| No. | Simulation Environment | Homepage | Local | Web Link | Total |
|---|
| 1 | AnimatLab v1 |  | 2 | 0 | 2 |
| 2 | BETSE (web link to model) | | 0 | 1 | 1 |
| 3 | BioPAX | | 0 | 1 | 1 |
| 4 | Brian | | 35 | 15 | 50 |
| 5 | Brian 2 | | 15 | 5 | 20 |
| 6 | C or C++ program | | 118 | 33 | 151 |
| 7 | C# | | 1 | 0 | 1 |
| 8 | CalC Calcium Calculator | | 1 | 7 | 8 |
| 9 | Catacomb | | 0 | 1 | 1 |
| 10 | CellDesigner | | 2 | 0 | 2 |
| 11 | CellExcite | | 1 | 0 | 1 |
| 12 | CellML | | 0 | 13 | 13 |
| 13 | Chemesis | | 2 | 0 | 2 |
| 14 | cirsiumNeuron | | 1 | 0 | 1 |
| 15 | CNrun | | 1 | 0 | 1 |
| 16 | COMSOL | | 1 | 2 | 3 |
| 17 | CONTENT | | 2 | 0 | 2 |
| 18 | COPASI | | 1 | 0 | 1 |
| 19 | CSIM | | 1 | 3 | 4 |
| 20 | Cx3Dp | | 1 | 0 | 1 |
| 21 | Cython | | 4 | 0 | 4 |
| 22 | Dynamics Solver | | 1 | 0 | 1 |
| 23 | DynaSim | | 2 | 1 | 3 |
| 24 | EDLUT | | 3 | 0 | 3 |
| 25 | eFEL | | 1 | 0 | 1 |
| 26 | Emergent/PDP++ | | 3 | 0 | 3 |
| 27 | ERNST (Event Related Neuronal Simulation Tool) | | 0 | 1 | 1 |
| 28 | FORTRAN | | 16 | 1 | 17 |
| 29 | GENESIS | | 42 | 7 | 49 |
| 30 | GNUstep NeXTStep/OpenStep | | 1 | 0 | 1 |
| 31 | HSPICE | | 1 | 0 | 1 |
| 32 | IChMASCOT | | 0 | 0 | 0 |
| 33 | IDL | | 1 | 0 | 1 |
| 34 | IGOR Pro | | 4 | 0 | 4 |
| 35 | IGOR Pro (web link to model) | | 0 | 1 | 1 |
| 36 | IonChannelLab | | 1 | 0 | 1 |
| 37 | Java | | 9 | 5 | 14 |
| 38 | Javascript | | 1 | 0 | 1 |
| 39 | Javascript (web link to model) | | 0 | 0 | 0 |
| 40 | Julia | | 1 | 0 | 1 |
| 41 | Julia (web link to model) | | 0 | 3 | 3 |
| 42 | KInNeSS | | 1 | 1 | 2 |
| 43 | KNPsim (web link to method) | | 0 | 1 | 1 |
| 44 | L-Neuron | | 0 | 0 | 0 |
| 45 | LCG | | 1 | 0 | 1 |
| 46 | LFPy | | 3 | 0 | 3 |
| 47 | LFPy (web link to model) | | 0 | 1 | 1 |
| 48 | LibRoadRunner | | 1 | 0 | 1 |
| 49 | Lua | | 1 | 0 | 1 |
| 50 | MadSim | | 2 | 0 | 2 |
| 51 | Mathematica | | 7 | 3 | 10 |
| 52 | MATLAB | | 347 | 83 | 430 |
| 53 | MCell | | 5 | 0 | 5 |
| 54 | MOOSE/PyMOOSE | | 6 | 1 | 7 |
| 55 | MVASpike | | 1 | 0 | 1 |
| 56 | MySQL | | 0 | 1 | 1 |
| 57 | NCS | | 1 | 0 | 1 |
| 58 | Nengo | | 2 | 0 | 2 |
| 59 | Neosim | | 0 | 0 | 0 |
| 60 | NEST | | 18 | 3 | 21 |
| 61 | NetPyNE | | 3 | 0 | 3 |
| 62 | Network | | 4 | 0 | 4 |
| 63 | NeuGen | | 0 | 0 | 0 |
| 64 | neuroConstruct | | 2 | 4 | 6 |
| 65 | neurolib | | 0 | 0 | 0 |
| 66 | neurolib (web link to model) | | 0 | 1 | 1 |
| 67 | NeuroML | | 3 | 5 | 8 |
| 68 | NEURON | | 719 | 58 | 777 |
| 69 | NeuronC | | 0 | 1 | 1 |
| 70 | NeuronetExperimenter | | 0 | 1 | 1 |
| 71 | Neuronify | | 0 | 1 | 1 |
| 72 | NEURONPM | | 0 | 1 | 1 |
| 73 | Neuronvisio | | 0 | 1 | 1 |
| 74 | NeuroRD | | 7 | 0 | 7 |
| 75 | ngspice | | 1 | 0 | 1 |
| 76 | NSL | | 0 | 0 | 0 |
| 77 | NSM | | 0 | 1 | 1 |
| 78 | Octave | | 2 | 0 | 2 |
| 79 | parplex | | 2 | 0 | 2 |
| 80 | Pascal | | 0 | 1 | 1 |
| 81 | Pascal/Delphi | | 3 | 0 | 3 |
| 82 | PCSIM | | 1 | 0 | 1 |
| 83 | PGENESIS | | 3 | 0 | 3 |
| 84 | pHHotoreceptor | | 1 | 0 | 1 |
| 85 | PSICS | | 1 | 0 | 1 |
| 86 | PSpice | | 2 | 0 | 2 |
| 87 | PyNN | | 5 | 0 | 5 |
| 88 | Python | | 238 | 56 | 294 |
| 89 | QBasic/QuickBasic/Turbo Basic/VBA | | 3 | 0 | 3 |
| 90 | QuB | | 1 | 0 | 1 |
| 91 | R | | 6 | 3 | 9 |
| 92 | ReMoto | | 0 | 1 | 1 |
| 93 | SABER | | 1 | 0 | 1 |
| 94 | SBML | | 2 | 3 | 5 |
| 95 | SciLab | | 2 | 2 | 4 |
| 96 | Simulink | | 13 | 0 | 13 |
| 97 | SNNAP | | 22 | 0 | 22 |
| 98 | Snnet | | 0 | 0 | 0 |
| 99 | Snudda | | 0 | 1 | 1 |
| 100 | SpiNNaker | | 2 | 0 | 2 |
| 101 | Sspice Symbolic SPICE | | 1 | 0 | 1 |
| 102 | STEPS | | 7 | 2 | 9 |
| 103 | Surf-Hippo | | 0 | 0 | 0 |
| 104 | Synthesis | | 0 | 0 | 0 |
| 105 | T2N | | 0 | 1 | 1 |
| 106 | The Virtual Brain | | 0 | 0 | 0 |
| 107 | The Virtual Brain (web link to model) | | 0 | 1 | 1 |
| 108 | The Virtual Mouse Brain (TVMB) | | 0 | 1 | 1 |
| 109 | Topographica | | 1 | 1 | 2 |
| 110 | Trentool | | 2 | 0 | 2 |
| 111 | VERTEX | | 1 | 0 | 1 |
| 112 | Virtual Cell | | 0 | 4 | 4 |
| 113 | XML | | 0 | 4 | 4 |
| 114 | XNBC | | 0 | 0 | 0 |
| 115 | XPP | | 110 | 17 | 127 |
| 116 | Yale HMM | | 1 | 0 | 1 |
