Citations for Spiking neuron model of the basal ganglia (Humphries et al 2006)

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Humphries MD, Stewart RD, Gurney KN (2006) A physiologically plausible model of action selection and oscillatory activity in the basal ganglia. J Neurosci 26:12921-42 [PubMed]

References and models cited by this paper

References and models that cite this paper

Abeles M (1982) Quantification, smoothing, and confidence limits for single-units' histograms. J Neurosci Methods 5:317-25 [PubMed]
Aizman O, Brismar H, Uhlén P, Zettergren E, Levey AI, Forssberg H, Greengard P, Aperia A (2000) Anatomical and physiological evidence for D1 and D2 dopamine receptor colocalization in neostriatal neurons. Nat Neurosci 3:226-30 [Journal] [PubMed]
Albin RL, Young AB, Penney JB (1989) The functional anatomy of basal ganglia disorders. Trends Neurosci 12:366-75 [PubMed]
Alexander GE, Crutcher MD (1990) Functional architecture of basal ganglia circuits: neural substrates of parallel processing. Trends Neurosci 13:266-71 [PubMed]
Alexander GE, DeLong MR (1985) Microstimulation of the primate neostriatum. I. Physiological properties of striatal microexcitable zones. J Neurophysiol 53:1401-16 [Journal] [PubMed]
Alexander GE, DeLong MR, Strick PL (1986) Parallel organization of functionally segregated circuits linking basal ganglia and cortex. Annu Rev Neurosci 9:357-81 [Journal] [PubMed]
Amzica F, Steriade M (1995) Short- and long-range neuronal synchronization of the slow (< 1 Hz) cortical oscillation. J Neurophysiol 73:20-38 [Journal] [PubMed]
Atherton JF, Bevan MD (2005) Ionic mechanisms underlying autonomous action potential generation in the somata and dendrites of GABAergic substantia nigra pars reticulata neurons in vitro. J Neurosci 25:8272-81 [Journal] [PubMed]
Bar-Gad I, Heimer G, Ritov Y, Bergman H (2003) Functional correlations between neighboring neurons in the primate globus pallidus are weak or nonexistent. J Neurosci 23:4012-6 [PubMed]
Baufreton J, Zhu ZT, Garret M, Bioulac B, Johnson SW, Taupignon AI (2005) Dopamine receptors set the pattern of activity generated in subthalamic neurons. FASEB J 19:1771-7 [Journal] [PubMed]
Bauswein E, Fromm C, Preuss A (1989) Corticostriatal cells in comparison with pyramidal tract neurons: contrasting properties in the behaving monkey. Brain Res 493:198-203 [PubMed]
Beiser DG, Houk JC (1998) Model of cortical-basal ganglionic processing: encoding the serial order of sensory events. J Neurophysiol 79:3168-88 [Journal] [PubMed]
Beiser DG, Hua SE, Houk JC (1997) Network models of the basal ganglia. Curr Opin Neurobiol 7:185-90 [PubMed]
Beninger RJ, Mazurski EJ, Hoffman DC (2006) Receptor subtype-specific dopaminergic agents and unconditioned behavior. Pol J Pharmacol Pharm 43:507-28
Bennett BD, Wilson CJ (2000) Synaptology and physiology of neostriatal neurones Brain dynamics and the striatal complex, Miller R:Wickens J, ed.
Berke JD, Okatan M, Skurski J, Eichenbaum HB (2004) Oscillatory entrainment of striatal neurons in freely moving rats. Neuron 43:883-96 [Journal] [PubMed]
Berns GS, Sejnowski TJ (1995) How the basal ganglia make decisions Neurobiology of decision-making, Damasio A:Damasion H:Christen Y, ed. pp.101
Berns GS, Sejnowski TJ (1998) A computational model of how the basal ganglia produce sequences. J Cogn Neurosci 10:108-21 [PubMed]
Berretta S, Sachs Z, Graybiel AM (1999) Cortically driven Fos induction in the striatum is amplified by local dopamine D2-class receptor blockade. Eur J Neurosci 11:4309-19 [PubMed]
Beurrier C, Bioulac B, Hammond C (2000) Slowly inactivating sodium current (I(NaP)) underlies single-spike activity in rat subthalamic neurons. J Neurophysiol 83:1951-7 [Journal] [PubMed]
Beurrier C, Congar P, Bioulac B, Hammond C (1999) Subthalamic nucleus neurons switch from single-spike activity to burst-firing mode. J Neurosci 19:599-609 [PubMed]
Bevan MD, Bolam JP, Crossman AR (1994) Convergent synaptic input from the neostriatum and the subthalamus onto identified nigrothalamic neurons in the rat. Eur J Neurosci 6:320-34 [PubMed]
Bevan MD, Clarke NP, Bolam JP (1997) Synaptic integration of functionally diverse pallidal information in the entopeduncular nucleus and subthalamic nucleus in the rat. J Neurosci 17:308-24 [PubMed]
Bevan MD, Francis CM, Bolam JP (1995) The glutamate-enriched cortical and thalamic input to neurons in the subthalamic nucleus of the rat: convergence with GABA-positive terminals. J Comp Neurol 361:491-511 [Journal] [PubMed]
