Citation Relationships

Legends: Link to a Model Reference cited by multiple papers


Bi GQ, Poo MM (1998) Synaptic modifications in cultured hippocampal neurons: dependence on spike timing, synaptic strength, and postsynaptic cell type. J Neurosci 18:10464-72 [PubMed]

References and models cited by this paper

References and models that cite this paper

Abbott LF, Nelson SB (2000) Synaptic plasticity: taming the beast. Nat Neurosci 3 Suppl:1178-83 [Journal] [PubMed]
Acker CD, Antic SD (2009) Quantitative assessment of the distributions of membrane conductances involved in action potential backpropagation along basal dendrites. J Neurophysiol 101:1524-41 [Journal] [PubMed]
   Excitability of PFC Basal Dendrites (Acker and Antic 2009) [Model]
Acker CD, White JA (2007) Roles of IA and morphology in action potential propagation in CA1 pyramidal cell dendrites. J Comput Neurosci 23:201-16 [Journal] [PubMed]
   Roles of I(A) and morphology in AP prop. in CA1 pyramidal cell dendrites (Acker and White 2007) [Model]
Aoki T, Aoyagi T (2007) Synchrony-induced switching behavior of spike pattern attractors created by spike-timing-dependent plasticity. Neural Comput 19:2720-38 [Journal] [PubMed]
Appleby PA, Elliott T (2005) Synaptic and temporal ensemble interpretation of spike-timing-dependent plasticity. Neural Comput 17:2316-36 [Journal] [PubMed]
Appleby PA, Elliott T (2006) Stable competitive dynamics emerge from multispike interactions in a stochastic model of spike-timing-dependent plasticity. Neural Comput 18:2414-64 [Journal] [PubMed]
Appleby PA, Elliott T (2007) Multispike interactions in a stochastic model of spike-timing-dependent plasticity. Neural Comput 19:1362-99 [Journal] [PubMed]
Badoual M, Zou Q, Davison AP, Rudolph M, Bal T, Frégnac Y, Destexhe A (2006) Biophysical and phenomenological models of multiple spike interactions in spike-timing dependent plasticity. Int J Neural Syst 16:79-97 [Journal] [PubMed]
   Biophysical and phenomenological models of spike-timing dependent plasticity (Badoual et al. 2006) [Model]
Baker JL, Olds JL (2007) Theta phase precession emerges from a hybrid computational model of a CA3 place cell. Cogn Neurodyn 1:237-48 [Journal] [PubMed]
   Theta phase precession in a model CA3 place cell (Baker and Olds 2007) [Model]
Banerjee A (2006) On the sensitive dependence on initial conditions of the dynamics of networks of spiking neurons. J Comput Neurosci 20:321-48 [Journal] [PubMed]
Bohte SM, Mozer MC (2007) Reducing the variability of neural responses: a computational theory of spike-timing-dependent plasticity. Neural Comput 19:371-403 [Journal] [PubMed]
Bono J, Clopath C (2017) Modeling somatic and dendritic spike mediated plasticity at the single neuron and network level. Nat Commun 8:706 [Journal] [PubMed]
   Modeling dendritic spikes and plasticity (Bono and Clopath 2017) [Model]
Brzosko Z, Zannone S, Schultz W, Clopath C, Paulsen O (2017) Sequential neuromodulation of Hebbian plasticity offers mechanism for effective reward-based navigation. Elife [Journal] [PubMed]
   Sequential neuromodulation of Hebbian plasticity in reward-based navigation (Brzosko et al 2017) [Model]
Buchs NJ, Senn W (2002) Spike-based synaptic plasticity and the emergence of direction selective simple cells: simulation results. J Comput Neurosci 13:167-86 [PubMed]
Burkitt AN, Meffin H, Grayden DB (2004) Spike-timing-dependent plasticity: the relationship to rate-based learning for models with weight dynamics determined by a stable fixed point. Neural Comput 16:885-940 [Journal] [PubMed]
