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Linaro D, Ocker GK, Doiron B, Giugliano M (2019) Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro. J Neurosci 39:7648-7663 [PubMed]

  • L5 cortical neurons with recreated synaptic inputs in vitro correlation transfer (Linaro et al 2019)

References and models cited by this paper

References and models that cite this paper

Badel L, Lefort S, Brette R, Petersen CC, Gerstner W, Richardson MJ (2008) Dynamic I-V curves are reliable predictors of naturalistic pyramidal-neuron voltage traces. J Neurophysiol 99:656-66 [Journal] [PubMed]
Bair W, Zohary E, Newsome WT (2001) Correlated firing in macaque visual area MT: time scales and relationship to behavior. J Neurosci 21:1676-97 [PubMed]
Barreiro AK, Shea-Brown E, Thilo EL (2010) Time scales of spike-train correlation for neural oscillators with common drive. Phys Rev E Stat Nonlin Soft Matter Phys 81:011916 [Journal] [PubMed]
Bos H, Diesmann M, Helias M (2016) Identifying Anatomical Origins of Coexisting Oscillations in the Cortical Microcircuit. PLoS Comput Biol 12:e1005132 [Journal] [PubMed]
Brette R, Gerstner W (2005) Adaptive exponential integrate-and-fire model as an effective description of neuronal activity. J Neurophysiol 94:3637-42 [Journal] [PubMed]
  • Adaptive exponential integrate-and-fire model (Brette & Gerstner 2005) [Model]
Brunel N, Chance FS, Fourcaud N, Abbott LF (2001) Effects of synaptic noise and filtering on the frequency response of spiking neurons. Phys Rev Lett 86:2186-9 [Journal] [PubMed]
Buzsáki G, Mizuseki K (2014) The log-dynamic brain: how skewed distributions affect network operations. Nat Rev Neurosci 15:264-78 [Journal] [PubMed]
Chance FS, Abbott LF, Reyes AD (2002) Gain modulation from background synaptic input. Neuron 35:773-82 [PubMed]
Cohen MR, Kohn A (2011) Measuring and interpreting neuronal correlations. Nat Neurosci 14:811-9 [Journal] [PubMed]
Connors BW, Gutnick MJ (1990) Intrinsic firing patterns of diverse neocortical neurons. Trends Neurosci 13:99-104 [PubMed]
Cox D, Miller H (1965) The Theory of Stochastic Processes
Cox DR, Isham V (1980) Point Processes
Dayan P, Abbott LF (2001) Theoretical Neuroscience. Computational and Mathematical Modeling of Neural Systems
de la Rocha J, Doiron B, Shea-Brown E, Josic K, Reyes A (2007) Correlation between neural spike trains increases with firing rate. Nature 448:802-6 [Journal] [PubMed]
deCharms RC, Merzenich MM (1996) Primary cortical representation of sounds by the coordination of action-potential timing. Nature 381:610-3 [Journal] [PubMed]
Deger M, Schwalger T, Naud R, Gerstner W (2014) Fluctuations and information filtering in coupled populations of spiking neurons with adaptation. Phys Rev E Stat Nonlin Soft Matter Phys 90:062704 [Journal] [PubMed]
Destexhe A, Bal T (2009) Dynamic-Clamp from Principles to Applications, Destexhe A:Bal T, ed.
Destexhe A, Paré D (1999) Impact of network activity on the integrative properties of neocortical pyramidal neurons in vivo. J Neurophysiol 81:1531-47 [Journal] [PubMed]
  • NN activity impact on neocortical pyr. neurons integrative properties in vivo (Destexhe & Pare 1999) [Model]
Destexhe A, Rudolph M, Paré D (2003) The high-conductance state of neocortical neurons in vivo. Nat Rev Neurosci 4:739-51 [Journal] [PubMed]
Doiron B, Litwin-Kumar A, Rosenbaum R, Ocker GK, Josic K (2016) The mechanics of state-dependent neural correlations. Nat Neurosci 19:383-93 [Journal] [PubMed]
Druckmann S, Banitt Y, Gidon A, Schürmann F, Markram H, Segev I (2007) A novel multiple objective optimization framework for constraining conductance-based neuron models by experimental data. Front Neurosci 1:7-18 [Journal] [PubMed]
Erisken S, Vaiceliunaite A, Jurjut O, Fiorini M, Katzner S, Busse L (2014) Effects of locomotion extend throughout the mouse early visual system. Curr Biol 24:2899-907 [Journal] [PubMed]
Fourcaud N, Brunel N (2002) Dynamics of the firing probability of noisy integrate-and-fire neurons. Neural Comput 14:2057-110 [Journal] [PubMed]
Freund TF, Katona I (2007) Perisomatic inhibition. Neuron 56:33-42 [Journal] [PubMed]
Garcia Del Molino LC, Yang GR, Mejias JF, Wang XJ (2017) Paradoxical response reversal of top-down modulation in cortical circuits with three interneuron types. Elife [Journal] [PubMed]
