Citations for Correcting space clamp in dendrites (Schaefer et al. 2003 and 2007)
| Legends: | Link to a Model | Reference cited by multiple papers |
Schaefer AT, Helmstaedter M, Sakmann B, Korngreen A (2003) Correction of conductance measurements in non-space-clamped structures: 1. Voltage-gated K+ channels. Biophys J 84:3508-28 [PubMed]
References and models cited by this paper | References and models that cite this paper | |||||||||||||||||
Adrian RH, Chandler WK, Hodgkin AL (1970) Voltage clamp experiments in striated muscle fibres. J Physiol 208:607-44 [PubMed]
Armstrong CM, Gilly WF (1992) Access resistance and space clamp problems associated with whole-cell patch clamping. Methods Enzymol 207:100-22 [PubMed] Augustine GJ, Charlton MP, Smith SJ (1985) Calcium entry and transmitter release at voltage-clamped nerve terminals of squid. J Physiol 367:163-81 [PubMed] Bekkers JM (2000) Distribution and activation of voltage-gated potassium channels in cell-attached and outside-out patches from large layer 5 cortical pyramidal neurons of the rat. J Physiol 525 Pt 3:611-20 [PubMed] Benardo LS, Masukawa LM, Prince DA (1982) Electrophysiology of isolated hippocampal pyramidal dendrites. J Neurosci 2:1614-22 [PubMed] Bischofberger J, Jonas P (1997) Action potential propagation into the presynaptic dendrites of rat mitral cells. J Physiol 504 ( Pt 2):359-65 [PubMed] Clements JD, Redman SJ (1989) Cable properties of cat spinal motoneurones measured by combining voltage clamp, current clamp and intracellular staining. J Physiol 409:63-87 [PubMed] Cole KS (1941) RECTIFICATION AND INDUCTANCE IN THE SQUID GIANT AXON. J Gen Physiol 25:29-51 [PubMed] Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed] HODGKIN AL, HUXLEY AF (1952) A quantitative description of membrane current and its application to conduction and excitation in nerve. J Physiol 117:500-44 [Journal] [PubMed] Hoffman DA, Magee JC, Colbert CM, Johnston D (1997) K+ channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature 387:869-75 [Journal] [PubMed] Johnston D, Magee JC, Colbert CM, Cristie BR (1996) Active properties of neuronal dendrites. Annu Rev Neurosci 19:165-86 [Journal] [PubMed] Kavalali ET, Zhuo M, Bito H, Tsien RW (1997) Dendritic Ca2+ channels characterized by recordings from isolated hippocampal dendritic segments. Neuron 18:651-63 [PubMed] Koch C (1999) Biophysics Of Computation: Information Processing in Single Neurons Korngreen A, Sakmann B (2000) Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol 525 Pt 3:621-39 [PubMed]
Larsson HP, Kleene SJ, Lecar H (1997) Noise analysis of ion channels in non-space-clamped cables: estimates of channel parameters in olfactory cilia. Biophys J 72:1193-203 [Journal] [PubMed] Magee JC (1999) Dendritic lh normalizes temporal summation in hippocampal CA1 neurons. Nat Neurosci 2:508-14 [Journal] [PubMed] Magee JC, Johnston D (1995) Characterization of single voltage-gated Na+ and Ca2+ channels in apical dendrites of rat CA1 pyramidal neurons. J Physiol 487:67-90 [PubMed] Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ (1995) A model of spike initiation in neocortical pyramidal neurons. Neuron 15:1427-39 [PubMed]