Cai Y, Gavornik JP, Cooper LN, Yeung LC, Shouval HZ (2007) Effect of stochastic synaptic and dendritic dynamics on synaptic plasticity in visual cortex and hippocampus. J Neurophysiol 97:375-86 [Journal] [PubMed]
Cannon RC, Hasselmo ME, Koene RA (2003) From biophysics to behavior: Catacomb2 and the design of biologically-plausible models for spatial navigation. Neuroinformatics 1:3-42 [Journal] [PubMed]
   Biologically-plausible models for spatial navigation (Cannon et al 2003) [Model]
Eguchi A, Neymotin SA, Stringer SM (2014) Color opponent receptive fields self-organize in a biophysical model of visual cortex via spike-timing dependent plasticity Front. Neural Circuits 8:16 [Journal] [PubMed]
   Simulated cortical color opponent receptive fields self-organize via STDP (Eguchi et al., 2014) [Model]
Florian RV (2007) Reinforcement learning through modulation of spike-timing-dependent synaptic plasticity. Neural Comput 19:1468-502 [Journal] [PubMed]
Franks KM, Sejnowski TJ (2002) Complexity of calcium signaling in synaptic spines. Bioessays 24:1130-44 [Journal] [PubMed]
Gerkin RC, Lau PM, Nauen DW, Wang YT, Bi GQ (2007) Modular competition driven by NMDA receptor subtypes in spike-timing-dependent plasticity. J Neurophysiol 97:2851-62 [Journal] [PubMed]
   STDP and NMDAR Subunits (Gerkin et al. 2007) [Model]
Gerstner W, Kistler WM (2002) Mathematical formulations of Hebbian learning. Biol Cybern 87:404-15 [Journal] [PubMed]
Gilmanov IR, Samigullin DV, Vyskocil F, Nikolsky EE, Bukharaeva EA (2008) Modeling of quantal neurotransmitter release kinetics in the presence of fixed and mobile calcium buffers. J Comput Neurosci 25:296-307 [Journal] [PubMed]
   Quantal neurotransmitter release kinetics with fixed and mobile Ca2+ buffers (Gilmanov et al. 2008) [Model]
Gilson M, Masquelier T, Hugues E (2011) STDP allows fast rate-modulated coding with Poisson-like spike trains. PLoS Comput Biol 7:e1002231 [Journal] [PubMed]
   STDP allows fast rate-modulated coding with Poisson-like spike trains (Gilson et al. 2011) [Model]
Golding NL, Kath WL, Spruston N (2001) Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites. J Neurophysiol 86:2998-3010 [Journal] [PubMed]
   Dichotomy of action-potential backpropagation in CA1 pyramidal neuron dendrites (Golding et al 2001) [Model]
Górski T, Veltz R, Galtier M, Fragnaud H, Goldman JS, Telenczuk B, Destexhe A (2018) Dendritic sodium spikes endow neurons with inverse firing rate response to correlated synaptic activity. J Comput Neurosci 45:223-234 [Journal] [PubMed]
   Response to correlated synaptic input for HH/IF point neuron vs with dendrite (Górski et al 2018) [Model]
Graupner M, Brunel N (2007) STDP in a bistable synapse model based on CaMKII and associated signaling pathways. PLoS Comput Biol 3:e221 [Journal] [PubMed]
   CaMKII system exhibiting bistability with respect to calcium (Graupner and Brunel 2007) [Model]
Graupner M, Brunel N (2012) Calcium-based plasticity model explains sensitivity of synaptic changes to spike pattern, rate, and dendritic location. Proc Natl Acad Sci U S A 109:3991-6 [Journal] [PubMed]
Guyonneau R, VanRullen R, Thorpe SJ (2005) Neurons tune to the earliest spikes through STDP. Neural Comput 17:859-79 [Journal] [PubMed]
Hardie JB, Pearce RA (2006) Active and passive membrane properties and intrinsic kinetics shape synaptic inhibition in hippocampal CA1 pyramidal neurons. J Neurosci 26:8559-69 [Journal] [PubMed]