Bevan MD, Magill PJ, Hallworth NE, Bolam JP, Wilson CJ (2002) Regulation of the timing and pattern of action potential generation in rat subthalamic neurons in vitro by GABA-A IPSPs. J Neurophysiol 87:1348-62 [Journal] [PubMed]
Bevan MD, Wilson CJ (1999) Mechanisms underlying spontaneous oscillation and rhythmic firing in rat subthalamic neurons. J Neurosci 19:7617-28 [PubMed]
Blomfield S (1974) Arithmetical operations performed by nerve cells. Brain Res 69:115-24 [PubMed]
Bolam JP, Hanley JJ, Booth PA, Bevan MD (2000) Synaptic organisation of the basal ganglia. J Anat 196 ( Pt 4):527-42 [PubMed]
Boraud T, Brown P, Goldberg JA, Graybiel AM, Magill PJ (2005) Oscillations in the basal ganglia: the good, the bad, and the unexpected The basal ganglia VIII, Bolam JP:Ingham CA:Magill PJ, ed. pp.3
Bormann J (1988) Electrophysiology of GABAA and GABAB receptor subtypes. Trends Neurosci 11:112-6 [PubMed]
Brown LL, Sharp FR (1995) Metabolic mapping of rat striatum: somatotopic organization of sensorimotor activity. Brain Res 686:207-22 [PubMed]
Brown LL, Smith DM, Goldbloom LM (1998) Organizing principles of cortical integration in the rat neostriatum: corticostriate map of the body surface is an ordered lattice of curved laminae and radial points. J Comp Neurol 392:468-88 [PubMed]
Brown P, Kupsch A, Magill PJ, Sharott A, Harnack D, Meissner W (2002) Oscillatory local field potentials recorded from the subthalamic nucleus of the alert rat. Exp Neurol 177:581-5 [PubMed]
Brown P, Oliviero A, Mazzone P, Insola A, Tonali P, Di Lazzaro V (2001) Dopamine dependency of oscillations between subthalamic nucleus and pallidum in Parkinson's disease. J Neurosci 21:1033-8 [PubMed]
Cassidy M, Mazzone P, Oliviero A, Insola A, Tonali P, Di Lazzaro V, Brown P (2002) Movement-related changes in synchronization in the human basal ganglia. Brain 125:1235-46 [PubMed]
Cepeda C, Levine MS (1998) Dopamine and N-methyl-D-aspartate receptor interactions in the neostriatum. Dev Neurosci 20:1-18 [Journal] [PubMed]
Chang HT, Kita H, Kitai ST (1983) The fine structure of the rat subthalamic nucleus: an electron microscopic study. J Comp Neurol 221:113-23 [Journal] [PubMed]
Chevalier G, Deniau JM (1990) Disinhibition as a basic process in the expression of striatal functions. Trends Neurosci 13:277-80 [PubMed]
Chevalier G, Vacher S, Deniau JM, Desban M (1985) Disinhibition as a basic process in the expression of striatal functions. I. The striato-nigral influence on tecto-spinal/tecto-diencephalic neurons. Brain Res 334:215-26 [PubMed]
Contreras-Vidal JL, Stelmach GE (1995) A neural model of basal ganglia-thalamocortical relations in normal and parkinsonian movement. Biol Cybern 73:467-76 [PubMed]
Cooper AJ, Stanford IM (2000) Electrophysiological and morphological characteristics of three subtypes of rat globus pallidus neurone in vitro. J Physiol 527 Pt 2:291-304 [PubMed]
Cooper AJ, Stanford IM (2001) Dopamine D2 receptor mediated presynaptic inhibition of striatopallidal GABA(A) IPSCs in vitro. Neuropharmacology 41:62-71 [PubMed]
Cragg SJ, Baufreton J, Xue Y, Bolam JP, Bevan MD (2004) Synaptic release of dopamine in the subthalamic nucleus. Eur J Neurosci 20:1788-802 [Journal] [PubMed]
Dayan P, Abbott L (2001) Neural encoding: Firing rates and spike statistics Theoretical Neuroscience: Computational and Mathematical Modeling of Neural Systems
Deniau JM, Kitai ST, Donoghue JP, Grofova I (1982) Neuronal interactions in the substantia nigra pars reticulata through axon collaterals of the projection neurons. An electrophysiological and morphological study. Exp Brain Res 47:105-13 [PubMed]
Do MT, Bean BP (2003) Subthreshold sodium currents and pacemaking of subthalamic neurons: modulation by slow inactivation. Neuron 39:109-20 [PubMed]
Dommett E, Coizet V, Blaha CD, Martindale J, Lefebvre V, Walton N, Mayhew JE, Overton PG, Redgrave P (2005) How visual stimuli activate dopaminergic neurons at short latency. Science 307:1476-9 [Journal] [PubMed]
Falls WM, Park MR, Kitai ST (1983) An intracellular HRP study of the rat globus pallidus. II. Fine structural characteristics and synaptic connections of medially located large GP neurons. J Comp Neurol 221:229-45 [Journal] [PubMed]
Floran B, Floran L, Sierra A, Aceves J (1997) D2 receptor-mediated inhibition of GABA release by endogenous dopamine in the rat globus pallidus. Neurosci Lett 237:1-4 [PubMed]
Flores-Hernández J, Galarraga E, Bargas J (1997) Dopamine selects glutamatergic inputs to neostriatal neurons. Synapse 25:185-95 [Journal] [PubMed]