Major G (1993) Solutions for transients in arbitrarily branching cables: III. Voltage clamp problems. Biophys J 65:469-91 [Journal] [PubMed] Major G, Evans JD, Jack JJ (1993) Solutions for transients in arbitrarily branching cables: II. Voltage clamp theory. Biophys J 65:450-68 [Journal] [PubMed] Major G, Larkman AU, Jonas P, Sakmann B, Jack JJ (1994) Detailed passive cable models of whole-cell recorded CA3 pyramidal neurons in rat hippocampal slices. J Neurosci 14:4613-38 [PubMed] Müller W, Lux HD (1993) Analysis of voltage-dependent membrane currents in spatially extended neurons from point-clamp data. J Neurophysiol 69:241-7 [Journal] [PubMed] Nadeau H, Lester HA (2000) Two-compartment model for whole-cell data analysis and transient compensation. J Neurosci Methods 99:25-35 [PubMed] Press WH, Teukolsky SA, Vellerling WT, Flannery BP (1992) Numerical Recipes In C: The Art Of Scientific Computing RALL W (1959) Branching dendritic trees and motoneuron membrane resistivity. Exp Neurol 1:491-527 [PubMed] Rall W, Burke RE, Holmes WR, Jack JJ, Redman SJ, Segev I (1992) Matching dendritic neuron models to experimental data. Physiol Rev 72:S159-86 [Journal] [PubMed] Rall W, Segev I (1985) Space-clamp problems when voltage clamping branched neurons with intracellular microelectrodes Voltage And Patch Clamping With Microelectrodes, Smith TG:Lecar H:Redman SJ:Gage P, ed. pp.191 Roth A, Häusser M (2001) Compartmental models of rat cerebellar Purkinje cells based on simultaneous somatic and dendritic patch-clamp recordings. J Physiol 535:445-72 [PubMed] Spruston N, Jaffe DB, Williams SH, Johnston D (1993) Voltage- and space-clamp errors associated with the measurement of electrotonically remote synaptic events. J Neurophysiol 70:781-802 [Journal] [PubMed] Stuart G, Spruston N (1995) Probing dendritic function with patch pipettes. Curr Opin Neurobiol 5:389-94 [PubMed] Stuart G, Spruston N (1998) Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. J Neurosci 18:3501-10 [Journal] [PubMed]
Stuart G, Spruston N, Sakmann B, Häusser M (1997) Action potential initiation and backpropagation in neurons of the mammalian CNS. Trends Neurosci 20:125-31 [PubMed] Stuart GJ, Dodt HU, Sakmann B (1993) Patch-clamp recordings from the soma and dendrites of neurons in brain slices using infrared video microscopy. Pflugers Arch 423:511-8 [PubMed] Stuart GJ, Sakmann B (1994) Active propagation of somatic action potentials into neocortical pyramidal cell dendrites. Nature 367:69-72 [Journal] [PubMed] Takigawa T, Alzheimer C (1999) G protein-activated inwardly rectifying K+ (GIRK) currents in dendrites of rat neocortical pyramidal cells. J Physiol 517 ( Pt 2):385-90 [PubMed] White JA, Sekar NS, Kay AR (1995) Errors in persistent inward currents generated by space-clamp errors: a modeling study. J Neurophysiol 73:2369-77 [Journal] [PubMed] Wilson CJ, Park MR (1989) Capacitance compensation and bridge balance adjustment in intracellular recording from dendritic neurons. J Neurosci Methods 27:51-75 [PubMed] | Bar-Yehuda D, Korngreen A (2008) Space-clamp problems when voltage clamping neurons expressing voltage-gated conductances. J Neurophysiol 99:1127-36 [Journal] [PubMed]
Castelfranco AM, Hartline DK (2004) Corrections for space-clamp errors in measured parameters of voltage-dependent conductances in a cylindrical neurite. Biol Cybern 90:280-90 [Journal] [PubMed] Häusser M (2003) Revealing the properties of dendritic voltage-gated channels: a new approach to the space clamp problem. Biophys J 84:3497-8 [PubMed] Huys QJ, Ahrens MB, Paninski L (2006) Efficient estimation of detailed single-neuron models. J Neurophysiol 96:872-90 [Journal] [PubMed]
Poleg-Polsky A, Diamond JS (2011) Imperfect Space Clamp Permits Electrotonic Interactions between Inhibitory and Excitatory Synaptic Conductances, Distorting Voltage Clamp Recordings.