Hardingham NR, Hardingham GE, Fox KD, Jack JJ (2007) Presynaptic efficacy directs normalization of synaptic strength in layer 2/3 rat neocortex after paired activity. J Neurophysiol 97:2965-75 [Journal] [PubMed]
Hiratani N, Fukai T (2017) Detailed Dendritic Excitatory/Inhibitory Balance through Heterosynaptic Spike-Timing-Dependent Plasticity. J Neurosci 37:12106-12122 [Journal] [PubMed]
   Heterosynaptic Spike-Timing-Dependent Plasticity (Hiratani & Fukai 2017) [Model]
Hopfield JJ, Brody CD (2001) What is a moment? Transient synchrony as a collective mechanism for spatiotemporal integration. Proc Natl Acad Sci U S A 98:1282-7 [Journal] [PubMed]
   Hopfield and Brody model (Hopfield, Brody 2000) (NEURON+python) [Model]
   Hopfield and Brody model (Hopfield, Brody 2000) [Model]
Hosaka R, Araki O, Ikeguchi T (2008) STDP provides the substrate for igniting synfire chains by spatiotemporal input patterns. Neural Comput 20:415-35 [Journal] [PubMed]
Hoshino O (2004) Neuronal bases of perceptual learning revealed by a synaptic balance scheme. Neural Comput 16:563-94 [Journal] [PubMed]
Hu W, Tian C, Li T, Yang M, Hou H, Shu Y (2009) Distinct contributions of Na(v)1.6 and Na(v)1.2 in action potential initiation and backpropagation. Nat Neurosci 12:996-1002 [Journal] [PubMed]
   Action Potential initiation and backpropagation in Neocortical L5 Pyramidal Neuron (Hu et al. 2009) [Model]
Iannella N, Tanaka S (2006) Synaptic efficacy cluster formation across the dendrite via STDP. Neurosci Lett 403:24-9 [Journal] [PubMed]
Izhikevich EM (2007) Solving the distal reward problem through linkage of STDP and dopamine signaling. Cereb Cortex 17:2443-52 [Journal] [PubMed]
   Linking STDP and Dopamine action to solve the distal reward problem (Izhikevich 2007) [Model]
Jedrzejewska-Szmek J, Damodaran S, Dorman DB, Blackwell KT (2017) Calcium dynamics predict direction of synaptic plasticity in striatal spiny projection neurons. Eur J Neurosci 45:1044-1056 [Journal] [PubMed]
   Striatal Spiny Projection Neuron (SPN) plasticity rule (Jedrzejewska-Szmek et al 2016) [Model]
Jun JK, Jin DZ (2007) Development of neural circuitry for precise temporal sequences through spontaneous activity, axon remodeling, and synaptic plasticity. PLoS One 2:e723 [Journal] [PubMed]
   Formation of synfire chains (Jun and Jin 2007) [Model]
Kampa BM, Clements J, Jonas P, Stuart GJ (2004) Kinetics of Mg2+ unblock of NMDA receptors: implications for spike-timing dependent synaptic plasticity. J Physiol 556:337-45 [Journal] [PubMed]
   Kinetic NMDA receptor model (Kampa et al 2004) [Model]
Kampa BM, Stuart GJ (2006) Calcium spikes in basal dendrites of layer 5 pyramidal neurons during action potential bursts. J Neurosci 26:7424-32 [Journal] [PubMed]
   Calcium spikes in basal dendrites (Kampa and Stuart 2006) [Model]
Karmarkar UR, Buonomano DV (2002) A model of spike-timing dependent plasticity: one or two coincidence detectors? J Neurophysiol 88:507-13 [Journal] [PubMed]
Karmarkar UR, Najarian MT, Buonomano DV (2002) Mechanisms and significance of spike-timing dependent plasticity. Biol Cybern 87:373-82 [Journal] [PubMed]
King PD, Zylberberg J, DeWeese MR (2013) Inhibitory interneurons decorrelate excitatory cells to drive sparse code formation in a spiking model of V1. J Neurosci 33:5475-85 [Journal] [PubMed]
   Inhibitory cells enable sparse coding in V1 model (King et al. 2013) [Model]