Frank MJ (2005) Dynamic dopamine modulation in the basal ganglia: a neurocomputational account of cognitive deficits in medicated and nonmedicated Parkinsonism. J Cogn Neurosci 17:51-72 [Journal] [PubMed]
  • Dynamic dopamine modulation in the basal ganglia: Learning in Parkinson (Frank et al 2004,2005) [Model]
Fujimoto K, Kita H (1993) Response characteristics of subthalamic neurons to the stimulation of the sensorimotor cortex in the rat. Brain Res 609:185-92 [PubMed]
Gerfen CR, Engber TM, Mahan LC, Susel Z, Chase TN, Monsma FJ, Sibley DR (1990) D1 and D2 dopamine receptor-regulated gene expression of striatonigral and striatopallidal neurons. Science 250:1429-32 [PubMed]
Gerfen CR, Wilson CJ (1996) The basal ganglia. Handbook of Chemical Neuroanatomy, Swanson LW:Et Al, ed. pp.371
Gerstner W (1999) Spiking neurons Pulsed Neural Networks, Mass W:Bishop CM, ed. pp.3
Gillies A, Arbuthnott G (2000) Computational models of the basal ganglia. Mov Disord 15:762-70 [PubMed]
Gillies A, Willshaw D, Li Z (2002) Subthalamic-pallidal interactions are critical in determining normal and abnormal functioning of the basal ganglia. Proc Biol Sci 269:545-51 [Journal] [PubMed]
Girard B, Cuzin V, Guillot A, Gurney KN, Prescott TJ (2003) A basal ganglia inspired model of action selection evaluated in a robotic survival task. J Integr Neurosci 2:179-200 [PubMed]
Glynn G, Ahmad SO (2002) Three-dimensional electrophysiological topography of the rat corticostriatal system. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 188:695-703 [Journal] [PubMed]
Gonon F (1997) Prolonged and extrasynaptic excitatory action of dopamine mediated by D1 receptors in the rat striatum in vivo. J Neurosci 17:5972-8 [PubMed]
Götz T, Kraushaar U, Geiger J, Lübke J, Berger T, Jonas P (1997) Functional properties of AMPA and NMDA receptors expressed in identified types of basal ganglia neurons. J Neurosci 17:204-15 [PubMed]
Grace AA (2002) Dopamine Neuropsychopharmacology: the fifth generation of progress, Davis KL:Charney D:Coyle JT:Nemeroff C, ed. pp.119
Graybiel AM (1995) Building action repertoires: memory and learning functions of the basal ganglia. Curr Opin Neurobiol 5:733-41 [PubMed]
Gruber AJ, Solla SA, Surmeier DJ, Houk JC (2003) Modulation of striatal single units by expected reward: a spiny neuron model displaying dopamine-induced bistability. J Neurophysiol 90:1095-114 [Journal] [PubMed]
  • Spiny neuron model with dopamine-induced bistability (Gruber et al 2003) [Model]
Gulley JM, Kosobud AE, Rebec GV (2002) Behavior-related modulation of substantia nigra pars reticulata neurons in rats performing a conditioned reinforcement task. Neuroscience 111:337-49 [PubMed]
Gulley JM, Kuwajima M, Mayhill E, Rebec GV (1999) Behavior-related changes in the activity of substantia nigra pars reticulata neurons in freely moving rats. Brain Res 845:68-76 [PubMed]
Gulley JM, Reed JL, Kuwajima M, Rebec GV (2004) Amphetamine-induced behavioral activation is associated with variable changes in basal ganglia output neurons recorded from awake, behaving rats. Brain Res 1012:108-18 [Journal] [PubMed]
Gurney K, Prescott TJ, Redgrave P (2001) A computational model of action selection in the basal ganglia. I. A new functional anatomy. Biol Cybern 84:401-10 [Journal] [PubMed]
  • Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004) [Model]
Gurney K, Prescott TJ, Redgrave P (2001) A computational model of action selection in the basal ganglia. II. Analysis and simulation of behaviour. Biol Cybern 84:411-23 [Journal] [PubMed]
  • A contracting model of the basal ganglia (Girard et al. 2008) [Model]
  • Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004) [Model]
Gurney K, Prescott TJ, Wickens JR, Redgrave P (2004) Computational models of the basal ganglia: from robots to membranes. Trends Neurosci 27:453-9 [Journal] [PubMed]
Gurney KN, Humphries M, Wood R, Prescott TJ, Redgrave P (2004) Testing computational hypotheses of brain systems function: a case study with the basal ganglia. Network 15:263-90 [Journal] [PubMed]
  • Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004) [Model]
Gurney KN, Humphries MD (2005) A spiking neuron model of basal ganglia for action selection can account for dopamine-modulated oscillatory phenomena Soc Neurosci Abstr 31:517.9
Haber SN (2003) The primate basal ganglia: parallel and integrative networks. J Chem Neuroanat 26:317-30 [PubMed]
