Olfactory bulb cluster formation (Migliore et al. 2010)

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Accession:127995
Functional roles of distributed synaptic clusters in the mitral-granule cell network of the olfactory bulb.
Reference:
1 . Migliore M, Hines ML, McTavish TS, Shepherd GM (2010) Functional roles of distributed synaptic clusters in the mitral-granule cell network of the olfactory bulb. Front Integr Neurosci 4:122 [PubMed]
Model Information (Click on a link to find other models with that property)
Model Type: Realistic Network;
Brain Region(s)/Organism: Olfactory bulb;
Cell Type(s): Olfactory bulb main mitral GLU cell; Olfactory bulb main interneuron granule MC GABA cell;
Channel(s): I Na,t; I K;
Gap Junctions:
Receptor(s): AMPA;
Gene(s):
Transmitter(s):
Simulation Environment: NEURON;
Model Concept(s): Action Potential Initiation; Short-term Synaptic Plasticity; Olfaction;
Implementer(s): Hines, Michael [Michael.Hines at Yale.edu]; Migliore, Michele [Michele.Migliore at Yale.edu];
Search NeuronDB for information about:  Olfactory bulb main mitral GLU cell; Olfactory bulb main interneuron granule MC GABA cell; AMPA; I Na,t; I K;
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migliore2010
README
ampanmda.mod
fi.mod
kamt.mod *
kdrmt.mod *
naxn.mod *
ThreshDetect.mod *
.hg_archival.txt
6.2.3.2203.spk
allsynhinton.hoc *
clear.hoc *
connect.hoc
granule.hoc
iterator.hoc
lptiter.hoc
mgrs.hoc
mitral.hoc
mosinit.hoc
net-5mt-100-900.hoc
odors.txt
parinit.hoc
pattern.hoc
perfrun.hoc
show.hoc
somesyn.hoc *
start.hoc
start.ses *
stim-odors-AB-seq.hoc
weight_movie.hoc *
weight-forfig3-bulb1.dat
weightsave.hoc
                            
proc clear() {local i
	pc.gid_clear()
	for i=0, mgrs_list.count-1 {
		mgrs_list.object(i).clear()
	}
	mgrs_list.remove_all
	cells.remove_all()
	objref cell, stim_list
	if (name_declared("clear_weight_movie")) { execute("clear_weight_movie()") }
}

proc reload_onecell() {
	clear()
	one_gid_ = $1
	if ($1 != -1) {
		gidvec.resize(0)
		gidvec.append($1)
	}else{
		gidvec.resize(nmitral + ngranule - 1)
		gidvec.indgen()		
	}
	create_cells()
	connect_cells()
	create_stim()
	topology()
}

proc reload_wholenet() {local i, j
	clear()
	gidvec.resize(0)
	for i=0, nmitral-1 {gidvec.append(i)}
	for i=0, ngranule-1 {gidvec.append(nmitral+i)}
	create_cells()
	connect_cells()
	create_stim()
}


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