PLoS ONE 6(4):e119463-. [Journal]
Schaefer AT, Helmstaedter M, Schmitt AC, Bar-Yehuda D, Almog M, Ben-Porat H, Sakmann B, Korngreen A (2007) Dendritic voltage-gated K+ conductance gradient in pyramidal neurones of neocortical layer 5B from rats. J Physiol 579:737-52 [Journal] [PubMed]
| |||||||||||||||||
Schaefer AT, Helmstaedter M, Schmitt AC, Bar-Yehuda D, Almog M, Ben-Porat H, Sakmann B, Korngreen A (2007) Dendritic voltage-gated K+ conductance gradient in pyramidal neurones of neocortical layer 5B from rats. J Physiol 579:737-52 [PubMed]
References and models cited by this paper | References and models that cite this paper | |||||||||||||||||||||||
Amitai Y, Friedman A, Connors BW, Gutnick MJ (1993) Regenerative activity in apical dendrites of pyramidal cells in neocortex. Cereb Cortex 3:26-38 [PubMed] Antic SD (2003) Action potentials in basal and oblique dendrites of rat neocortical pyramidal neurons. J Physiol 550:35-50 [Journal] [PubMed] Bekkers JM (2000) Distribution and activation of voltage-gated potassium channels in cell-attached and outside-out patches from large layer 5 cortical pyramidal neurons of the rat. J Physiol 525 Pt 3:611-20 [PubMed] Bekkers JM (2000) Properties of voltage-gated potassium currents in nucleated patches from large layer 5 cortical pyramidal neurons of the rat. J Physiol 525 Pt 3:593-609 [PubMed] Bischofberger J, Jonas P (1997) Action potential propagation into the presynaptic dendrites of rat mitral cells. J Physiol 504 ( Pt 2):359-65 [PubMed] Clements JD, Redman SJ (1989) Cable properties of cat spinal motoneurones measured by combining voltage clamp, current clamp and intracellular staining. J Physiol 409:63-87 [PubMed] Colbert CM, Pan E (2002) Ion channel properties underlying axonal action potential initiation in pyramidal neurons. Nat Neurosci 5:533-8 [Journal] [PubMed] Cole KS, Curtis HJ (1941) MEMBRANE POTENTIAL OF THE SQUID GIANT AXON DURING CURRENT FLOW. J Gen Physiol 24:551-63 [PubMed] Fenwick EM, Marty A, Neher E (1982) Sodium and calcium channels in bovine chromaffin cells. J Physiol 331:599-635 [PubMed] Finkel AS, Gage PW (1985) Conventional voltage clamping with two intracellular microelectrodes Voltage and Patch Clamping with Microelectrodes, Smith TG:Lecar H:Redman SR:Gage PW, ed. Häusser M (2003) Revealing the properties of dendritic voltage-gated channels: a new approach to the space clamp problem. Biophys J 84:3497-8 [PubMed] Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed] Hines ML, Carnevale NT (2000) Expanding NEURON's repertoire of mechanisms with NMODL. Neural Comput 12:995-1007 [Journal] [PubMed] Hoffman DA, Magee JC, Colbert CM, Johnston D (1997) K+ channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature 387:869-75 [Journal] [PubMed] Keren N, Peled N, Korngreen A (2005) Constraining compartmental models using multiple voltage recordings and genetic algorithms. J Neurophysiol 94:3730-42 [Journal] [PubMed] Kim HG, Connors BW (1993) Apical dendrites of the neocortex: correlation between sodium- and calcium-dependent spiking and pyramidal cell morphology. J Neurosci 13:5301-11 [PubMed] Korngreen A, Sakmann B (2000) Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol 525 Pt 3:621-39 [PubMed]
Larkum ME, Kaiser KM, Sakmann B (1999) Calcium electrogenesis in distal apical dendrites of layer 5 pyramidal cells at a critical frequency of back-propagating action potentials. Proc Natl Acad Sci U S A 96:14600-4 [PubMed] Larkum ME, Zhu JJ, Sakmann B (1999) A new cellular mechanism for coupling inputs arriving at different cortical layers. Nature 398:338-41 [Journal] [PubMed] Larkum ME, Zhu JJ, Sakmann B (2001) Dendritic mechanisms underlying the coupling of the dendritic with the axonal action potential initiation zone of adult rat layer 5 pyramidal neurons. J Physiol 533:447-66 [PubMed] Lisman JE (1997) Bursts as a unit of neural information: making unreliable synapses reliable. Trends Neurosci 20:38-43 [Journal] [PubMed] Llinás R, Sugimori M (1979) Calcium conductances in Purkinje cell dendrites: their role in development and integration. Prog Brain Res 51:323-34 [Journal] [PubMed] Llinás R, Sugimori M (1980) Electrophysiological properties of in vitro Purkinje cell dendrites in mammalian cerebellar slices. J Physiol 305:197-213 [PubMed] Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ (1995) A model of spike initiation in neocortical pyramidal neurons. Neuron 15:1427-39 [PubMed]