Hallworth NE, Wilson CJ, Bevan MD (2003) Apamin-sensitive small conductance calcium-activated potassium channels, through their selective coupling to voltage-gated calcium channels, are critical determinants of the precision, pace, and pattern of action potential generation in rat subthalamic nucleus neurons in vitro. J Neurosci 23:7525-42 [PubMed]
Hanson JE, Smith Y, Jaeger D (2004) Sodium channels and dendritic spike initiation at excitatory synapses in globus pallidus neurons. J Neurosci 24:329-40 [Journal] [PubMed]
Hara K, Harris RA (2002) The anesthetic mechanism of urethane: the effects on neurotransmitter-gated ion channels. Anesth Analg 94:313-8, table of contents [PubMed]
Hernández-López S, Bargas J, Surmeier DJ, Reyes A, Galarraga E (1997) D1 receptor activation enhances evoked discharge in neostriatal medium spiny neurons by modulating an L-type Ca2+ conductance. J Neurosci 17:3334-42 [PubMed]
Hikosaka O, Takikawa Y, Kawagoe R (2000) Role of the basal ganglia in the control of purposive saccadic eye movements. Physiol Rev 80:953-78 [Journal] [PubMed]
Hoover BR, Marshall JF (2004) Molecular, chemical, and anatomical characterization of globus pallidus dopamine D2 receptor mRNA-containing neurons. Synapse 52:100-13 [Journal] [PubMed]
Houk JC (2005) Agents of the mind. Biol Cybern 92:427-37 [Journal] [PubMed]
Houk JC, Wise SP (1995) Distributed modular architectures linking basal ganglia, cerebellum, and cerebral cortex: their role in planning and controlling action. Cereb Cortex 5:95-110 [PubMed]
Humphries MD, Gurney K (2006) A means to an end: validating models byfitting experimental data Neurocomputing
Humphries MD, Gurney K, Stewart R, Prescott TJ, Redgrave P (2004) A spiking neuron model of basal ganglia demonstrating plausible selection and switching Eighth Meeting of the International Banglia Society, Crieff, UK
Humphries MD, Gurney KN (2002) The role of intra-thalamic and thalamocortical circuits in action selection. Network 13:131-56 [PubMed]
  • Basal ganglia-thalamocortical loop model of action selection (Humphries and Gurney 2002) [Model]
Humphries MD, Gurney KN (2003) A pulsed neural network model of bursting in the basal ganglia. Neural Netw 14:845-63
Hutchison WD, Dostrovsky JO, Walters JR, Courtemanche R, Boraud T, Goldberg J, Brown P (2004) Neuronal oscillations in the basal ganglia and movement disorders: evidence from whole animal and human recordings. J Neurosci 24:9240-3 [Journal] [PubMed]
Jarvis MR, Mitra PP (2001) Sampling properties of the spectrum and coherency of sequences of action potentials. Neural Comput 13:717-49 [PubMed]
Jiang ZG, North RA (1991) Membrane properties and synaptic responses of rat striatal neurones in vitro. J Physiol 443:533-53 [PubMed]
Joel D, Weiner I (2000) The connections of the dopaminergic system with the striatum in rats and primates: an analysis with respect to the functional and compartmental organization of the striatum. Neuroscience 96:451-74 [PubMed]
Johnson PI, Napier TC (1997) GABA- and glutamate-evoked responses in the rat ventral pallidum are modulated by dopamine. Eur J Neurosci 9:1397-406 [PubMed]
Kaneda K, Nambu A, Tokuno H, Takada M (2002) Differential processing patterns of motor information via striatopallidal and striatonigral projections. J Neurophysiol 88:1420-32 [Journal] [PubMed]
Kasanetz F, Riquelme LA, Murer MG (2002) Disruption of the two-state membrane potential of striatal neurones during cortical desynchronisation in anaesthetised rats. J Physiol 543:577-89 [PubMed]
Kirik D, Rosenblad C, Björklund A (1998) Characterization of behavioral and neurodegenerative changes following partial lesions of the nigrostriatal dopamine system induced by intrastriatal 6-hydroxydopamine in the rat. Exp Neurol 152:259-77 [Journal] [PubMed]
Kita H, Chang HT, Kitai ST (1983) The morphology of intracellularly labeled rat subthalamic neurons: a light microscopic analysis. J Comp Neurol 215:245-57 [Journal] [PubMed]
Kita H, Chang HT, Kitai ST (1983) Pallidal inputs to subthalamus: intracellular analysis. Brain Res 264:255-65 [PubMed]
Kita H, Kitai ST (1991) Intracellular study of rat globus pallidus neurons: membrane properties and responses to neostriatal, subthalamic and nigral stimulation. Brain Res 564:296-305 [PubMed]
Kita H, Kitai ST (1994) The morphology of globus pallidus projection neurons in the rat: an intracellular staining study. Brain Res 636:308-19 [PubMed]
Kita H, Nambu A, Kaneda K, Tachibana Y, Takada M (2004) Role of ionotropic glutamatergic and GABAergic inputs on the firing activity of neurons in the external pallidum in awake monkeys. J Neurophysiol 92:3069-84 [Journal] [PubMed]
