Advanced search
User account
Login
Register
Find models by
Model name
First author
Each author
Find models for
Brain region
Concept
Find models of
Realistic Microcircuits
Connectionist Networks
CA1 pyramidal neuron: as a 2-layer NN and subthreshold synaptic summation (Poirazi et al 2003)
Download zip file
Auto-launch
Help downloading and running models
Model Information
Model File
Model Views
Simulation Platform
Versions
Accession:
20212
We developed a CA1 pyramidal cell model calibrated with a broad spectrum of in vitro data. Using simultaneous dendritic and somatic recordings, and combining results for two different response measures (peak vs. mean EPSP), two different stimulus formats (single shock vs. 50 Hz trains), and two different spatial integration conditions (within vs. between-branch summation), we found the cell's subthreshold responses to paired inputs are best described as a sum of nonlinear subunit responses, where the subunits correspond to different dendritic branches. In addition to suggesting a new type of experiment and providing testable predictions, our model shows how conclusions regarding synaptic arithmetic can be influenced by an array of seemingly innocuous experimental design choices.
Reference:
1 .
Poirazi P, Brannon T, Mel BW (2003) Arithmetic of subthreshold synaptic summation in a model CA1 pyramidal cell.
Neuron
37
:977-87
[
PubMed
]
2 .
Poirazi P, Brannon T, Mel BW (2003) Pyramidal neuron as two-layer neural network.
Neuron
37
:989-99
[
PubMed
]
3 .
Poirazi P, Brannon T, Mel BW (2003ab-sup) Online Supplement: About the Model
Neuron
37 Online
:1-20
4 .
Polsky A, Mel BW, Schiller J (2004) Computational subunits in thin dendrites of pyramidal cells.
Nat Neurosci
7
:621-7
[
PubMed
]
Citations
Citation Browser
Model Information
(Click on a link to find other models with that property)
Model Type:
Neuron or other electrically excitable cell;
Brain Region(s)/Organism:
Cell Type(s):
Hippocampus CA1 pyramidal GLU cell;
Channel(s):
I Na,p;
I Na,t;
I L high threshold;
I T low threshold;
I A;
I K;
I M;
I h;
I K,Ca;
I Calcium;
Gap Junctions:
Receptor(s):
GabaA;
GabaB;
NMDA;
Glutamate;
Gene(s):
Transmitter(s):
Simulation Environment:
NEURON;
Model Concept(s):
Action Potential Initiation;
Activity Patterns;
Dendritic Action Potentials;
Active Dendrites;
Influence of Dendritic Geometry;
Detailed Neuronal Models;
Action Potentials;
Depression;
Delay;
Implementer(s):
Poirazi, Panayiota [poirazi at imbb.forth.gr];
Search NeuronDB
for information about:
Hippocampus CA1 pyramidal GLU cell
;
GabaA
;
GabaB
;
NMDA
;
Glutamate
;
I Na,p
;
I Na,t
;
I L high threshold
;
I T low threshold
;
I A
;
I K
;
I M
;
I h
;
I K,Ca
;
I Calcium
;
Download the displayed file
/
CA1_multi
mechanism
not-currently-used
abbott.mod
abbott_nmda.mod
borgkm.mod
ca.mod
cachan.mod
cacum.mod
cad_trunk.mod
cad3.mod
cadecay.mod
*
Other models using cadecay.mod:
A Model Circuit of Thalamocortical Convergence (Behuret et al. 2013)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
cadifusl.mod
cagk.mod
cal.mod
calH.mod
can2.mod
canKev.mod
capump.mod
cat.mod
h.mod
hh3.mod
hh3_flei.mod
hha.mod
ht.mod
ican.mod
iq.mod
it.mod
it1.mod
ITGHK.mod
*
Other models using ITGHK.mod:
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
kad.mod
*
Other models using kad.mod:
CA1 network model for place cell dynamics (Turi et al 2019)
CA1 network model: interneuron contributions to epileptic deficits (Shuman et al 2019)
Encoding and retrieval in a model of the hippocampal CA1 microcircuit (Cutsuridis et al. 2009)
Long time windows from theta modulated inhib. in entorhinal–hippo. loop (Cutsuridis & Poirazi 2015)
kap.mod
*
Other models using kap.mod:
Encoding and retrieval in a model of the hippocampal CA1 microcircuit (Cutsuridis et al. 2009)
Long time windows from theta modulated inhib. in entorhinal–hippo. loop (Cutsuridis & Poirazi 2015)
kc.mod
kca.mod
kdr.mod
kdr_inac.mod
kdrca1.mod
kv.mod
*
Other models using kv.mod:
Mechanisms of magnetic stimulation of central nervous system neurons (Pashut et al. 2011)
Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2003)
STDP depends on dendritic synapse location (Letzkus et al. 2006)
Selective control of cortical axonal spikes by a slowly inactivating K+ current (Shu et al. 2007)
My_cal.mod
My_can.mod
My_cat.mod
my_kca.mod
Myca.mod
Mykca.mod
na.mod
*
Other models using na.mod:
Mechanisms of magnetic stimulation of central nervous system neurons (Pashut et al. 2011)
Pyramidal neuron coincidence detection tuned by dendritic branching pattern (Schaefer et al 2003)
STDP depends on dendritic synapse location (Letzkus et al. 2006)
Selective control of cortical axonal spikes by a slowly inactivating K+ current (Shu et al. 2007)
na3.mod
namir.mod
nax.mod
ourca_old.mod
vkca.mod
abbott.o
abbott_nmda.c
h.pl
ITGHK.o
mod_func.c
test.hoc
test2.hoc
testh.hoc
VClamp.omod
*
Other models using VClamp.omod:
Low Threshold Calcium Currents in TC cells (Destexhe et al 1998)
T channel currents (Vitko et al 2005)
T channel currents (Vitko et al 2005)
T channel currents (Vitko et al 2005)
Thalamic reticular neurons: the role of Ca currents (Destexhe et al 1996)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
Thalamocortical Relay cell under current clamp in high-conductance state (Zeldenrust et al 2018)
create soma access soma insert h for i=-80,70 { ninf_h() }
Load Model Views
Disperse 6_2