Legenstein R, Maass W (2011) Branch-specific plasticity enables self-organization of nonlinear computation in single neurons. J Neurosci 31:10787-802 [Journal] [PubMed]
Legenstein R, Pecevski D, Maass W (2008) A learning theory for reward-modulated spike-timing-dependent plasticity with application to biofeedback. PLoS Comput Biol 4:e1000180 [Journal] [PubMed]
   Reward modulated STDP (Legenstein et al. 2008) [Model]
Leibold C, Kempter R (2006) Memory capacity for sequences in a recurrent network with biological constraints. Neural Comput 18:904-41 [Journal] [PubMed]
Letzkus JJ, Kampa BM, Stuart GJ (2006) Learning rules for spike timing-dependent plasticity depend on dendritic synapse location. J Neurosci 26:10420-9 [Journal] [PubMed]
   STDP depends on dendritic synapse location (Letzkus et al. 2006) [Model]
Manita S, Ross WN (2010) IP(3) mobilization and diffusion determine the timing window of Ca(2+) release by synaptic stimulation and a spike in rat CA1 pyramidal cells. Hippocampus 20:524-39 [Journal] [PubMed]
Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML (2010) Postsynaptic signal transduction models for long-term potentiation and depression. Front Comput Neurosci 4:152 [Journal] [PubMed]
Masuda N, Kori H (2007) Formation of feedforward networks and frequency synchrony by spike-timing-dependent plasticity. J Comput Neurosci 22:327-45 [Journal] [PubMed]
Matsubara T, Torikai H (2016) An Asynchronous Recurrent Network of Cellular Automaton-Based Neurons and Its Reproduction of Spiking Neural Network Activities. IEEE Trans Neural Netw Learn Syst 27:836-52 [Journal] [PubMed]
Migliore M, Hoffman DA, Magee JC, Johnston D (1999) Role of an A-type K+ conductance in the back-propagation of action potentials in the dendrites of hippocampal pyramidal neurons. J Comput Neurosci 7:5-15 [Journal] [PubMed]
   CA1 pyramidal neuron (Migliore et al 1999) [Model]
Morrison A, Aertsen A, Diesmann M (2007) Spike-timing-dependent plasticity in balanced random networks. Neural Comput 19:1437-67 [Journal] [PubMed]
Morrison A, Mehring C, Geisel T, Aertsen AD, Diesmann M (2005) Advancing the boundaries of high-connectivity network simulation with distributed computing. Neural Comput 17:1776-801 [Journal] [PubMed]
Mozafari M, Kheradpisheh SR, Masquelier T, Nowzari-Dalini A, Ganjtabesh M (2018) First-Spike-Based Visual Categorization Using Reward-Modulated STDP IEEE Transactions on Neural Networks and Learning Systems :1-13 [Journal]
   First-Spike-Based Visual Categorization Using Reward-Modulated STDP (Mozafari et al. 2018) [Model]
Muller L, Brette R, Gutkin B (2011) Spike-timing dependent plasticity and feed-forward input oscillations produce precise and invariant spike phase-locking. Front Comput Neurosci 5:45 [Journal] [PubMed]
   STDP and oscillations produce phase-locking (Muller et al. 2011) [Model]
Müllner FE, Wierenga CJ, Bonhoeffer T (2015) Precision of Inhibition: Dendritic Inhibition by Individual GABAergic Synapses on Hippocampal Pyramidal Cells Is Confined in Space and Time. Neuron 87:576-89 [Journal] [PubMed]
   CA1 pyramidal neuron: dendritic Ca2+ inhibition (Muellner et al. 2015) [Model]
O'Donnell C, Nolan MF, van Rossum MC (2011) Dendritic spine dynamics regulate the long-term stability of synaptic plasticity. J Neurosci 31:16142-56 [Journal] [PubMed]
   CA1 pyramidal neuron dendritic spine with plasticity (O`Donnell et al. 2011) [Model]
Pedrosa V, Clopath C (2017) The role of neuromodulators in cortical plasticity. A computational perspective. Front. Synaptic Neurosci. 8:38 [Journal]