Kreiss DS, Mastropietro CW, Rawji SS, Walters JR (1997) The response of subthalamic nucleus neurons to dopamine receptor stimulation in a rodent model of Parkinson's disease. J Neurosci 17:6807-19
Leblois A, Boraud T, Meissner W, Bergman H, Hansel D (2006) Competition between feedback loops underlies normal and pathological dynamics in the basal ganglia. J Neurosci 26:3567-83 [Journal] [PubMed]
  • A dynamical model of the basal ganglia (Leblois et al 2006) [Model]
Mackay WA (1997) Synchonized neuronal oscillations and their role in motor processes. Trends Cogn Sci 1:176-183
Magill PJ, Bolam JP, Bevan MD (2000) Relationship of activity in the subthalamic nucleus-globus pallidus network to cortical electroencephalogram. J Neurosci 20:820-33 [PubMed]
Magill PJ, Bolam JP, Bevan MD (2001) Dopamine regulates the impact of the cerebral cortex on the subthalamic nucleus-globus pallidus network. Neuroscience 106:313-30 [PubMed]
Magill PJ, Sharott A, Bevan MD, Brown P, Bolam JP (2004) Synchronous unit activity and local field potentials evoked in the subthalamic nucleus by cortical stimulation. J Neurophysiol 92:700-14 [Journal] [PubMed]
Magill PJ, Sharott A, Bolam JP, Brown P (2004) Brain state-dependency of coherent oscillatory activity in the cerebral cortex and basal ganglia of the rat. J Neurophysiol 92:2122-36 [Journal] [PubMed]
Mahon S, Deniau JM, Charpier S (2001) Relationship between EEG potentials and intracellular activity of striatal and cortico-striatal neurons: an in vivo study under different anesthetics. Cereb Cortex 11:360-73 [PubMed]
Mahon S, Deniau JM, Charpier S (2004) Corticostriatal plasticity: life after the depression. Trends Neurosci 27:460-7 [Journal] [PubMed]
Mahon S, Deniau JM, Charpier S (2006) Various synaptic activities and firing patterns in cortico-striatal and striatal neurons in vivo. J Physiol Paris 97:557-66
Mailly P, Charpier S, Menetrey A, Deniau JM (2003) Three-dimensional organization of the recurrent axon collateral network of the substantia nigra pars reticulata neurons in the rat. J Neurosci 23:5247-57 [PubMed]
Manwani A, Koch C (1999) Detecting and estimating signals in noisy cable structure, I: neuronal noise sources. Neural Comput 11:1797-829 [PubMed]
Maurice N, Deniau JM, Menetrey A, Glowinski J, Thierry AM (1997) Position of the ventral pallidum in the rat prefrontal cortex-basal ganglia circuit. Neuroscience 80:523-34 [PubMed]
Middleton FA, Strick PL (2000) Basal ganglia and cerebellar loops: motor and cognitive circuits. Brain Res Brain Res Rev 31:236-50 [PubMed]
Mink JW, Thach WT (1993) Basal ganglia intrinsic circuits and their role in behavior. Curr Opin Neurobiol 3:950-7 [PubMed]
Morris G, Nevet A, Bergman H (2006) Anatomical funneling, sparse connectivity and redundancy reduction in the neural networks of the basal ganglia. J Physiol Paris 97:581-9
Nakanishi H, Kita H, Kitai ST (1987) Intracellular study of rat substantia nigra pars reticulata neurons in an in vitro slice preparation: electrical membrane properties and response characteristics to subthalamic stimulation. Brain Res 437:45-55
Nakanishi H, Kita H, Kitai ST (1991) Intracellular study of rat entopeduncular nucleus neurons in an in vitro slice preparation: response to subthalamic stimulation. Brain Res 549:285-91 [PubMed]
Nakanishi H, Tamura A, Kawai K, Yamamoto K (1997) Electrophysiological studies of rat substantia nigra neurons in an in vitro slice preparation after middle cerebral artery occlusion. Neuroscience 77:1021-8 [PubMed]
Nambu A, Llinas R (1994) Electrophysiology of globus pallidus neurons in vitro. J Neurophysiol 72:1127-39 [Journal] [PubMed]
Nambu A, Tokuno H, Takada M (2002) Functional significance of the cortico-subthalamo-pallidal 'hyperdirect' pathway. Neurosci Res 43:111-7 [PubMed]
Nawrot M, Aertsen A, Rotter S (1999) Single-trial estimation of neuronal firing rates: from single-neuron spike trains to population activity. J Neurosci Methods 94:81-92 [PubMed]
Nicola SM, Hopf FW, Hjelmstad GO (2004) Contrast enhancement: a physiological effect of striatal dopamine? Cell Tissue Res 318:93-106 [Journal] [PubMed]
Nicola SM, Surmeier J, Malenka RC (2000) Dopaminergic modulation of neuronal excitability in the striatum and nucleus accumbens. Annu Rev Neurosci 23:185-215 [Journal] [PubMed]
Nisenbaum ES, Wilson CJ (1995) Potassium currents responsible for inward and outward rectification in rat neostriatal spiny projection neurons. J Neurosci 15:4449-63 [PubMed]
