Citation Relationships

Legends: Link to a Model Reference cited by multiple papers

Melozzi F, Woodman MM, Jirsa VK, Bernard C (2017) The Virtual Mouse Brain: A Computational Neuroinformatics Platform to Study Whole Mouse Brain Dynamics eNeuro

   The Virtual Mouse Brain (TVMB) (Melozzi et al. 2017)

References and models cited by this paper

References and models that cite this paper

Allen EA, Damaraju E, Plis SM, Erhardt EB, Eichele T, Calhoun VD (2014) Tracking whole-brain connectivity dynamics in the resting state. Cereb Cortex 24:663-76 [Journal] [PubMed]
Brette R, Gerstner W (2005) Adaptive exponential integrate-and-fire model as an effective description of neuronal activity. J Neurophysiol 94:3637-42 [Journal] [PubMed]
   Adaptive exponential integrate-and-fire model (Brette & Gerstner 2005) [Model]
Buckner RL, Sepulcre J, Talukdar T, Krienen FM, Liu H, Hedden T, Andrews-Hanna JR, Sperling RA, Johnson KA (2009) Cortical hubs revealed by intrinsic functional connectivity: mapping, assessment of stability, and relation to Alzheimer's disease. J Neurosci 29:1860-73 [Journal] [PubMed]
Calabrese E, Badea A, Cofer G, Qi Y, Johnson GA (2015) A Diffusion MRI Tractography Connectome of the Mouse Brain and Comparison with Neuronal Tracer Data. Cereb Cortex 25:4628-37 [Journal] [PubMed]
Centeno M, Carmichael DW (2014) Network Connectivity in Epilepsy: Resting State fMRI and EEG-fMRI Contributions. Front Neurol 5:93 [Journal] [PubMed]
Chang C, Glover GH (2010) Time-frequency dynamics of resting-state brain connectivity measured with fMRI. Neuroimage 50:81-98 [Journal] [PubMed]
Chen S, Buckmaster PS (2005) Stereological analysis of forebrain regions in kainate-treated epileptic rats. Brain Res 1057:141-52 [Journal] [PubMed]
Crossley NA, Mechelli A, Scott J, Carletti F, Fox PT, McGuire P, Bullmore ET (2014) The hubs of the human connectome are generally implicated in the anatomy of brain disorders. Brain 137:2382-95 [Journal] [PubMed]
Deco G, Jirsa VK (2012) Ongoing cortical activity at rest: criticality, multistability, and ghost attractors. J Neurosci 32:3366-75 [Journal] [PubMed]
Deco G, Jirsa VK, McIntosh AR (2013) Resting brains never rest: computational insights into potential cognitive architectures. Trends Neurosci 36:268-74 [Journal] [PubMed]
Deco G, Kringelbach ML, Jirsa VK, Ritter P (2017) The dynamics of resting fluctuations in the brain: metastability and its dynamical cortical core. Sci Rep 7:3095 [Journal] [PubMed]
Deco G, Ponce-Alvarez A, Mantini D, Romani GL, Hagmann P, Corbetta M (2013) Resting-state functional connectivity emerges from structurally and dynamically shaped slow linear fluctuations. J Neurosci 33:11239-52 [Journal] [PubMed]
Diesmann M, Gewaltig MO (2002) NEST: An environment for neural systemssimulations Forschung und wisschenschaftliches Rechnen, Plesser T:Macho V, ed. pp.43
Esclapez M, Hirsch JC, Ben-Ari Y, Bernard C (1999) Newly formed excitatory pathways provide a substrate for hyperexcitability in experimental temporal lobe epilepsy. J Comp Neurol 408:449-60 [PubMed]
Friston KJ, Mechelli A, Turner R, Price CJ (2000) Nonlinear responses in fMRI: the Balloon model, Volterra kernels, and other hemodynamics. Neuroimage 12:466-77 [Journal] [PubMed]
Golos M, Jirsa V, Daucé E (2015) Multistability in Large Scale Models of Brain Activity. PLoS Comput Biol 11:e1004644 [Journal] [PubMed]
Goodman DF, Brette R (2009) The brian simulator. Front Neurosci 3:192-7 [Journal] [PubMed]
Hansen EC, Battaglia D, Spiegler A, Deco G, Jirsa VK (2015) Functional connectivity dynamics: modeling the switching behavior of the resting state. Neuroimage 105:525-35 [Journal] [PubMed]
Hines ML, Carnevale NT (1997) The NEURON simulation environment. Neural Comput 9:1179-209 [PubMed]
Izhikevich EM (2003) Simple model of spiking neurons. IEEE Trans Neural Netw 14:1569-72 [Journal] [PubMed]