   A simple model of neuromodulatory state-dependent synaptic plasticity (Pedrosa and Clopath, 2016) [Model]
Porr B, Wörgötter F (2007) Learning with "relevance": using a third factor to stabilize Hebbian learning. Neural Comput 19:2694-719 [Journal] [PubMed]
Raudies F, Hasselmo ME (2014) A model of hippocampal spiking responses to items during learning of a context-dependent task. Front Syst Neurosci 8:178 [Journal] [PubMed]
   Hippocampal spiking model for context dependent behavior (Raudies & Hasselmo 2014) [Model]
Ros E, Carrillo R, Ortigosa EM, Barbour B, Agís R (2006) Event-driven simulation scheme for spiking neural networks using lookup tables to characterize neuronal dynamics. Neural Comput 18:2959-93 [Journal] [PubMed]
Rudolph M, Destexhe A (2003) Tuning neocortical pyramidal neurons between integrators and coincidence detectors. J Comput Neurosci 14:239-51 [PubMed]
Sadeh S, Clopath C, Rotter S (2015) Emergence of Functional Specificity in Balanced Networks with Synaptic Plasticity. PLoS Comput Biol 11:e1004307 [Journal] [PubMed]
   Functional balanced networks with synaptic plasticity (Sadeh et al, 2015) [Model]
Schulz R, Reggia JA (2004) Temporally asymmetric learning supports sequence processing in multi-winner self-organizing maps. Neural Comput 16:535-61 [Journal] [PubMed]
Sejnowski TJ, Destexhe A (2000) Why do we sleep? Brain Res 886:208-223 [PubMed]
Shen YS, Gao H, Yao H (2005) Spike timing-dependent synaptic plasticity in visual cortex: a modeling study. J Comput Neurosci 18:25-39 [Journal] [PubMed]
Siekmeier PJ, Hasselmo ME, Howard MW, Coyle J (2007) Modeling of context-dependent retrieval in hippocampal region CA1: implications for cognitive function in schizophrenia. Schizophr Res 89:177-90 [Journal] [PubMed]
Sterratt D, Graham B, Gillies A, Willshaw D (2011) Principles of Computational Modelling in Neuroscience, Cambridge University Press :1-401 [Journal]
   Principles of Computational Modelling in Neuroscience (Book) (Sterratt et al. 2011) [Model]
Sterratt DC, van Ooyen A (2004) Does a dendritic democracy need a ruler? Neurocomputing 58:437-442 [Journal]
Stuart GJ, Häusser M (2001) Dendritic coincidence detection of EPSPs and action potentials. Nat Neurosci 4:63-71 [Journal] [PubMed]
Swiercz W, Cios KJ, Staley K, Kurgan L, Accurso F, Sagel S (2006) A new synaptic plasticity rule for networks of spiking neurons. IEEE Trans Neural Netw 17:94-105 [Journal] [PubMed]
Talathi SS, Abarbanel HD, Ditto WL (2008) Temporal spike pattern learning. Phys Rev E Stat Nonlin Soft Matter Phys 78:031918 [Journal] [PubMed]
Tamosiunaite M, Porr B, Wörgötter F (2007) Self-influencing synaptic plasticity: recurrent changes of synaptic weights can lead to specific functional properties. J Comput Neurosci 23:113-27 [Journal] [PubMed]
   Self-influencing synaptic plasticity (Tamosiunaite et al. 2007) [Model]
Tiesinga PH, Toups JV (2005) The possible role of spike patterns in cortical information processing. J Comput Neurosci 18:275-86 [Journal] [PubMed]
Tonnelier A, Belmabrouk H, Martinez D (2007) Event-driven simulations of nonlinear integrate-and-fire neurons. Neural Comput 19:3226-38 [Journal] [PubMed]
Toyoizumi T, Pfister JP, Aihara K, Gerstner W (2007) Optimality model of unsupervised spike-timing-dependent plasticity: synaptic memory and weight distribution. Neural Comput 19:639-71 [Journal] [PubMed]