O'Connor WT (1998) Functional neuroanatomy of the basal ganglia as studied by dual-probe microdialysis. Nucl Med Biol 25:743-6 [PubMed]
Olsson M, Nikkhah G, Bentlage C, Björklund A (1995) Forelimb akinesia in the rat Parkinson model: differential effects of dopamine agonists and nigral transplants as assessed by a new stepping test. J Neurosci 15:3863-75 [PubMed]
Oorschot DE (1996) Total number of neurons in the neostriatal, pallidal, subthalamic, and substantia nigral nuclei of the rat basal ganglia: a stereological study using the cavalieri and optical disector methods. J Comp Neurol 366:580-99 [Journal] [PubMed]
Otsuka T, Murakami F, Song WJ (2001) Excitatory postsynaptic potentials trigger a plateau potential in rat subthalamic neurons at hyperpolarized states. J Neurophysiol 86:1816-25 [Journal] [PubMed]
Overton PG, Greenfield SA (1995) Determinants of neuronal firing pattern in the guinea-pig subthalamic nucleus: an in vivo and in vitro comparison. J Neural Transm Park Dis Dement Sect 10:41-54 [PubMed]
Parent A, Hazrati LN (1995) Functional anatomy of the basal ganglia. II. The place of subthalamic nucleus and external pallidum in basal ganglia circuitry. Brain Res Brain Res Rev 20:128-54 [PubMed]
Paz JT, Deniau JM, Charpier S (2005) Rhythmic bursting in the cortico-subthalamo-pallidal network during spontaneous genetically determined spike and wave discharges. J Neurosci 25:2092-101 [Journal] [PubMed]
Phillips JM, Brown VJ (1999) Reaction time performance following unilateral striatal dopamine depletion and lesions of the subthalamic nucleus in the rat. Eur J Neurosci 11:1003-10 [PubMed]
Plenz D, Kital ST (1999) A basal ganglia pacemaker formed by the subthalamic nucleus and external globus pallidus. Nature 400:677-82 [Journal] [PubMed]
Prescott TJ, Redgrave P, Gurney K (1999) Layered control architectures in robots and vertebrates Adapt Beh 7:99-127
Querejeta E, Delgado A, Valdiosera R, Erlij D, Aceves J (2001) Intrapallidal D2 dopamine receptors control globus pallidus neuron activity in the rat. Neurosci Lett 300:79-82 [PubMed]
Raz A, Vaadia E, Bergman H (2000) Firing patterns and correlations of spontaneous discharge of pallidal neurons in the normal and the tremulous 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine vervet model of parkinsonism. J Neurosci 20:8559-71 [PubMed]
Redgrave P, Prescott TJ, Gurney K (1999) The basal ganglia: a vertebrate solution to the selection problem? Neuroscience 89:1009-23 [PubMed]
Rick CE, Lacey MG (1994) Rat substantia nigra pars reticulata neurones are tonically inhibited via GABAA, but not GABAB, receptors in vitro. Brain Res 659:133-7 [PubMed]
Romanelli P, Esposito V, Schaal DW, Heit G (2005) Somatotopy in the basal ganglia: experimental and clinical evidence for segregated sensorimotor channels. Brain Res Brain Res Rev 48:112-28 [Journal] [PubMed]
Rubchinsky LL, Kopell N, Sigvardt KA (2003) Modeling facilitation and inhibition of competing motor programs in basal ganglia subthalamic nucleus-pallidal circuits. Proc Natl Acad Sci U S A 100:14427-32 [Journal] [PubMed]
Sadek AR, Magill PJ, Bolam JP (2005) Local connectivity between neurons of the rat globus pallidus The basal ganglia VIII, Bolan JP:Ingham CA:Magill PJ, ed. pp.611
Sandstrom MI, Rebec GV (2003) Characterization of striatal activity in conscious rats: contribution of NMDA and AMPA/kainate receptors to both spontaneous and glutamate-driven firing. Synapse 47:91-100 [Journal] [PubMed]
Sano H, Yasoshima Y, Matsushita N, Kaneko T, Kohno K, Pastan I, Kobayashi K (2003) Conditional ablation of striatal neuronal types containing dopamine D2 receptor disturbs coordination of basal ganglia function. J Neurosci 23:9078-88 [PubMed]
Scargle JD (1982) Studies in astonomical time series analysis. II. Statistical aspects of spectral analysis of unevenly spaced data Astrophys J 263:835-853
Schultz W (1998) Predictive reward signal of dopamine neurons. J Neurophysiol 80:1-27 [Journal] [PubMed]
Segev I (1995) Dendritic processing Brain Theory And Neural Networks, Arbib MA, ed. pp.282
Shen KZ, Johnson SW (2000) Presynaptic dopamine D2 and muscarine M3 receptors inhibit excitatory and inhibitory transmission to rat subthalamic neurones in vitro. J Physiol 525 Pt 2:331-41 [PubMed]
Shepherd GM, Brayton RK (1987) Logic operations are properties of computer-simulated interactions between excitable dendritic spines. Neuroscience 21:151-65 [PubMed]
Shink E, Bevan MD, Bolam JP, Smith Y (1996) The subthalamic nucleus and the external pallidum: two tightly interconnected structures that control the output of the basal ganglia in the monkey. Neuroscience 73:335-57 [PubMed]