   Artificial neuron model (Izhikevich 2003, 2004, 2007) [Model]
Jirsa VK (2009) Neural field dynamics with local and global connectivity and time delay. Philos Trans A Math Phys Eng Sci 367:1131-43 [Journal] [PubMed]
Jirsa VK, Proix T, Perdikis D, Woodman MM, Wang H, Gonzalez-Martinez J, Bernard C, Bénar C, Guye M, Chauvel P, Bartolomei F (2017) The Virtual Epileptic Patient: Individualized whole-brain models of epilepsy spread. Neuroimage 145:377-388 [Journal] [PubMed]
Jirsa VK, Stacey WC, Quilichini PP, Ivanov AI, Bernard C (2014) On the nature of seizure dynamics. Brain 137:2210-30 [Journal] [PubMed]
Keilholz SD, Magnuson ME, Pan WJ, Willis M, Thompson GJ (2013) Dynamic properties of functional connectivity in the rodent. Brain Connect 3:31-40 [Journal] [PubMed]
Leonardi N, Van De Ville D (2015) On spurious and real fluctuations of dynamic functional connectivity during rest. Neuroimage 104:430-6 [Journal] [PubMed]
Liang Z, Liu X, Zhang N (2015) Dynamic resting state functional connectivity in awake and anesthetized rodents. Neuroimage 104:89-99 [Journal] [PubMed]
Liska A, Galbusera A, Schwarz AJ, Gozzi A (2015) Functional connectivity hubs of the mouse brain. Neuroimage 115:281-91 [Journal] [PubMed]
Markram H (2012) The human brain project. Sci Am 306:50-5 [PubMed]
Mechling AE, Hübner NS, Lee HL, Hennig J, von Elverfeldt D, Harsan LA (2014) Fine-grained mapping of mouse brain functional connectivity with resting-state fMRI. Neuroimage 96:203-15 [Journal] [PubMed]
Newman ME (2008) The mathematics of networks The New Palgrave Encyclopedia of Economics 2:1-12
Preti MG, Bolton TA, Van De Ville D (2017) The dynamic functional connectome: State-of-the-art and perspectives. Neuroimage 160:41-54 [Journal] [PubMed]
Proix T, Bartolomei F, Chauvel P, Bernard C, Jirsa VK (2014) Permittivity coupling across brain regions determines seizure recruitment in partial epilepsy. J Neurosci 34:15009-21 [Journal] [PubMed]
Proix T, Bartolomei F, Guye M, Jirsa VK (2017) Individual brain structure and modelling predict seizure propagation. Brain 140:641-654 [Journal] [PubMed]
Sanz Leon P, Knock SA, Woodman MM, Domide L, Mersmann J, McIntosh AR, Jirsa V (2013) The Virtual Brain: a simulator of primate brain network dynamics. Front Neuroinform 7:10 [Journal] [PubMed]
Sanz-Leon P, Knock SA, Spiegler A, Jirsa VK (2015) Mathematical framework for large-scale brain network modeling in The Virtual Brain. Neuroimage 111:385-430 [Journal] [PubMed]
Sinha N, Dauwels J, Kaiser M, Cash SS, Brandon Westover M, Wang Y, Taylor PN (2017) Predicting neurosurgical outcomes in focal epilepsy patients using computational modelling. Brain 140:319-332 [Journal] [PubMed]
Spiegler A, Hansen EC, Bernard C, McIntosh AR, Jirsa VK (2016) Selective Activation of Resting-State Networks following Focal Stimulation in a Connectome-Based Network Model of the Human Brain. eNeuro [Journal] [PubMed]
Stafford JM, Jarrett BR, Miranda-Dominguez O, Mills BD, Cain N, Mihalas S, Lahvis GP, Lattal KM, Mitchell SH, David SV, Fryer JD, Nigg JT, Fair DA (2014) Large-scale topology and the default mode network in the mouse connectome. Proc Natl Acad Sci U S A 111:18745-50 [Journal] [PubMed]
Toga AW, Thompson PM (2003) Mapping brain asymmetry. Nat Rev Neurosci 4:37-48 [Journal] [PubMed]
Toyoda I, Bower MR, Leyva F, Buckmaster PS (2013) Early activation of ventral hippocampus and subiculum during spontaneous seizures in a rat model of temporal lobe epilepsy. J Neurosci 33:11100-15 [Journal] [PubMed]
van den Heuvel MP, Sporns O (2013) Network hubs in the human brain. Trends Cogn Sci 17:683-96 [Journal] [PubMed]
Von Luxburg U (2007) A tutorial on spectral clustering Stat Comput 17:395-416 [Journal]
Wong KF, Wang XJ (2006) A recurrent network mechanism of time integration in perceptual decisions. J Neurosci 26:1314-28 [Journal] [PubMed]
(46 refs)