Troyer TW, Doupe AJ (2000) An associational model of birdsong sensorimotor learning I. Efference copy and the learning of song syllables. J Neurophysiol 84:1204-23 [Journal] [PubMed]
Troyer TW, Doupe AJ (2000) An associational model of birdsong sensorimotor learning II. Temporal hierarchies and the learning of song sequence. J Neurophysiol 84:1224-39 [Journal] [PubMed]
Urakubo H, Aihara T, Kuroda S, Watanabe M, Kondo S (2004) Spatial localization of synapses required for supralinear summation of action potentials and EPSPs. J Comput Neurosci 16:251-65 [Journal] [PubMed]
Urakubo H, Honda M, Froemke RC, Kuroda S (2008) Requirement of an allosteric kinetics of NMDA receptors for spike timing-dependent plasticity. J Neurosci 28:3310-23 [Journal] [PubMed]
   An allosteric kinetics of NMDARs in STDP (Urakubo et al. 2008) [Model]
Vasilaki E, Giugliano M (2014) Emergence of connectivity motifs in networks of model neurons with short- and long-term plastic synapses. PLoS One 9:e84626 [Journal] [PubMed]
   Emergence of Connectivity Motifs in Networks of Model Neurons (Vasilaki, Giugliano 2014) [Model]
Veredas FJ, Vico FJ, Alonso JM (2005) Factors determining the precision of the correlated firing generated by a monosynaptic connection in the cat visual pathway. J Physiol 567:1057-78 [Journal] [PubMed]
Wagatsuma H, Yamaguchi Y (2004) Cognitive map formation through sequence encoding by theta phase precession. Neural Comput 16:2665-97 [Journal] [PubMed]
Watanabe S, Hoffman DA, Migliore M, Johnston D (2002) Dendritic K+ channels contribute to spike-timing dependent long-term potentiation in hippocampal pyramidal neurons. Proc Natl Acad Sci U S A 99:8366-71 [Journal] [PubMed]
   CA1 pyramidal neuron: conditional boosting of dendritic APs (Watanabe et al 2002) [Model]
Wilmes KA, Sprekeler H, Schreiber S (2016) Inhibition as a Binary Switch for Excitatory Plasticity in Pyramidal Neurons. PLoS Comput Biol 12:e1004768 [Journal] [PubMed]
   Inhibition of bAPs and Ca2+ spikes in a multi-compartment pyramidal neuron model (Wilmes et al 2016) [Model]
Woo B, Shin D, Yang D, Choi J (2005) Reduced model and simulation of neuron with passive dendritic cable: an eigenfunction expansion approach. J Comput Neurosci 19:379-97 [Journal] [PubMed]
Wörgötter F, Porr B (2005) Temporal sequence learning, prediction, and control: a review of different models and their relation to biological mechanisms. Neural Comput 17:245-319 [Journal] [PubMed]
Yoshioka M (2002) Spike-timing-dependent learning rule to encode spatiotemporal patterns in a network of spiking neurons. Phys Rev E Stat Nonlin Soft Matter Phys 65:011903 [Journal] [PubMed]
Yu X, Shouval HZ, Knierim JJ (2008) A biophysical model of synaptic plasticity and metaplasticity can account for the dynamics of the backward shift of hippocampal place fields. J Neurophysiol 100:983-92 [Journal] [PubMed]
Zannone S, Brzosko Z, Paulsen O, Clopath C (2018) Acetylcholine-modulated plasticity in reward-driven navigation: a computational study. Sci Rep 8:9486 [Journal] [PubMed]
   Acetylcholine-modulated plasticity in reward-driven navigation (Zannone et al 2018) [Model]
Zhou YD, Acker CD, Netoff TI, Sen K, White JA (2005) Increasing Ca2+ transients by broadening postsynaptic action potentials enhances timing-dependent synaptic depression. Proc Natl Acad Sci U S A 102:19121-5 [Journal] [PubMed]
Zou Q, Bornat Y, Tomas J, Renaud S, Destexhe A (2006) Real-time simulations of networks of Hodgkin-Huxley neurons using analog circuits Neurocomputing 69:1137-1140
(98 refs)