Smith Y, Bevan MD, Shink E, Bolam JP (1998) Microcircuitry of the direct and indirect pathways of the basal ganglia. Neuroscience 86:353-87 [PubMed]
Smith Y, Bolam JP (1989) Neurons of the substantia nigra reticulata receive a dense GABA-containing input from the globus pallidus in the rat. Brain Res 493:160-7 [PubMed]
Smith Y, Raju DV, Pare JF, Sidibe M (2004) The thalamostriatal system: a highly specific network of the basal ganglia circuitry. Trends Neurosci 27:520-7 [Journal] [PubMed]
Somogyi P, Hodgson AJ, Smith AD (1979) An approach to tracing neuron networks in the cerebral cortex and basal ganglia. Combination of Golgi staining, retrograde transport of horseradish peroxidase and anterograde degeneration of synaptic boutons in the same material. Neuroscience 4:1805-52 [PubMed]
Song WJ, Baba Y, Otsuka T, Murakami F (2000) Characterization of Ca(2+) channels in rat subthalamic nucleus neurons. J Neurophysiol 84:2630-7 [Journal] [PubMed]
Spirduso WW, Gilliam PE, Schallert T, Upchurch M, Vaughn DM, Wilcox RE (1985) Reactive capacity: a sensitive behavioral marker of movement initiation and nigrostriatal dopamine function. Brain Res 335:45-54 [PubMed]
Stanford IM (2003) Independent neuronal oscillators of the rat globus pallidus. J Neurophysiol 89:1713-7 [Journal] [PubMed]
Steriade M, Nuñez A, Amzica F (1993) A novel slow (< 1 Hz) oscillation of neocortical neurons in vivo: depolarizing and hyperpolarizing components. J Neurosci 13:3252-65 [PubMed]
Steriade M, Timofeev I, Grenier F (2001) Natural waking and sleep states: a view from inside neocortical neurons. J Neurophysiol 85:1969-85 [Journal] [PubMed]
Stern EA, Kincaid AE, Wilson CJ (1997) Spontaneous subthreshold membrane potential fluctuations and action potential variability of rat corticostriatal and striatal neurons in vivo. J Neurophysiol 77:1697-715 [Journal] [PubMed]
Surmeier DJ, Mercer JN, Chan CS (2005) Autonomous pacemakers in the basal ganglia: who needs excitatory synapses anyway? Curr Opin Neurobiol 15:312-8 [Journal] [PubMed]
Surmeier DJ, Song WJ, Yan Z (1996) Coordinated expression of dopamine receptors in neostriatal medium spiny neurons. J Neurosci 16:6579-91 [PubMed]
Temel Y, Blokland A, Steinbusch HW, Visser-Vandewalle V (2005) The functional role of the subthalamic nucleus in cognitive and limbic circuits. Prog Neurobiol 76:393-413 [Journal] [PubMed]
Tepper JM, Koós T, Wilson CJ (2004) GABAergic microcircuits in the neostriatum. Trends Neurosci 27:662-9 [Journal] [PubMed]
Ulrich D (2003) Differential arithmetic of shunting inhibition for voltage and spike rate in neocortical pyramidal cells. Eur J Neurosci 18:2159-65 [PubMed]
Venance L, Glowinski J, Giaume C (2004) Electrical and chemical transmission between striatal GABAergic output neurones in rat brain slices. J Physiol 559:215-30 [Journal] [PubMed]
von Krosigk M, Smith Y, Bolam JP, Smith AD (1992) Synaptic organization of GABAergic inputs from the striatum and the globus pallidus onto neurons in the substantia nigra and retrorubral field which project to the medullary reticular formation. Neuroscience 50:531-49 [PubMed]
Wang Z, Rebec GV (1993) Neuronal and behavioral correlates of intrastriatal infusions of amphetamine in freely moving rats. Brain Res 627:79-88 [PubMed]
Waszczak BL, Martin L, Boucher N, Zahr N, Sikes RW, Stellar JR (2001) Electrophysiological and behavioral output of the rat basal ganglia after intrastriatal infusion of d-amphetamine: lack of support for the basal ganglia model. Brain Res 920:170-82 [PubMed]
Waszczak BL, Martin LP, Finlay HE, Zahr N, Stellar JR (2002) Effects of individual and concurrent stimulation of striatal D1 and D2 dopamine receptors on electrophysiological and behavioral output from rat basal ganglia. J Pharmacol Exp Ther 300:850-61 [PubMed]
West AR, Grace AA (2002) Opposite influences of endogenous dopamine D1 and D2 receptor activation on activity states and electrophysiological properties of striatal neurons: studies combining in vivo intracellular recordings and reverse microdialysis. J Neurosci 22:294-304 [PubMed]
Williams MN, Faull RL (1985) The striatonigral projection and nigrotectal neurons in the rat. A correlated light and electron microscopic study demonstrating a monosynaptic striatal input to identified nigrotectal neurons using a combined degeneration and horseradish peroxidase procedure. Neuroscience 14:991-1010
