is function that returns a cell
cellfunc = Cell
# this cellfuncargs argument specifies morphology
cellfuncargs = 'BS0284.ASC'
#postassign called after params assigned to the global variables to set in cell
postassign = cell.reconfig()
#locations to record voltage from. first location recorded from is used in voltage optimization
recordV = cell.soma[0](0.5)
#recordSpike is location where spikes are recorded from
#morph.py syntax
recordSpike = cell.soma[0](0.5)
usecvode = True
tstop = 3000.0
baset = 1000.0
stimdel = 500.0
stimdur = 1000.0
[data]
#experimental voltage traces - in entirety
evolts = data/BS0284_tracedata_10KHz.npy
# stimulus amplitudes
lstimamp = data/BS0284_lstimamp.npy
# sampling rate
sampr = 10000
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