Gentet LJ, Avermann M, Matyas F, Staiger JF, Petersen CC (2010) Membrane potential dynamics of GABAergic neurons in the barrel cortex of behaving mice. Neuron 65:422-35 [Journal] [PubMed]
Gentet LJ, Kremer Y, Taniguchi H, Huang ZJ, Staiger JF, Petersen CC (2012) Unique functional properties of somatostatin-expressing GABAergic neurons in mouse barrel cortex. Nat Neurosci 15:607-12 [Journal] [PubMed]
Goldberg JH, Lacefield CO, Yuste R (2004) Global dendritic calcium spikes in mouse layer 5 low threshold spiking interneurones: implications for control of pyramidal cell bursting. J Physiol 558:465-78 [Journal] [PubMed]
Harnett MT, Magee JC, Williams SR (2015) Distribution and function of HCN channels in the apical dendritic tuft of neocortical pyramidal neurons. J Neurosci 35:1024-37 [Journal] [PubMed]
Harnett MT, Makara JK, Spruston N, Kath WL, Magee JC (2012) Synaptic amplification by dendritic spines enhances input cooperativity. Nature 491:599-602 [Journal] [PubMed]
Hengen KB, Lambo ME, Van Hooser SD, Katz DB, Turrigiano GG (2013) Firing rate homeostasis in visual cortex of freely behaving rodents. Neuron 80:335-42 [Journal] [PubMed]
Henze DA, Buzsáki G (2001) Action potential threshold of hippocampal pyramidal cells in vivo is increased by recent spiking activity. Neuroscience 105:121-30 [PubMed]
Higgs MH, Spain WJ (2009) Conditional bursting enhances resonant firing in neocortical layer 2-3 pyramidal neurons. J Neurosci 29:1285-99 [Journal] [PubMed]
Holden AV (1976) Models of the Stochastic Activity of Neurones
Hong S, Ratté S, Prescott SA, De Schutter E (2012) Single neuron firing properties impact correlation-based population coding. J Neurosci 32:1413-28 [Journal] [PubMed]
  • A model for how correlation depends on the neuronal excitability type (Hong et al. 2012) [Model]
Ilin V, Malyshev A, Wolf F, Volgushev M (2013) Fast computations in cortical ensembles require rapid initiation of action potentials. J Neurosci 33:2281-92 [Journal] [PubMed]
Jiang X, Shen S, Cadwell CR, Berens P, Sinz F, Ecker AS, Patel S, Tolias AS (2015) Principles of connectivity among morphologically defined cell types in adult neocortex. Science 350:aac9462 [Journal] [PubMed]
Karnani MM, Agetsuma M, Yuste R (2014) A blanket of inhibition: functional inferences from dense inhibitory connectivity. Curr Opin Neurobiol 26:96-102 [Journal] [PubMed]
Kawaguchi Y, Kondo S (2002) Parvalbumin, somatostatin and cholecystokinin as chemical markers for specific GABAergic interneuron types in the rat frontal cortex. J Neurocytol 31:277-87 [PubMed]
Kole MH, Stuart GJ (2008) Is action potential threshold lowest in the axon? Nat Neurosci 11:1253-5 [Journal] [PubMed]
Köndgen H, Geisler C, Fusi S, Wang XJ, Lüscher HR, Giugliano M (2008) The dynamical response properties of neocortical neurons to temporally modulated noisy inputs in vitro. Cereb Cortex 18:2086-97 [Journal] [PubMed]
  • Response properties of neocort. neurons to temporally modulated noisy inputs (Koendgen et al. 2008) [Model]
König P, Engel AK, Singer W (1996) Integrator or coincidence detector? The role of the cortical neuron revisited. Trends Neurosci 19:130-7 [PubMed]
Lee AT, Vogt D, Rubenstein JL, Sohal VS (2014) A class of GABAergic neurons in the prefrontal cortex sends long-range projections to the nucleus accumbens and elicits acute avoidance behavior. J Neurosci 34:11519-25 [Journal] [PubMed]
Linaro D, Biró I, Giugliano M (2018) Dynamical response properties of neocortical neurons to conductance-driven time-varying inputs. Eur J Neurosci 47:17-32 [Journal] [PubMed]
Linaro D, Couto J, Giugliano M (2014) Command-line cellular electrophysiology for conventional and real-time closed-loop experiments. J Neurosci Methods 230:5-19 [Journal] [PubMed]
  • Phase response curves firing rate dependency of rat purkinje neurons in vitro (Couto et al 2015) [Model]
Litwin-Kumar A, Oswald AM, Urban NN, Doiron B (2011) Balanced synaptic input shapes the correlation between neural spike trains. PLoS Comput Biol 7:e1002305 [Journal] [PubMed]
Litwin-Kumar A, Rosenbaum R, Doiron B (2016) Inhibitory stabilization and visual coding in cortical circuits with multiple interneuron subtypes. J Neurophysiol 115:1399-409 [Journal] [PubMed]
Ma Y, Hu H, Berrebi AS, Mathers PH, Agmon A (2006) Distinct subtypes of somatostatin-containing neocortical interneurons revealed in transgenic mice. J Neurosci 26:5069-82 [Journal] [PubMed]