Wilson CJ, Kawaguchi Y (1996) The origins of two-state spontaneous membrane potential fluctuations of neostriatal spiny neurons. J Neurosci 16:2397-410 [PubMed]
Wilson CL, Puntis M, Lacey MG (2004) Overwhelmingly asynchronous firing of rat subthalamic nucleus neurones in brain slices provides little evidence for intrinsic interconnectivity. Neuroscience 123:187-200 [PubMed]
Windels F, Kiyatkin EA (2004) GABA, not glutamate, controls the activity of substantia nigra reticulata neurons in awake, unrestrained rats. J Neurosci 24:6751-4
Baladron J, Nambu A, Hamker FH (2019) The subthalamic nucleus-external globus pallidus loop biases exploratory decisions towards known alternatives: a neuro-computational study. Eur J Neurosci 49:754-767 [Journal] [PubMed]
Bogacz R, Gurney K (2007) The basal ganglia and cortex implement optimal decision making between alternative actions. Neural Comput 19:442-77 [Journal] [PubMed]
Fountas Z, Shanahan M (2017) The role of cortical oscillations in a spiking neural network model of the basal ganglia. PLoS One 12:e0189109 [Journal] [PubMed]
  • Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017) [Model]
Frank MJ, Samanta J, Moustafa AA, Sherman SJ (2007) Hold your horses: impulsivity, deep brain stimulation, and medication in parkinsonism. Science 318:1309-12 [Journal] [PubMed]
  • Roles of subthalamic nucleus and DBS in reinforcement conflict-based decision making (Frank 2006) [Model]
Gurney KN, Humphries MD, Redgrave P (2015) A new framework for cortico-striatal plasticity: behavioural theory meets in vitro data at the reinforcement-action interface. PLoS Biol 13:e1002034 [Journal] [PubMed]
  • Cortico-striatal plasticity in medium spiny neurons (Gurney et al 2015) [Model]
Hahn PJ, McIntyre CC (2010) Modeling shifts in the rate and pattern of subthalamopallidal network activity during deep brain stimulation. J Comput Neurosci 28:425-41 [Journal] [PubMed]
  • Basal ganglia network model of subthalamic deep brain stimulation (Hahn and McIntyre 2010) [Model]
Humphries MD, Wood R, Gurney K (2009) Dopamine-modulated dynamic cell assemblies generated by the GABAergic striatal microcircuit. Neural Netw 22:1174-88 [Journal] [PubMed]
  • Striatal GABAergic microcircuit, dopamine-modulated cell assemblies (Humphries et al. 2009) [Model]
Kato A, Morita K (2016) Forgetting in Reinforcement Learning Links Sustained Dopamine Signals to Motivation. PLoS Comput Biol 12:e1005145 [Journal] [PubMed]
  • Reinforcement Learning with Forgetting: Linking Sustained Dopamine to Motivation (Kato Morita 2016) [Model]
Kerr CC, Van Albada SJ, Neymotin SA, Chadderdon GL, Robinson PA, Lytton WW (2013) Cortical information flow in Parkinson's disease: a composite network/field model. Front Comput Neurosci 7:39 [Journal] [PubMed]
  • Composite spiking network/neural field model of Parkinsons (Kerr et al 2013) [Model]
Lindroos R, Dorst MC, Du K, Filipovic M, Keller D, Ketzef M, Kozlov AK, Kumar A, Lindahl M, Nair AG, Pérez-Fernández J, Grillner S, Silberberg G, Hellgren Kotaleski J (2018) Basal Ganglia Neuromodulation Over Multiple Temporal and Structural Scales-Simulations of Direct Pathway MSNs Investigate the Fast Onset of Dopaminergic Effects and Predict the Role of Kv4.2. Front Neural Circuits 12:3 [Journal] [PubMed]
  • Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018) [Model]
Muddapu VR, Mandali A, Chakravarthy VS, Ramaswamy S (2019) A Computational Model of Loss of Dopaminergic Cells in Parkinson's Disease Due to Glutamate-Induced Excitotoxicity. Front Neural Circuits 13:11 [Journal] [PubMed]
  • Excitotoxic loss of dopaminergic cells in PD (Muddapu et al 2019) [Model]
Mulcahy G, Atwood B, Kuznetsov A (2020) Basal ganglia role in learning rewarded actions and executing previously learned choices: Healthy and diseased states. PLoS One 15:e0228081 [Journal] [PubMed]
  • Cortico - Basal Ganglia Loop (Mulcahy et al 2020) [Model]
Pavlides A, Hogan SJ, Bogacz R (2015) Computational Models Describing Possible Mechanisms for Generation of Excessive Beta Oscillations in Parkinson's Disease. PLoS Comput Biol 11:e1004609 [Journal] [PubMed]
  • Excessive beta oscillations in Parkinson's disease (Pavlides et al. 2015) [Model]
Pirini M, Rocchi L, Sensi M, Chiari L (2009) A computational modelling approach to investigate different targets in deep brain stimulation for Parkinson's disease. J Comput Neurosci 26:91-107 [Journal] [PubMed]
  • Investigation of different targets in deep brain stimulation for Parkinson`s (Pirini et al. 2009) [Model]
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