Major G, Larkman AU, Jonas P, Sakmann B, Jack JJ (1994) Detailed passive cable models of whole-cell recorded CA3 pyramidal neurons in rat hippocampal slices. J Neurosci 14:4613-38 [PubMed] Martina M, Yao GL, Bean BP (2003) Properties and functional role of voltage-dependent potassium channels in dendrites of rat cerebellar Purkinje neurons. J Neurosci 23:5698-707 [PubMed] Reuveni I, Friedman A, Amitai Y, Gutnick MJ (1993) Stepwise repolarization from Ca2+ plateaus in neocortical pyramidal cells: evidence for nonhomogeneous distribution of HVA Ca2+ channels in dendrites. J Neurosci 13:4609-21 [PubMed] Rhodes PA, Llinás RR (2001) Apical tuft input efficacy in layer 5 pyramidal cells from rat visual cortex. J Physiol 536:167-87 [PubMed] Roth A, Häusser M (2001) Compartmental models of rat cerebellar Purkinje cells based on simultaneous somatic and dendritic patch-clamp recordings. J Physiol 535:445-72 [PubMed] Schaefer AT, Helmstaedter M, Sakmann B, Korngreen A (2003) Correction of conductance measurements in non-space-clamped structures: 1. Voltage-gated K+ channels. Biophys J 84:3508-28 [Journal] [PubMed]
Schaefer AT, Larkum ME, Sakmann B, Roth A (2003) Coincidence detection in pyramidal neurons is tuned by their dendritic branching pattern. J Neurophysiol 89:3143-54 [Journal] [PubMed]
Schiller J, Schiller Y, Stuart G, Sakmann B (1997) Calcium action potentials restricted to distal apical dendrites of rat neocortical pyramidal neurons. J Physiol 505 ( Pt 3):605-16 [PubMed] Stuart G, Häusser M (1994) Initiation and spread of sodium action potentials in cerebellar Purkinje cells. Neuron 13:703-12 [PubMed] Stuart G, Spruston N (1998) Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. J Neurosci 18:3501-10 [Journal] [PubMed]
Stuart GJ, Dodt HU, Sakmann B (1993) Patch-clamp recordings from the soma and dendrites of neurons in brain slices using infrared video microscopy. Pflugers Arch 423:511-8 [PubMed] Vetter P, Roth A, Häusser M (2001) Propagation of action potentials in dendrites depends on dendritic morphology. J Neurophysiol 85:926-37 [Journal] [PubMed]
Zhu JJ (2000) Maturation of layer 5 neocortical pyramidal neurons: amplifying salient layer 1 and layer 4 inputs by Ca2+ action potentials in adult rat tuft dendrites. J Physiol 526 Pt 3:571-87 [PubMed] | Almog M, Korngreen A (2014) A Quantitative Description of Dendritic Conductances and Its Application to Dendritic Excitation in Layer 5 Pyramidal Neurons J Neurosci 34(1):182-196 [Journal] [PubMed]
Bar-Yehuda D, Korngreen A (2008) Space-clamp problems when voltage clamping neurons expressing voltage-gated conductances. J Neurophysiol 99:1127-36 [Journal] [PubMed]
Günay C, Sieling FH, Dharmar L, Lin WH, Wolfram V, Marley R, Baines RA, Prinz AA (2015) Distal spike initiation zone location estimation by morphological simulation of ionic current filtering demonstrated in a novel model of an identified Drosophila motoneuron. PLoS Comput Biol 11:e1004189 [Journal] [PubMed]
Pashut T, Wolfus S, Friedman A, Lavidor M, Bar-Gad I, Yeshurun Y, Korngreen A (2011) Mechanisms of magnetic stimulation of central nervous system neurons. PLoS Comput Biol 7:e1002022 [Journal] [PubMed]
Wang K, Riera J, Enjieu-Kadji H, Kawashima R (2013) The role of extracellular conductivity profiles in compartmental models for neurons: particulars for layer 5 pyramidal cells. Neural Comput 25:1807-52 [Journal] [PubMed]
| |||||||||||||||||||||||