Markram H, Toledo-Rodriguez M, Wang Y, Gupta A, Silberberg G, Wu C (2004) Interneurons of the neocortical inhibitory system. Nat Rev Neurosci 5:793-807 [Journal] [PubMed]
Meyer HS, Wimmer VC, Oberlaender M, de Kock CP, Sakmann B, Helmstaedter M (2010) Number and laminar distribution of neurons in a thalamocortical projection column of rat vibrissal cortex. Cereb Cortex 20:2277-86 [Journal] [PubMed]
Naud R, Gerstner W (2012) Coding and decoding with adapting neurons: a population approach to the peri-stimulus time histogram. PLoS Comput Biol 8:e1002711 [Journal] [PubMed]
Ocker GK, Doiron B (2014) Kv7 channels regulate pairwise spiking covariability in health and disease. J Neurophysiol 112:340-52 [Journal] [PubMed]
Ocker GK, Hu Y, Buice MA, Doiron B, Josic K, Rosenbaum R, Shea-Brown E (2017) From the statistics of connectivity to the statistics of spike times in neuronal networks. Curr Opin Neurobiol 46:109-119 [Journal] [PubMed]
Packer AM, Yuste R (2011) Dense, unspecific connectivity of neocortical parvalbumin-positive interneurons: a canonical microcircuit for inhibition? J Neurosci 31:13260-71 [Journal] [PubMed]
Pfeffer CK, Xue M, He M, Huang ZJ, Scanziani M (2013) Inhibition of inhibition in visual cortex: the logic of connections between molecularly distinct interneurons. Nat Neurosci 16:1068-76 [Journal] [PubMed]
Poulet JF, Petersen CC (2008) Internal brain state regulates membrane potential synchrony in barrel cortex of behaving mice. Nature 454:881-5 [Journal] [PubMed]
Press WH, Flannery BP, Teukolsky SA, Vetterling WT (2007) Numerical recipes: the art of scientific computing 3rd edition
Richardson MJ (2009) Dynamics of populations and networks of neurons with voltage-activated and calcium-activated currents. Phys Rev E Stat Nonlin Soft Matter Phys 80:021928 [Journal] [PubMed]
Robinson HP, Kawai N (1993) Injection of digitally synthesized synaptic conductance transients to measure the integrative properties of neurons. J Neurosci Methods 49:157-65 [PubMed]
Shea-Brown E, Josic K, de la Rocha J, Doiron B (2008) Correlation and synchrony transfer in integrate-and-fire neurons: basic properties and consequences for coding. Phys Rev Lett 100:108102 [Journal] [PubMed]
Shinomoto S, Shima K, Tanji J (2003) Differences in spiking patterns among cortical neurons. Neural Comput 15:2823-42 [Journal] [PubMed]
Silberberg G, Markram H (2007) Disynaptic inhibition between neocortical pyramidal cells mediated by Martinotti cells. Neuron 53:735-46 [Journal] [PubMed]
Sippy T, Yuste R (2013) Decorrelating action of inhibition in neocortical networks. J Neurosci 33:9813-30 [Journal] [PubMed]
Spruston N (2008) Pyramidal neurons: dendritic structure and synaptic integration. Nat Rev Neurosci 9:206-21 [Journal] [PubMed]
Steinmetz PN, Manwani A, Koch C, London M, Segev I (2000) Subthreshold voltage noise due to channel fluctuations in active neuronal membranes. J Comput Neurosci 9:133-48 [PubMed]
Stuart GJ, Sakmann B (1994) Active propagation of somatic action potentials into neocortical pyramidal cell dendrites. Nature 367:69-72 [Journal] [PubMed]
Tateno T, Robinson HP (2009) Integration of broadband conductance input in rat somatosensory cortical inhibitory interneurons: an inhibition-controlled switch between intrinsic and input-driven spiking in fast-spiking cells. J Neurophysiol 101:1056-72 [Journal] [PubMed]
Testa-Silva G, Verhoog MB, Linaro D, de Kock CP, Baayen JC, Meredith RM, De Zeeuw CI, Giugliano M, Mansvelder HD (2014) High bandwidth synaptic communication and frequency tracking in human neocortex. PLoS Biol 12:e1002007 [Journal] [PubMed]
Tremblay R, Lee S, Rudy B (2016) GABAergic Interneurons in the Neocortex: From Cellular Properties to Circuits. Neuron 91:260-92 [Journal] [PubMed]
Tuckwell HC (1989) Stochastic Processes In The Neurosciences
Uhlenbeck GE, Ornstein LS (1930) On the theory of Brownian motion Phys Rev 36:823-841 [Journal]
Wang Y, Gupta A, Toledo-Rodriguez M, Wu CZ, Markram H (2002) Anatomical, physiological, molecular and circuit properties of nest basket cells in the developing somatosensory cortex. Cereb Cortex 12:395-410 [PubMed]
Xu NL, Harnett MT, Williams SR, Huber D, O'Connor DH, Svoboda K, Magee JC (2012) Nonlinear dendritic integration of sensory and motor input during an active sensing task. Nature 492:247-51 [Journal] [PubMed]
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